ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast17h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC154479.2| Mus musculus BAC clone RP24-135I6 from chromosome... 48 0.016
2gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complet... 44 0.25
3gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, comple... 44 0.25
4emb|AL671532.13| Human DNA sequence from clone RP11-512A4 on chr... 44 0.25
5gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, comple... 44 0.25
6emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4,... 42 0.97
7gb|AC093430.3| Homo sapiens chromosome 1 clone RP11-171B15, comp... 42 0.97
8gb|AC098651.3| Homo sapiens chromosome 1 clone RP11-548C21, comp... 42 0.97
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
11dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
12gb|AC147240.3| Mus musculus BAC clone RP23-398F20 from 10, compl... 42 0.97
13gb|AC113991.4| Mus musculus chromosome 3, clone RP24-138E17, com... 40 3.8
14gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, com... 40 3.8
15gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 40 3.8
16gb|AC115049.6| Mus musculus chromosome 3, clone RP24-332L11, com... 40 3.8
17gb|DQ125486.1| Toxoplasma gondii structural maintenance of chrom... 40 3.8
18ref|XM_713538.1| Candida albicans SC5314 hypothetical protein (C... 40 3.8
19gb|AC091637.1| Pan troglodytes clone RP43-176G10, complete sequence 40 3.8
20gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosom... 40 3.8
21gb|AC002465.1| Homo sapiens BAC clone CTA-343P13 from 7, complet... 40 3.8
22emb|CR788304.8| Zebrafish DNA sequence from clone DKEY-56J15 in ... 40 3.8
23gb|AC139757.4| Mus musculus BAC clone RP23-440H11 from chromosom... 40 3.8
24emb|Z81482.1|CEC40H5 Caenorhabditis elegans Cosmid C40H5, comple... 40 3.8
25gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, comple... 40 3.8
26gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome... 40 3.8
27gb|AC108781.9| Mus musculus, clone RP23-304K14, complete sequence 40 3.8
28emb|AL161420.10| Human DNA sequence from clone RP11-155N3 on chr... 40 3.8
29emb|AL137125.7| Human DNA sequence from clone RP11-175E13 on chr... 40 3.8
30emb|AL138731.10| Human DNA sequence from clone RP1-23E21 on chro... 40 3.8
31emb|AL772234.5| Mouse DNA sequence from clone RP23-413M22 on chr... 40 3.8
32emb|AL929014.28| Zebrafish DNA sequence from clone CH211-198B3 i... 40 3.8
33emb|BX321910.6| Zebrafish DNA sequence from clone DKEYP-25B4 in ... 40 3.8
34gb|AC015563.11| Homo sapiens chromosome 18, clone RP11-344B2, co... 40 3.8
35gb|AC011825.13| Homo sapiens chromosome 18, clone RP11-53I6, com... 40 3.8
36gb|AC153370.13| Mus musculus 10 BAC RP23-281M13 (Roswell Park Ca... 40 3.8
37gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9... 40 3.8
38gb|AC156501.3| Mus musculus BAC clone RP23-358M3 from chromosome... 40 3.8
39gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chrom... 40 3.8
40gb|AC158599.7| Mus musculus 10 BAC RP23-122O12 (Roswell Park Can... 40 3.8
41gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 3.8
42gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold 40 3.8
43gb|AC154322.1| Mus musculus BAC clone RP23-299P17 from chromosom... 40 3.8
44dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene clu... 40 3.8
45gb|AC055863.16| Homo sapiens chromosome 17, clone RP11-478P5, co... 40 3.8
46gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis thaliana... 40 3.8
47dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
48dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
49emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ... 40 3.8
50emb|Z98200.9|HS111B22 Human DNA sequence from clone RP1-111B22 o... 40 3.8
51gb|AC154388.4| Mus musculus BAC clone RP23-14P7 from chromosome ... 40 3.8
52emb|AL732617.24| Mouse DNA sequence from clone RP23-196C23 on ch... 40 3.8
53emb|CT010520.15| Mouse DNA sequence from clone RP23-349A19 on ch... 40 3.8
54emb|BX000438.7| Zebrafish DNA sequence from clone CH211-209M20 i... 40 3.8
55emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chr... 40 3.8
56emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on ch... 40 3.8 
>gb|AC154479.2| Mus musculus BAC clone RP24-135I6 from chromosome 9, complete sequence
          Length = 153964

