ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast18c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.22
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.22
3emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.22
4gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 42 0.87
5emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on ... 42 0.87
6gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 0.87
7emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chr... 42 0.87
8dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 0.87
9gb|AC097507.2| Homo sapiens BAC clone RP11-371E22 from 4, comple... 42 0.87
10gb|U00039.1|ECOUW76 E. coli chromosomal region from 76.0 to 81.5... 42 0.87
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.87
12gb|AY910607.1| Crocodylus cataphractus isolate LD101488_8 c-mos ... 42 0.87
13gb|AY910606.1| Crocodylus cataphractus isolate LD31787_6 c-mos p... 42 0.87
14gb|AY910605.1| Crocodylus cataphractus isolate LD31787_2 c-mos p... 42 0.87
15gb|AY910604.1| Crocodylus cataphractus isolate LD63 c-mos protei... 42 0.87
16gb|AY910603.1| Crocodylus cataphractus isolate LD62 c-mos protei... 42 0.87
17gb|AY910602.1| Crocodylus cataphractus isolate LD50 c-mos protei... 42 0.87
18gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 42 0.87
19dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.87
20emb|V01503.1|ECMTLA E. coli gene mtlA encoding mannitol permease... 42 0.87
21emb|AJ323763.1|HSA323763 Homo sapiens genomic sequence surroundi... 42 0.87
22gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 0.87
23dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 0.87
24gb|CP000036.1| Shigella boydii Sb227, complete genome 42 0.87
25gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 0.87
26gb|BT017143.1| Zea mays clone EL01N0366F04.c mRNA sequence 40 3.5
27gb|AY447979.1| Alligator sinensis oocyte maturation factor Mos (... 40 3.5
28gb|AC161609.6| Mus musculus BAC clone RP23-139D15 from chromosom... 40 3.5
29gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 3.5
30gb|DQ465553.1| Epicrates striatus oocyte maturation factor (c-mo... 40 3.5
31gb|DQ461743.1| Lacerta danfordi clone FP9 c-mos (c-mos) gene, pa... 40 3.5
32gb|DQ461686.1| Lacerta laevis clone LV5/D c-mos pseudogene, part... 40 3.5
33gb|DQ461685.1| Lacerta laevis clone LV5/C c-mos pseudogene, part... 40 3.5
34gb|DQ097127.1| Lacerta schreiberi isolate BEJ3 oocyte maturation... 40 3.5
35gb|DQ097126.1| Lacerta schreiberi isolate EST1 oocyte maturation... 40 3.5
36gb|AC138400.12| Mus musculus chromosome 14, clone RP23-260C21, c... 40 3.5
37gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Canc... 40 3.5
38emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 40 3.5
39dbj|AB065371.1| Marsupenaeus japonicus mRNA for prophenoloxidase... 40 3.5
40gb|AC093839.3| Homo sapiens BAC clone RP11-433K16 from 4, comple... 40 3.5
41gb|AY058927.1| Demansia atra oocyte maturation factor Mos (c-mos... 40 3.5
42dbj|AK053019.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 3.5
43dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
44gb|AY099966.1| Epicrates striatus oocyte maturation factor (c-mo... 40 3.5
45gb|AY099964.1| Eunectes murinus oocyte maturation factor (c-mos)... 40 3.5
46gb|AY910586.1| Alligator sinensis isolate LD294 c-mos protein ge... 40 3.5
47dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
48dbj|AK108636.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1        aaacgaagggagtacataacaa 22
                ||||||||||||||||||||||
Sbjct: 10473003 aaacgaagggagtacataacaa 10473024
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1        aaacgaagggagtacataacaa 22
                ||||||||||||||||||||||
Sbjct: 10472885 aaacgaagggagtacataacaa 10472906
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>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 130454

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      aaacgaagggagtacataacaa 22
              ||||||||||||||||||||||
Sbjct: 125504 aaacgaagggagtacataacaa 125525
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 3738465 gaccagcttcgccagcgtctc 3738445
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>emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on chromosome 13 Contains the 3'
              end of the gene for androgen-induced prostate proliferative
              shutoff associated protein (AS3) (CG008, FLJ23236,
              KIAA0979), complete sequence
          Length = 137246

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 117    gagacatgaaaattccttgaa 137
              |||||||||||||||||||||
Sbjct: 135651 gagacatgaaaattccttgaa 135671
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 3770459 gaccagcttcgccagcgtctc 3770439
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>emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chromosome 13 Contains the 3'
              end of the KIAA0979 gene and part of a novel gene, complete
              sequence
          Length = 168487

