>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA 170
           IINTHIDILH+LA LLIEKETVDGEEFMSLFIDG+AEL+V+
Sbjct: 666 IINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS 706

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA 170
           II THIDILH+LA LLIEKETVDGEEFMSLFIDGQAEL+++
Sbjct: 676 IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS 716

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA*VA 161
           II THIDILH+LA LLIEKETVDGEEFMSLFIDG+AEL+++ V+
Sbjct: 667 IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYISWVS 710

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA 170
           II T IDILH+LA LLIEKETVDGEEFMSLFIDGQAEL+V+
Sbjct: 664 IITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS 704

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSL 203
           I+    +++ RL +LLIEKET+DGEEF  +
Sbjct: 581 IVQEQREVVDRLVDLLIEKETIDGEEFRQI 610

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 185
           I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 563 ILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 185
           I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 563 ILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -2

Query: 271 ILHRLANLLIEKETVDGEEFMSLFIDGQAEL 179
           IL +LA +L+EKETVD EE  +L  +  A+L
Sbjct: 582 ILDQLAEILVEKETVDSEELQTLLANNNAKL 612

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEK 236
           II THIDILH+LA LLIEK
Sbjct: 644 IITTHIDILHKLAQLLIEK 662

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFID 194
           II  +  ++ +L +LLIEKET+DG+EF  +  D
Sbjct: 582 IIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614

>TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein)
          Length = 275

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 42  VHFYKELYKHVCKNNIFTKSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 191
           V  ++E +    KN IF  S+W  QA   Y+R    G    TYA   + C
Sbjct: 9   VLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVC 58

>TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein PS4)
          Length = 276

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 78  KNNIFTKSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 191
           KN IF  S+W  QA   Y+R   +G    TYA   + C
Sbjct: 21  KNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVC 58

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEF 212
           I+  +  ++ RL +LLIEKET++G EF
Sbjct: 582 IVKDNRVVMDRLVDLLIEKETIEGNEF 608

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSL 203
           I++ +  ++ R+ N L+EKET++ +EFM +
Sbjct: 580 ILSQNRKLIDRVVNELVEKETIEAKEFMRI 609

>GDBB_WHEAT (P06659) Gamma-gliadin B precursor|
          Length = 291

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/62 (20%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 98  INVVPTSWTLV*PPKTYRA*RGDLCDKQLRLPVNEEAHEL-LPVHGLLLNQEVGEPVEDV 274
           +++V + W+++ PP   +  R   C +  ++P   +   +   VH +++ QE  E ++ V
Sbjct: 160 VSLVSSLWSIILPPSDCQVMRQQCCQQLAQIPQQLQCAAIHSVVHSIIMQQEQQEQLQGV 219

Query: 275 NV 280
            +
Sbjct: 220 QI 221

>DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +3

Query: 111 LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 278
           L+ GP  N+     H  A YA ++  CP  + L+N      SF+       L +    +M
Sbjct: 255 LEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 279 WV 284
           WV
Sbjct: 315 WV 316

>CR023_HUMAN (Q8NB54) Protein C18orf23|
          Length = 160

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 180 CLSHKSPRHALYVFGGYTRVQLVGTTLI**KCCFCKHVCIVPCK 49
           C +H +PR+ L +   YT  + +G  +     C C +VC+  C+
Sbjct: 33  CPAHPAPRNCLCMTVAYTGSRCLGACVC---VCVCLYVCVHVCE 73

>TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein)
          Length = 277

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 78  KNNIFTKSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 191
           K+ IF  S+W  +A   Y+R   +G    TYA   + C
Sbjct: 21  KDGIFHNSIWLERAAGVYHREARSGKYKLTYAEAKAVC 58

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFID 194
           I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 572 ILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFID 194
           I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 572 ILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVD 224
           I+N +IDILH +   LI+ ET+D
Sbjct: 563 ILNENIDILHAMKEALIKYETID 585

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVD 224
           I+N ++DILH + + LI+ ET+D
Sbjct: 563 ILNENLDILHAMKDALIKYETID 585

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 271 ILHRLANLLIEKETVDGEEFMSL 203
           ++ R+   L+EKET+DG+EF  L
Sbjct: 570 VMDRIVEELMEKETLDGKEFRQL 592

>DDC_CAVPO (P22781) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +3

Query: 111 LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 278
           L+ GP  N+ +   H  A YA ++  CP  + L++      SF+       L +    +M
Sbjct: 255 LEVGPICNQEEMWLHIDAAYAGSAFICPEFRHLLDGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 279 WV 284
           WV
Sbjct: 315 WV 316

>DDC_DROSI (O96567) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 510

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 114 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 242
           + GP  N+     H  A YA ++  CP  + LM    S  SF+
Sbjct: 290 ECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFN 332

>DDC_DROME (P05031) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 510

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 114 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 242
           + GP  N+     H  A YA ++  CP  + LM    S  SF+
Sbjct: 290 ECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFN 332

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 292 IINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 185
           I+  + D+L  +A  ++EKE ++GEE   L    QA
Sbjct: 587 ILEHNRDLLEAIAEKILEKEVIEGEELHHLLGQVQA 622

>YR706_MIMIV (Q5UNW2) Hypothetical protein R706|
          Length = 420

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 19  INRRTQCQYIFTRNYTNMFAKTTFLLN 99
           ++ +TQC+ IF+ +    FAKT + LN
Sbjct: 45  VSDQTQCENIFSEDVQKYFAKTFYKLN 71

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 289 INTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 188
           I TH +    +A  L++ ET+D ++ MSLF  G+
Sbjct: 603 IETHREQHKAIAEALLKYETLDAKQIMSLFKTGK 636

>MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 472

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 154 CPVCFRRLYEGPACRNHIDLVKMLFLQTC 68
           C  C  +L   P CR+ ++ V+ ++L TC
Sbjct: 405 CQNCAAQLQSCPVCRSEVEHVQHVYLPTC 433


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,194,591
Number of Sequences: 219361
Number of extensions: 711205
Number of successful extensions: 2200
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2200
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)