ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast18g07 |
|---|---|
| Clone Library Name | barley_pub |
>METC_ARATH (P53780) Cystathionine beta-lyase, chloroplast precursor (EC| 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase) Length = 464 Score = 80.1 bits (196), Expect = 1e-15 Identities = 38/51 (74%), Positives = 45/51 (88%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRSGP 130 IS+PCFMSHASIP+ VR+ RGLT+DLVRIS GIEDVDDLI+DLD A ++ P Sbjct: 413 ISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFP 463
>CGL_CAEEL (P55216) Putative cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 392 Score = 63.2 bits (152), Expect = 2e-10 Identities = 29/46 (63%), Positives = 38/46 (82%) Frame = -2 Query: 276 LPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALR 139 LP M+HAS+P+ R G+TD+L+RISVGIED+DDL+ADLD AL+ Sbjct: 341 LPSIMTHASVPAETRIVLGITDNLIRISVGIEDLDDLVADLDQALK 386
>CYS3_YEAST (P31373) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 393 Score = 55.1 bits (131), Expect = 5e-08 Identities = 25/48 (52%), Positives = 33/48 (68%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALR 139 + +P M+H IP R+ G+ DDLVRISVGIED DDL+ D+ AL+ Sbjct: 342 LEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALK 389
>CGL_MACFA (Q60HG7) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 405 Score = 54.3 bits (129), Expect = 8e-08 Identities = 24/49 (48%), Positives = 35/49 (71%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 + LP M+HAS+P R G++D L+R+SVG+ED DL+ DLD AL++ Sbjct: 348 VELPAIMTHASVPKNDRDVLGISDTLIRLSVGLEDEKDLLEDLDQALKA 396
>CGL_MOUSE (Q8VCN5) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 398 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/47 (51%), Positives = 33/47 (70%) Frame = -2 Query: 276 LPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 LP M+HAS+P R G+ D L+R+SVG+ED DL+ DLD AL++ Sbjct: 349 LPAIMTHASVPEKDRATLGINDTLIRLSVGLEDEQDLLEDLDRALKA 395
>METC_LACLC (P0A4K3) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 380 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/47 (48%), Positives = 35/47 (74%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYAL 142 I +P M+HASIP +R+E G+ D L+R+SVG+E ++DL+ D+ AL Sbjct: 331 IEVPAVMTHASIPKELREEIGIKDGLIRLSVGVEAIEDLLTDIKEAL 377
>METC_LACLA (P0A4K2) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 380 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/47 (48%), Positives = 35/47 (74%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYAL 142 I +P M+HASIP +R+E G+ D L+R+SVG+E ++DL+ D+ AL Sbjct: 331 IEVPAVMTHASIPKELREEIGIKDGLIRLSVGVEAIEDLLTDIKEAL 377
>CGL_RAT (P18757) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) (Probasin-related antigen) (PRB-RA) Length = 398 Score = 51.2 bits (121), Expect = 7e-07 Identities = 23/47 (48%), Positives = 33/47 (70%) Frame = -2 Query: 276 LPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 LP M+HAS+P R G++D L+R+SVG+ED DL+ DL AL++ Sbjct: 349 LPAIMTHASVPEKDRATLGISDTLIRLSVGLEDEKDLLEDLGQALKA 395
>METB_HELPY (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 380 Score = 50.8 bits (120), Expect = 9e-07 Identities = 23/46 (50%), Positives = 31/46 (67%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYA 145 + +P FM+HA IP R+ G+ D LVR+SVGIE DL+ DL+ A Sbjct: 330 VGIPAFMTHACIPKTQREAAGIRDGLVRLSVGIEHEQDLLEDLEQA 375
>CGL_HUMAN (P32929) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 405 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/47 (48%), Positives = 34/47 (72%) Frame = -2 Query: 276 LPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 LP M+HAS+ R G++D L+R+SVG+ED +DL+ DLD AL++ Sbjct: 350 LPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 396
>METB_HELPJ (Q9ZMW7) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 380 Score = 50.1 bits (118), Expect = 1e-06 Identities = 23/46 (50%), Positives = 30/46 (65%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYA 145 + +P M+HA IP R+ G+ D LVR+SVGIE DL+ DLD A Sbjct: 330 VGIPALMTHACIPKAQREAAGIRDGLVRLSVGIEHEQDLLEDLDQA 375