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 117    gagacatgaaaattccttgaa 137
              |||||||||||||||||||||
Sbjct: 135142 gagacatgaaaattccttgaa 135162
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 3867979 gaccagcttcgccagcgtctc 3867999
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>gb|AC097507.2| Homo sapiens BAC clone RP11-371E22 from 4, complete sequence
          Length = 167032

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    acagatcactgacaaaactgt 84
             |||||||||||||||||||||
Sbjct: 57297 acagatcactgacaaaactgt 57277
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>gb|U00039.1|ECOUW76 E. coli chromosomal region from 76.0 to 81.5 minutes
          Length = 225419

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    gaccagcttcgccagcgtctc 237
              |||||||||||||||||||||
Sbjct: 186688 gaccagcttcgccagcgtctc 186668
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 206      ctcctgtatctgaccagcttcgcca 230
                |||||||||||||||||||| ||||
Sbjct: 24629695 ctcctgtatctgaccagctttgcca 24629671
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>gb|AY910607.1| Crocodylus cataphractus isolate LD101488_8 c-mos protein gene,
           partial cds
          Length = 302

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  ctggcatcacagcagagcttc 107
           |||||||||||||||||||||
Sbjct: 16  ctggcatcacagcagagcttc 36
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>gb|AY910606.1| Crocodylus cataphractus isolate LD31787_6 c-mos protein gene,
           partial cds
          Length = 287

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  ctggcatcacagcagagcttc 107
           |||||||||||||||||||||
Sbjct: 1   ctggcatcacagcagagcttc 21
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>gb|AY910605.1| Crocodylus cataphractus isolate LD31787_2 c-mos protein gene,
           partial cds
          Length = 302

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  ctggcatcacagcagagcttc 107
           |||||||||||||||||||||
Sbjct: 16  ctggcatcacagcagagcttc 36
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>gb|AY910604.1| Crocodylus cataphractus isolate LD63 c-mos protein gene, partial
           cds
          Length = 302

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  ctggcatcacagcagagcttc 107
           |||||||||||||||||||||
Sbjct: 16  ctggcatcacagcagagcttc 36
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>gb|AY910603.1| Crocodylus cataphractus isolate LD62 c-mos protein gene, partial
           cds
          Length = 302

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  ctggcatcacagcagagcttc 107
           |||||||||||||||||||||
Sbjct: 16  ctggcatcacagcagagcttc 36
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>gb|AY910602.1| Crocodylus cataphractus isolate LD50 c-mos protein gene, partial
           cds
          Length = 302

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  ctggcatcacagcagagcttc 107
           |||||||||||||||||||||
Sbjct: 16  ctggcatcacagcagagcttc 36
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 4036752 gaccagcttcgccagcgtctc 4036772
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1118_A06
          Length = 92836

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 206  ctcctgtatctgaccagcttcgcca 230
            |||||||||||||||||||| ||||
Sbjct: 1999 ctcctgtatctgaccagctttgcca 1975
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>emb|V01503.1|ECMTLA E. coli gene mtlA encoding mannitol permease. This is part of the
           phosphotransferase system. mannitol permease is Enzyme
           II of that system
          Length = 2162

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 217 gaccagcttcgccagcgtctc 237
           |||||||||||||||||||||
Sbjct: 293 gaccagcttcgccagcgtctc 273
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>emb|AJ323763.1|HSA323763 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ41-853S
          Length = 1003

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 217 gaccagcttcgccagcgtctc 237
           |||||||||||||||||||||
Sbjct: 290 gaccagcttcgccagcgtctc 270
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 4582365 gaccagcttcgccagcgtctc 4582345
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 4513383 gaccagcttcgccagcgtctc 4513363
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 3611585 gaccagcttcgccagcgtctc 3611565
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     gaccagcttcgccagcgtctc 237
               |||||||||||||||||||||
Sbjct: 3999135 gaccagcttcgccagcgtctc 3999155
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>gb|BT017143.1| Zea mays clone EL01N0366F04.c mRNA sequence
          Length = 1581

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 32 cacgtggcgtcatcacgaag 51
          ||||||||||||||||||||
Sbjct: 61 cacgtggcgtcatcacgaag 42
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>gb|AY447979.1| Alligator sinensis oocyte maturation factor Mos (c-mos) gene,
           partial cds
          Length = 558

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 92  tggcatcacagcagagcttc 111
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>gb|AC161609.6| Mus musculus BAC clone RP23-139D15 from chromosome 14, complete
             sequence
          Length = 219723

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tggctggcatcacagcagag 103
             ||||||||||||||||||||
Sbjct: 66962 tggctggcatcacagcagag 66943
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 217     gaccagcttcgccagcgtctcctg 240
               ||||||||||||||||| ||||||
Sbjct: 3007013 gaccagcttcgccagcgcctcctg 3006990
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>gb|DQ465553.1| Epicrates striatus oocyte maturation factor (c-mos) gene, partial
           cds
          Length = 486

