>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC 3.6.1.-)|
          Length = 1401

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +2

Query: 131  TRAHTHSLGEAHLQTVHTHTARTHLYRLVVHKASSSQGPRLSGITTVPARYSTPL 295
            T  H+ +   A L T  ++  RTH Y++    +S +  P+ S +   P   S+PL
Sbjct: 1052 TTQHSSNQNPAGLTTKQSNLERTHSYKVPEKVSSGTNIPKKSAVMPSPGTSSSPL 1106

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +2

Query: 107 YMIHPDSRTRAHTHSLGEAHLQT-----VHTHTARTHL 205
           Y++HP +    HTH+    H+       +HTHT  THL
Sbjct: 55  YLLHPHTHVCTHTHTCTHTHIHASTHVCIHTHTF-THL 91

>LAMC1_MOUSE (P02468) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1607

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 215 PNDRDVCVLCVCVPSGDALPRESVCVPVFG 126
           PN  D C  C C P G  + ++S C PV G
Sbjct: 873 PNPADKCKACACNPYG-TVQQQSSCNPVTG 901

>QUEF_AQUAE (O67073) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 129

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 178 YRLEMRFPERVCVCPCSG 125
           Y +E+ FPE  C+CP SG
Sbjct: 30  YMIEITFPEFTCLCPRSG 47

>VME1_CVCAI (P36299) E1 glycoprotein precursor (Matrix glycoprotein) (Membrane|
           glycoprotein)
          Length = 262

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -1

Query: 141 CARVRESGWIMYQVLNGNYAW-----LTFT*LFERRPNVGWFV 28
           CA   E+G +++ + N N++W     +  T L   RP   WFV
Sbjct: 38  CASCFETGDLIWHLANWNFSWSVILIIFITVLQYGRPQFSWFV 80

>ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 162  RISRRYTHTQHAHISIVWSYTKLAALKDRACQALPQYQRG 281
            +I + Y H +   +SI   + KLAA++ +A   +  Y RG
Sbjct: 2639 KIRKHYLHLRATVVSIQRRHRKLAAVRTQAVICIQSYYRG 2678

>MDHP_PEA (P21528) Malate dehydrogenase [NADP], chloroplast precursor (EC|
           1.1.1.82) (NADP-MDH)
          Length = 441

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
 Frame = +1

Query: 235 LSRT---ALVRHYHSTSAVLHST 294
           LSRT    L RHYHST A LH T
Sbjct: 24  LSRTRTRTLPRHYHSTFAPLHRT 46

>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC5)
            (Subtilisin/kexin-like protease PC5) (PC6)
            (Subtilisin-like proprotein convertase 6) (SPC6)
          Length = 1877

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
 Frame = -2

Query: 266  W*CLTSAVLESC*L-CVRPNDRDVCVLCVCVPSGDALPRES----VCVPVFGNRDGSCIK 102
            W  +TS   E C   CV  +  D+C  C+  P    L  E      C   F  +DG C  
Sbjct: 1247 WPSVTSGSCEKCSEDCVSCSGADLCQQCLSQPDNTLLLHEGRCYHSCPEGFYAKDGVCEH 1306

Query: 101  C 99
            C
Sbjct: 1307 C 1307

>LAMC1_HUMAN (P11047) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1609

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 215 PNDRDVCVLCVCVPSGDALPRESVCVPVFG 126
           PN  D C  C C P G  + ++S C PV G
Sbjct: 875 PNPADKCKACNCNPYG-TMKQQSSCNPVTG 903


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,182,162
Number of Sequences: 219361
Number of extensions: 1143740
Number of successful extensions: 2545
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2543
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)