| Clone Name | rbast19d10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL035653.12|HS67E13 Human DNA sequence from clone RP1-67E13 on chromosome 6p24.3-25.3 Contains a novel pseudogene, part of a novel gene and CpG islands, complete sequence Length = 133765 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 acagaagcagatgaacacagc 119 ||||||||||||||||||||| Sbjct: 77231 acagaagcagatgaacacagc 77251
>emb|AJ251438.1|STE251438 Streptomyces tendae Tue901 nikI gene, nikJ gene, nikK gene, nikL gene, nikM gene, nikN gene, nikO gene, ORF1 and ORF2 Length = 11591 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 cggccggccaccgcggcaacc 266 ||||||||||||||||||||| Sbjct: 9514 cggccggccaccgcggcaacc 9534
>ref|NM_125803.3| Arabidopsis thaliana 1-phosphatidylinositol 4-kinase AT5G64070 mRNA, complete cds Length = 4426 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cattcctgatccatcagtcc 69 |||||||||||||||||||| Sbjct: 2848 cattcctgatccatcagtcc 2867
>gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome 9, complete sequence Length = 184017 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 acacagctgagctaactaca 132 |||||||||||||||||||| Sbjct: 160463 acacagctgagctaactaca 160444
>emb|AJ002685.1|ATPI4KG Arabidopsis thaliana mRNA for Phosphatidylinositol 4-Kinase Length = 4349 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cattcctgatccatcagtcc 69 |||||||||||||||||||| Sbjct: 2808 cattcctgatccatcagtcc 2827
>gb|AY139795.1| Arabidopsis thaliana At5g64070/MHJ24_5 mRNA, complete cds Length = 3366 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cattcctgatccatcagtcc 69 |||||||||||||||||||| Sbjct: 2304 cattcctgatccatcagtcc 2323
>gb|AF462854.1|AF462854 Arabidopsis thaliana phosphatidylinositol 4-kinase mRNA, complete cds Length = 4351 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cattcctgatccatcagtcc 69 |||||||||||||||||||| Sbjct: 2848 cattcctgatccatcagtcc 2867
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttcgccttcgacgccggtg 160 |||||||||||||||||||| Sbjct: 300168 cttcgccttcgacgccggtg 300149
>emb|BX005304.8| Mouse DNA sequence from clone RP23-328P5 on chromosome 2, complete sequence Length = 200574 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaaaacaagattactacatt 53 |||||||||||||||||||| Sbjct: 84228 aaaaacaagattactacatt 84247
>dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHJ24 Length = 48622 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cattcctgatccatcagtcc 69 |||||||||||||||||||| Sbjct: 14013 cattcctgatccatcagtcc 13994 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,041,470 Number of Sequences: 3902068 Number of extensions: 2041470 Number of successful extensions: 37250 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37214 Number of HSP's gapped (non-prelim): 36 length of query: 303 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 281 effective length of database: 17,147,199,772 effective search space: 4818363135932 effective search space used: 4818363135932 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)