ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast18e02 |
|---|---|
| Clone Library Name | barley_pub |
>CXB2_SHEEP (P46691) Gap junction beta-2 protein (Connexin-26) (Cx26)| Length = 226 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 157 VVRPISSTLCFIRM*TTVNICFLLTMSKLCMCCYRVADGQICSP 26 V RP T+ + M IC LL +++LC R G+ P Sbjct: 182 VSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRFCSGKSKKP 225
>CXB2_PONPY (Q8MIT9) Gap junction beta-2 protein (Connexin-26) (Cx26)| Length = 226 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 157 VVRPISSTLCFIRM*TTVNICFLLTMSKLCMCCYRVADGQICSP 26 V RP T+ + M IC LL +++LC R G+ P Sbjct: 182 VSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGRSKKP 225
>CXB2_MACMU (Q8MIT8) Gap junction beta-2 protein (Connexin-26) (Cx26)| Length = 226 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 157 VVRPISSTLCFIRM*TTVNICFLLTMSKLCMCCYRVADGQICSP 26 V RP T+ + M IC LL +++LC R G+ P Sbjct: 182 VSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKKP 225
>CXB2_HYLLA (Q7JGL3) Gap junction beta-2 protein (Connexin-26) (Cx26)| Length = 226 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 157 VVRPISSTLCFIRM*TTVNICFLLTMSKLCMCCYRVADGQICSP 26 V RP T+ + M IC LL +++LC R G+ P Sbjct: 182 VSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKKP 225
>CXB2_HUMAN (P29033) Gap junction beta-2 protein (Connexin-26) (Cx26)| Length = 226 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 157 VVRPISSTLCFIRM*TTVNICFLLTMSKLCMCCYRVADGQICSP 26 V RP T+ + M IC LL +++LC R G+ P Sbjct: 182 VSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKKP 225
>CXB2_GORGO (Q8MHW5) Gap junction beta-2 protein (Connexin-26) (Cx26)| Length = 226 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 157 VVRPISSTLCFIRM*TTVNICFLLTMSKLCMCCYRVADGQICSP 26 V RP T+ + M IC LL +++LC R G+ P Sbjct: 182 VSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKKP 225 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,909,602 Number of Sequences: 219361 Number of extensions: 568438 Number of successful extensions: 1404 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1404 length of database: 80,573,946 effective HSP length: 54 effective length of database: 68,728,452 effective search space used: 1649482848 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