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 236   ttcttcgtctctcttctcttctct 259
             ||||||||||||||||||||||||
Sbjct: 73555 ttcttcgtctctcttctcttctct 73578
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>gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complete sequence
          Length = 155813

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 159   acaatcataaatcataattattaaag 184
             |||||||||||||| |||||||||||
Sbjct: 19350 acaatcataaatcagaattattaaag 19325
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>gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, complete sequence
          Length = 152654

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 159    acaatcataaatcataattattaaag 184
              |||||||||||||| |||||||||||
Sbjct: 138756 acaatcataaatcagaattattaaag 138731
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>emb|AL671532.13| Human DNA sequence from clone RP11-512A4 on chromosome 22, complete
              sequence
          Length = 211173

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 159    acaatcataaatcataattattaaag 184
              |||||||||||||| |||||||||||
Sbjct: 202080 acaatcataaatcagaattattaaag 202055
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>gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, complete sequence
          Length = 191211

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 150   ataactaaaacaatcataaatc 171
             ||||||||||||||||||||||
Sbjct: 66284 ataactaaaacaatcataaatc 66305
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>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01,
             complete sequence
          Length = 148353

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 243   tctctcttctcttctctacttggag 267
             ||||||||||||||||||| |||||
Sbjct: 44129 tctctcttctcttctctacgtggag 44153
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>gb|AC093430.3| Homo sapiens chromosome 1 clone RP11-171B15, complete sequence
          Length = 153414

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    gtttattttgaatcaaagaaa 48
             |||||||||||||||||||||
Sbjct: 47609 gtttattttgaatcaaagaaa 47629
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>gb|AC098651.3| Homo sapiens chromosome 1 clone RP11-548C21, complete sequence
          Length = 78483

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    gtttattttgaatcaaagaaa 48
             |||||||||||||||||||||
Sbjct: 54985 gtttattttgaatcaaagaaa 55005
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 243      tctctcttctcttctctacttggag 267
                ||||||||||||||||||| |||||
Sbjct: 18462774 tctctcttctcttctctacgtggag 18462798
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 243     tctctcttctcttctctactt 263
               |||||||||||||||||||||
Sbjct: 7088983 tctctcttctcttctctactt 7089003



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 243      tctctcttctcttctctact 262
                ||||||||||||||||||||
Sbjct: 19662657 tctctcttctcttctctact 19662638
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>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0495C02
          Length = 151467

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 243   tctctcttctcttctctactt 263
             |||||||||||||||||||||
Sbjct: 92402 tctctcttctcttctctactt 92422
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>gb|AC147240.3| Mus musculus BAC clone RP23-398F20 from 10, complete sequence
          Length = 195921

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   aaaacaatcataaatcataat 176
             |||||||||||||||||||||
Sbjct: 83818 aaaacaatcataaatcataat 83838
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>gb|AC113991.4| Mus musculus chromosome 3, clone RP24-138E17, complete sequence
          Length = 138057

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tggacaacatacatctttat 102
             ||||||||||||||||||||
Sbjct: 29313 tggacaacatacatctttat 29294
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>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence
          Length = 245125

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 247  tcttctcttctctacttggagttg 270
            |||||||||||||| |||||||||
Sbjct: 9753 tcttctcttctctagttggagttg 9730
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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     tcgtctctcttctcttctct 259
               ||||||||||||||||||||
Sbjct: 1156231 tcgtctctcttctcttctct 1156212
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>gb|AC115049.6| Mus musculus chromosome 3, clone RP24-332L11, complete sequence
          Length = 165247

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   tggacaacatacatctttat 102
            ||||||||||||||||||||
Sbjct: 3647 tggacaacatacatctttat 3666
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>gb|DQ125486.1| Toxoplasma gondii structural maintenance of chromosome 2 (SMC2) gene,
            complete cds
          Length = 18600

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  cttcttcgtctctcttctct 254
            ||||||||||||||||||||
Sbjct: 4108 cttcttcgtctctcttctct 4127
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>ref|XM_713538.1| Candida albicans SC5314 hypothetical protein (CaO19_7473), mRNA
          Length = 2274

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 taaatcataattattaaagt 185
           ||||||||||||||||||||
Sbjct: 939 taaatcataattattaaagt 920
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>gb|AC091637.1| Pan troglodytes clone RP43-176G10, complete sequence
          Length = 51190

