>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1|
          Length = 950

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = +1

Query: 40  PSRRSTSIEKKHFRCNTRKAENSLPCLCSQYYRISKPA*AAADVSTHTQHNISFFRKVET 219
           P+ RS     +H R  +    +SLP +  +  R S P+  AAD +  + HN S    V  
Sbjct: 50  PADRSPERVSQHSRGASVHDADSLPPIRPRGSRPSSPSGHAADRAPSSHHNASSTATVPA 109

Query: 220 TPTSHNLLLEGR 255
             T+ +L  + R
Sbjct: 110 RSTARSLFRDPR 121

>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog|
          Length = 1849

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 74  ISAATPEKQKTACLACVHSITG*ANQLELLLM-FRHTHNTTFPF 202
           + A TPEK KTA   CV   T   N  EL+   F+ T N T  F
Sbjct: 778 LEAKTPEKAKTAPNPCVSLCTATKNLKELIHRDFKDTKNNTEGF 821

>RIP3_MOMCH (P24817) Ribosome-inactivating protein beta-momorcharin precursor|
           (EC 3.2.2.22) (rRNA N-glycosidase) (MAP 30) (B-MMC)
          Length = 286

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 169 VSTHTQHNISFFRKVETTPTSHNLLLEGRGKIIFPY 276
           V  +   ++S+F K E+ P ++N+L +G  KI  PY
Sbjct: 94  VVAYRTRDVSYFFK-ESPPEAYNILFKGTRKITLPY 128

>RIP2_MOMBA (P29339) Ribosome-inactivating protein momordin II precursor (EC|
           3.2.2.22) (rRNA N-glycosidase)
          Length = 286

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 169 VSTHTQHNISFFRKVETTPTSHNLLLEGRGKIIFPY 276
           V  +   ++S+F K E+ P ++N+L +G  KI  PY
Sbjct: 94  VVAYRTRDVSYFFK-ESPPEAYNILFKGTRKITLPY 128

>DDL_STRMU (P95803) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 349

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 225 RCSFNLTEKGNVVLCVCRNISSSSSWFAYPVI 130
           RC F LTE G V L     +   + W  YP++
Sbjct: 287 RCDFFLTEDGKVYLNELNTMPGFTQWSMYPLL 318

>DDL_LACLA (Q9CIL5) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 349

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 225 RCSFNLTEKGNVVLCVCRNISSSSSWFAYPVI 130
           RC F +T+ GNV L     I   + W  YP++
Sbjct: 287 RCDFFVTKDGNVYLNEINAIPGFTQWSMYPLL 318

>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing|
           protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD
           and RING finger domains protein 2) (Np95/ICBP90-like
           RING finger protein) (Np95-like RING finger protein)
           (Nuclear zinc finger
          Length = 802

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = -2

Query: 202 KRKC----CVVCVSKHQQQLKLVCLSCN 131
           ++KC    C VC  KH+  ++L+C  CN
Sbjct: 339 EKKCHSCSCRVCGGKHEPNMQLLCDECN 366

>STE16_SCHPO (Q09743) Protein ste16|
          Length = 1309

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 160 AADVSTHTQHNISFFRKVETTPTSHNLLLEG-RGKI 264
           A D+S+H + N  F +K+ TT +    LLE  +GK+
Sbjct: 12  ALDISSHAKTNGDFIKKMNTTDSKRLKLLEDLKGKL 47

>VU54_HHV6U (P24434) Protein U54|
          Length = 458

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 225 RCSFNLTEKGNVVLCVCRNISS-SSSWFAY 139
           +C   +T   + V+C+CR+ SS +SS F Y
Sbjct: 32  KCGLGITPPSSAVVCICRDESSFTSSPFTY 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,099,540
Number of Sequences: 219361
Number of extensions: 784622
Number of successful extensions: 1748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)