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 38  tggcatcacagcagagcttc 57
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>gb|DQ461743.1| Lacerta danfordi clone FP9 c-mos (c-mos) gene, partial cds
          Length = 581

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 119 tggcatcacagcagagcttc 138
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>gb|DQ461686.1| Lacerta laevis clone LV5/D c-mos pseudogene, partial sequence
          Length = 580

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 118 tggcatcacagcagagcttc 137
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>gb|DQ461685.1| Lacerta laevis clone LV5/C c-mos pseudogene, partial sequence
          Length = 580

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 118 tggcatcacagcagagcttc 137
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>gb|DQ097127.1| Lacerta schreiberi isolate BEJ3 oocyte maturation factor Mos
           (c-mos) gene, partial cds
          Length = 522

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 59  tggcatcacagcagagcttc 78
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>gb|DQ097126.1| Lacerta schreiberi isolate EST1 oocyte maturation factor Mos
           (c-mos) gene, partial cds
          Length = 522

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 59  tggcatcacagcagagcttc 78
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>gb|AC138400.12| Mus musculus chromosome 14, clone RP23-260C21, complete sequence
          Length = 213423

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     tggctggcatcacagcagag 103
              ||||||||||||||||||||
Sbjct: 142249 tggctggcatcacagcagag 142268
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>gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 230983

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    gtcatcacgaagcttggcta 59
             ||||||||||||||||||||
Sbjct: 18283 gtcatcacgaagcttggcta 18302
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    gggcggccaccgtctgggcg 259
              ||||||||||||||||||||
Sbjct: 273349 gggcggccaccgtctgggcg 273330
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>dbj|AB065371.1| Marsupenaeus japonicus mRNA for prophenoloxidase, complete cds
          Length = 2046

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 cttcgccagcgtctcctggg 242
           ||||||||||||||||||||
Sbjct: 477 cttcgccagcgtctcctggg 458
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>gb|AC093839.3| Homo sapiens BAC clone RP11-433K16 from 4, complete sequence
          Length = 162522

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   gagacatgaaaattccttgaaaac 140
             |||||||||||| |||||||||||
Sbjct: 51937 gagacatgaaaaatccttgaaaac 51960
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>gb|AY058927.1| Demansia atra oocyte maturation factor Mos (c-mos) protooncogene,
           partial cds
          Length = 570

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 108 tggcatcacagcagagcttc 127
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>dbj|AK053019.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930017A14 product:unclassifiable, full
           insert sequence
          Length = 2673

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  tggctggcatcacagcagag 103
           ||||||||||||||||||||
Sbjct: 447 tggctggcatcacagcagag 466
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 206      ctcctgtatctgaccagcttcgccagcgtctcctgggcggccaccgtctggg 257
                ||||||||||| |||||||| ||||  |||||||| || ||||  |||||||
Sbjct: 18440052 ctcctgtatctaaccagctttgccaatgtctcctgagcagccagtgtctggg 18440001
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>gb|AY099966.1| Epicrates striatus oocyte maturation factor (c-mos) gene, partial
           cds
          Length = 570

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 108 tggcatcacagcagagcttc 127
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>gb|AY099964.1| Eunectes murinus oocyte maturation factor (c-mos) gene, partial cds
          Length = 570

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 108 tggcatcacagcagagcttc 127
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>gb|AY910586.1| Alligator sinensis isolate LD294 c-mos protein gene, partial cds
          Length = 302

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tggcatcacagcagagcttc 107
           ||||||||||||||||||||
Sbjct: 17  tggcatcacagcagagcttc 36
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463D04
          Length = 145828

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                  
Query: 206    ctcctgtatctgaccagcttcgccagcgtctcctgggcggccaccgtctggg 257
              ||||||||||| |||||||| ||||  |||||||| || ||||  |||||||
Sbjct: 101926 ctcctgtatctaaccagctttgccaatgtctcctgagcagccagtgtctggg 101875
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>dbj|AK108636.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-G06, full
            insert sequence
          Length = 1848

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 206  ctcctgtatctgaccagcttcgccagcgtctcctgggcggccaccgtctggg 257
            ||||||||||| |||||||| ||||  |||||||| || ||||  |||||||
Sbjct: 1672 ctcctgtatctaaccagctttgccaatgtctcctgagcagccagtgtctggg 1621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,821,839
Number of Sequences: 3902068
Number of extensions: 1821839
Number of successful extensions: 34572
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34293
Number of HSP's gapped (non-prelim): 279
length of query: 266
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 244
effective length of database: 17,147,199,772
effective search space: 4183916744368
effective search space used: 4183916744368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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