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   tcgtctctcttctcttctct 259
             ||||||||||||||||||||
Sbjct: 18933 tcgtctctcttctcttctct 18914
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>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete sequence
          Length = 184690

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 235    cttcttcgtctctcttctcttctctact 262
              |||||| ||||| |||||||||||||||
Sbjct: 123572 cttcttggtctcacttctcttctctact 123599
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>gb|AC002465.1| Homo sapiens BAC clone CTA-343P13 from 7, complete sequence
          Length = 155881

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   tcgtctctcttctcttctct 259
             ||||||||||||||||||||
Sbjct: 15403 tcgtctctcttctcttctct 15384
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>emb|CR788304.8| Zebrafish DNA sequence from clone DKEY-56J15 in linkage group 2,
            complete sequence
          Length = 20264

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  taaaacaatcataaatcata 174
            ||||||||||||||||||||
Sbjct: 3279 taaaacaatcataaatcata 3260
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>gb|AC139757.4| Mus musculus BAC clone RP23-440H11 from chromosome 18, complete sequence
          Length = 193847

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    tcttctcttctctacttggagttg 270
              |||||||||||||| |||||||||
Sbjct: 149059 tcttctcttctctagttggagttg 149036
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>emb|Z81482.1|CEC40H5 Caenorhabditis elegans Cosmid C40H5, complete sequence
          Length = 43554

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tttattttgaatcaaagaaa 48
             ||||||||||||||||||||
Sbjct: 13194 tttattttgaatcaaagaaa 13213
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>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    tcgtctctcttctcttctct 259
              ||||||||||||||||||||
Sbjct: 160377 tcgtctctcttctcttctct 160358
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>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence
          Length = 231668

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 29    tttattttgaatca-aagaaagtacaag 55
             |||||||||||||| |||||||||||||
Sbjct: 85969 tttattttgaatcagaagaaagtacaag 85942
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>gb|AC108781.9| Mus musculus, clone RP23-304K14, complete sequence
          Length = 183718

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 152    aactaaaacaatcataaatcataa 175
              |||||||| |||||||||||||||
Sbjct: 135487 aactaaaataatcataaatcataa 135510
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>emb|AL161420.10| Human DNA sequence from clone RP11-155N3 on chromosome 13 Contains the
             3' end of the gene for zizimin1 (KIAA1058) and a novel
             gene, complete sequence
          Length = 163316

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ggagttgaggttggtttggc 283
             ||||||||||||||||||||
Sbjct: 94703 ggagttgaggttggtttggc 94684
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>emb|AL137125.7| Human DNA sequence from clone RP11-175E13 on chromosome 9p23-24.3
             Contains part of the PTPRD gene for protein tyrosine
             phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
             complete sequence
          Length = 92384

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   ttcttcgtctctcttctcttctct 259
             |||||| |||||||||||||||||
Sbjct: 12746 ttcttcttctctcttctcttctct 12769
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>emb|AL138731.10| Human DNA sequence from clone RP1-23E21 on chromosome 6 Contains a
             novel gene and a 26S proteasome-associated PAD1 homolog
             POH1 pseudogene, complete sequence
          Length = 72312

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    tttattttgaatcaaagaaa 48
             ||||||||||||||||||||
Sbjct: 20037 tttattttgaatcaaagaaa 20018
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>emb|AL772234.5| Mouse DNA sequence from clone RP23-413M22 on chromosome 11, complete
              sequence
          Length = 193528

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 236    ttcttcgtctctcttctcttctct 259
              |||||| |||||||||||||||||
Sbjct: 111070 ttcttcttctctcttctcttctct 111047
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>emb|AL929014.28| Zebrafish DNA sequence from clone CH211-198B3 in linkage group 20
             Contains the gene for a novel protein similar to
             vertebrate fibronectin type III domain containing 1
             (FNDC1), the 5' end of the gene for a novel protein
             similar to vertebrate otoferlin (OTOF), a novel gene and
             two CpG islands, complete sequence
          Length = 163523

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   tcgtctctcttctcttctct 259
             ||||||||||||||||||||
Sbjct: 58942 tcgtctctcttctcttctct 58961
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>emb|BX321910.6| Zebrafish DNA sequence from clone DKEYP-25B4 in linkage group 7, complete
              sequence
          Length = 167869