>STR3_YEAST (P53101) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 465 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/43 (55%), Positives = 31/43 (72%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADL 154 +S+PC MSHASI +RKER +DLVR+ GIE++ DL DL Sbjct: 358 LSMPCKMSHASIDPELRKERDFPEDLVRLCCGIENIVDLKKDL 400
>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)| Length = 398 Score = 47.8 bits (112), Expect = 7e-06 Identities = 21/46 (45%), Positives = 33/46 (71%) Frame = -2 Query: 273 PCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 P M+H+S R G+++ LVR+SVG+ED+DDL+AD+ AL++ Sbjct: 351 PASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396
>METB_HAEIN (P44502) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 369 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADL 154 I+ P +H IP R RG+T+ L+R SVGIEDV+D+ ADL Sbjct: 319 ITYPATQTHMDIPESERVARGITNTLLRFSVGIEDVEDIKADL 361
>METB_ECOLI (P00935) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 386 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/49 (44%), Positives = 31/49 (63%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 IS M+HA + R G+++ L+RIS GIED +DLIADL+ R+ Sbjct: 334 ISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382
>CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)| (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase) Length = 429 Score = 42.0 bits (97), Expect = 4e-04 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = -2 Query: 273 PCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYAL 142 P + +H + + G+T DL+R++VGIE +DD+IAD AL Sbjct: 383 PAYTTHLQLTDEEQISAGVTKDLIRVAVGIEHIDDIIADFAQAL 426
>METB_MYCTU (P66875) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 388 Score = 42.0 bits (97), Expect = 4e-04 Identities = 23/47 (48%), Positives = 30/47 (63%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYAL 142 I P M+HAS + + DDLVR+SVGIED+ DL+ DL+ AL Sbjct: 344 IEHPSAMTHASTAG---SQLEVPDDLVRLSVGIEDIADLLGDLEQAL 387
>METB_MYCLE (P46807) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 388 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/47 (51%), Positives = 29/47 (61%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYAL 142 I P M+HAS + + DDLVR+SVGIEDV DL+ DL AL Sbjct: 344 IEQPSAMTHASTTG---SQLEVPDDLVRLSVGIEDVGDLLCDLKQAL 387
>METB_MYCBO (P66876) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 388 Score = 42.0 bits (97), Expect = 4e-04 Identities = 23/47 (48%), Positives = 30/47 (63%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYAL 142 I P M+HAS + + DDLVR+SVGIED+ DL+ DL+ AL Sbjct: 344 IEHPSAMTHASTAG---SQLEVPDDLVRLSVGIEDIADLLGDLEQAL 387
>MET17_YEAST (P06106) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase| (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47) (OAS sulfhydrylase)] Length = 443 Score = 41.6 bits (96), Expect = 5e-04 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = -2 Query: 273 PCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 P F +H + + G+T DL+R+SVGIE +DD+IAD + + Sbjct: 391 PYFTTHKQLNDKEKLASGVTKDLIRVSVGIEFIDDIIADFQQSFET 436
>METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast precursor (EC| 2.5.1.48) (CGS) (O-succinylhomoserine (thiol)-lyase) Length = 563 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/49 (38%), Positives = 30/49 (61%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLDYALRS 136 + P MS+ +P R + G+ D+LVR S G+ED +D+ AD+ AL + Sbjct: 514 VDQPAIMSYWDLPQEERLKYGIKDNLVRFSFGVEDFEDVKADILQALEA 562
>MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase| (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47) (OAS sulfhydrylase)] Length = 443 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = -2 Query: 273 PCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLD 151 P F +H + + G+T DL+R+SVG E +DD+IAD + Sbjct: 390 PYFTTHQQLTDEEKLASGVTKDLIRVSVGTEFIDDIIADFE 430
>METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1.-) (OSH| sulfhydrylase) Length = 403 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -2 Query: 282 ISLPCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADL 154 I+ P SH + R G+ D L+R++VG+ED+DDL AD+ Sbjct: 354 IAHPATTSHGRLSPEDRARAGIGDSLIRVAVGLEDLDDLKADM 396
>CYSD_EMENI (P50125) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)| (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase) Length = 437 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = -2 Query: 273 PCFMSHASIPSLVRKERGLTDDLVRISVGIEDVDDLIADLD 151 P +H + R + G+T+D +RISVG E +DD+IAD + Sbjct: 384 PWSTTHEQLTDQERIDSGVTEDAIRISVGTEHIDDIIADFE 424
>METC_ECOLI (P06721) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 395 Score = 35.0 bits (79), Expect = 0.049 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = -2 Query: 207 LVRISVGIEDVDDLIADLD 151 L+R+ +G+EDVDDLIADLD Sbjct: 370 LIRLHIGLEDVDDLIADLD 388
>METC_HAEIN (P44527) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 396 Score = 34.3 bits (77), Expect = 0.084 Identities = 14/25 (56%), Positives = 20/25 (80%) Frame = -2 Query: 228 ERGLTDDLVRISVGIEDVDDLIADL 154 +R LT L+R+ +G E+VD+LIADL Sbjct: 364 KRNLTGSLIRVHIGFENVDELIADL 388
>YFHE_SCHPO (O42851) Hypothetical protein C23A1.14c in chromosome I| Length = 398 Score = 33.9 bits (76), Expect = 0.11 Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 5/47 (10%) Frame = -2 Query: 261 SHASIPSLVRKERGLTDD-----LVRISVGIEDVDDLIADLDYALRS 136 S S+ SL+ R +TD LVR+S+GIED DLIADL+ S Sbjct: 351 SLGSVESLIEWRR-MTDSKIDPRLVRLSIGIEDAADLIADLNRVFAS 396
>METC_SALTY (P18949) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 395 Score = 32.3 bits (72), Expect = 0.32 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -2 Query: 216 TDDLVRISVGIEDVDDLIADL 154 T LVR+ +G+E VDDLIADL Sbjct: 367 TGTLVRVHIGLESVDDLIADL 387
>CYSA_STRCO (Q59829) Putative cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 392 Score = 30.8 bits (68), Expect = 0.93 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = -2 Query: 213 DDLVRISVGIEDVDDLIADLDYAL 142 + +R+SVG ED DDL+ADL AL Sbjct: 364 EGFIRLSVGAEDPDDLVADLLRAL 387
>METC_BORAV (Q07703) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) (Osteotoxin) Length = 395 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -2 Query: 225 RGLTDDLVRISVGIEDVDDLIADLDYAL 142 +G +D LVR+ +G+E DLIADL AL Sbjct: 364 QGGSDALVRLHIGLESPADLIADLAQAL 391
>YHR2_YEAST (P38716) Hypothetical 42.4 kDa protein in CDC12-ORC6 intergenic| region Length = 378 Score = 30.0 bits (66), Expect = 1.6 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Frame = -2 Query: 261 SHASIPSLVRKERGLTDD-----LVRISVGIEDVDDLIADLDYALR 139 S I SLV + R +TD L+R+SVG E +DLI DL AL+ Sbjct: 328 SLGGIESLV-EWRAMTDPYIDQTLIRVSVGCESANDLIKDLASALK 372
>PRP31_YEAST (P49704) Pre-mRNA-splicing factor 31| Length = 494 Score = 28.9 bits (63), Expect = 3.5 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = -1 Query: 145 AQVRPSIEHTKSALWRSGFRFIKL*MRFELVIHLLNCYSNNKLLHEYL 2 AQ+ P I K L + FIKL F +I L+ SN KL+H +L Sbjct: 71 AQILPKIVDLKRILQQQEIDFIKLLPFFNEIIPLIK--SNIKLMHNFL 116
>MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)| Length = 942 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -2 Query: 231 KERGLTDDLVRISVG-IEDVDDLIADLDYAL 142 K R L DL RI G +E V DL++ DYAL Sbjct: 233 KSRDLAQDLGRIIRGSVEPVRDLLSQFDYAL 263
>MET7_NEUCR (P38675) Cystathionine gamma-synthase (EC 2.5.1.48)| (O-succinylhomoserine (thiol)-lyase) Length = 542 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = -2 Query: 231 KERGLTDDLVRISVGIEDVDDLIADLDYALR 139 ++ G+ +L+RISVG+E D+LI AL+ Sbjct: 503 EQYGVDRNLIRISVGLEGTDELINVFTRALK 533 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,056,801 Number of Sequences: 219361 Number of extensions: 680165 Number of successful extensions: 1834 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1818 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1834 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
