| Clone Name | rbast19a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complete sequence Length = 165723 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 tgtatctaaaactcatcaa 38 ||||||||||||||||||| Sbjct: 17639 tgtatctaaaactcatcaa 17621
>gb|AC170425.1| Rhesus Macaque BAC CH250-10K16 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 153799 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 26 taaaactcatcaaatcac 43 |||||||||||||||||| Sbjct: 147988 taaaactcatcaaatcac 147971
>gb|AC025366.11| Homo sapiens chromosome 8, clone RP11-238I10, complete sequence Length = 157390 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 20 tgtatctaaaactcatca 37 |||||||||||||||||| Sbjct: 106129 tgtatctaaaactcatca 106146
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 26 taaaactcatcaaatcac 43 |||||||||||||||||| Sbjct: 658796 taaaactcatcaaatcac 658813
>gb|AC084290.15| Homo sapiens 12 BAC RP11-568G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55001 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 26 taaaactcatcaaatcac 43 |||||||||||||||||| Sbjct: 22121 taaaactcatcaaatcac 22138
>gb|AC154572.2| Mus musculus BAC clone RP23-392G15 from chromosome 13, complete sequence Length = 185090 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccatgtatctaaaactca 34 |||||||||||||||||| Sbjct: 13890 ccatgtatctaaaactca 13907
>gb|AC157528.2| Pan troglodytes BAC clone CH251-422M6 from chromosome unknown, complete sequence Length = 154857 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 26 taaaactcatcaaatcac 43 |||||||||||||||||| Sbjct: 149030 taaaactcatcaaatcac 149013
>gb|AC161620.5| Pan troglodytes BAC clone CH251-232H7 from chromosome unknown, complete sequence Length = 204271 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 26 taaaactcatcaaatcac 43 |||||||||||||||||| Sbjct: 109369 taaaactcatcaaatcac 109352
>gb|AY116500.1| Sterkiella histriomuscorum macronuclear telomerase gene, complete cds Length = 3642 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 26 taaaactcatcaaatcactcaa 47 |||||||||||| ||||||||| Sbjct: 39 taaaactcatcatatcactcaa 18
>gb|AF060230.1|AF060230 Oxytricha trifallax telomerase reverse transciptase (TERT) gene, complete cds Length = 3642 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 26 taaaactcatcaaatcactcaa 47 |||||||||||| ||||||||| Sbjct: 39 taaaactcatcatatcactcaa 18 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 284,574 Number of Sequences: 3902068 Number of extensions: 284574 Number of successful extensions: 72389 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72358 Number of HSP's gapped (non-prelim): 31 length of query: 48 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 28 effective length of database: 17,155,003,908 effective search space: 480340109424 effective search space used: 480340109424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)