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    aatcataaatcataattatt 180
              ||||||||||||||||||||
Sbjct: 124459 aatcataaatcataattatt 124478
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>gb|AC015563.11| Homo sapiens chromosome 18, clone RP11-344B2, complete sequence
          Length = 214984

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   tctctcttctcttctctacttgga 266
             ||||| ||||||||||||||||||
Sbjct: 44813 tctctgttctcttctctacttgga 44836
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>gb|AC011825.13| Homo sapiens chromosome 18, clone RP11-53I6, complete sequence
          Length = 176222

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 243    tctctcttctcttctctacttgga 266
              ||||| ||||||||||||||||||
Sbjct: 136657 tctctgttctcttctctacttgga 136680
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>gb|AC153370.13| Mus musculus 10 BAC RP23-281M13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 213550

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   ctctcttctcttctctactt 263
             ||||||||||||||||||||
Sbjct: 71523 ctctcttctcttctctactt 71542
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>gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9f22, complete sequence
          Length = 120423

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   ttcttcgtctctcttctcttctct 259
             |||||| |||||||||||||||||
Sbjct: 13700 ttcttcttctctcttctcttctct 13723
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>gb|AC156501.3| Mus musculus BAC clone RP23-358M3 from chromosome 14, complete sequence
          Length = 195115

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   aactaaaacaatcataaatcataa 175
             |||||||| |||||||||||||||
Sbjct: 92475 aactaaaataatcataaatcataa 92452
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>gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chromosome unknown, complete
              sequence
          Length = 196429

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     caagtggacaacatacatctttat 102
              ||||| ||||||||||||||||||
Sbjct: 104225 caagttgacaacatacatctttat 104202
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>gb|AC158599.7| Mus musculus 10 BAC RP23-122O12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 191825

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   ctctcttctcttctctactt 263
             ||||||||||||||||||||
Sbjct: 32265 ctctcttctcttctctactt 32246
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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     tcgtctctcttctcttctct 259
               ||||||||||||||||||||
Sbjct: 1069048 tcgtctctcttctcttctct 1069029
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>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     tcgtctctcttctcttctct 259
               ||||||||||||||||||||
Sbjct: 1045310 tcgtctctcttctcttctct 1045291
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>gb|AC154322.1| Mus musculus BAC clone RP23-299P17 from chromosome 14, complete sequence
          Length = 182146

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    tctcttctcttctctacttg 264
              ||||||||||||||||||||
Sbjct: 122252 tctcttctcttctctacttg 122233
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>dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene cluster (Padi2, Padi1,
             Padi23, Padi4, Padi6), complete cds
          Length = 240498

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   tcgtctctcttctcttctct 259
             ||||||||||||||||||||
Sbjct: 37966 tcgtctctcttctcttctct 37985
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>gb|AC055863.16| Homo sapiens chromosome 17, clone RP11-478P5, complete sequence
          Length = 152348

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    cttcgtctctcttctcttct 257
              ||||||||||||||||||||
Sbjct: 118860 cttcgtctctcttctcttct 118879
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>gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis thaliana BAC F1N21 from chromosome I,
              complete sequence
          Length = 114738

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tcttcgtctctcttctcttc 256
              ||||||||||||||||||||
Sbjct: 107501 tcttcgtctctcttctcttc 107520
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>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1136H02
          Length = 145086

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   tctctcttctcttctctact 262
             ||||||||||||||||||||
Sbjct: 19415 tctctcttctcttctctact 19396
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>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0605D08
          Length = 144340

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    tctctcttctcttctctact 262
              ||||||||||||||||||||
Sbjct: 128943 tctctcttctcttctctact 128924
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>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
              complete sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    aaaacaatcataaatcataa 175
              ||||||||||||||||||||
Sbjct: 226201 aaaacaatcataaatcataa 226220
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>emb|Z98200.9|HS111B22 Human DNA sequence from clone RP1-111B22 on chromosome 6q16-21 Contains a
              ribosomal protein L3 (RPL3) pseudogenee, the OSTM1 gene for
              osteopetrosis associated transmembrane, the 5' end of a
              novel gene and three CpG islands, complete sequence
          Length = 153382

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     caagtggacaacatacatctttat 102
              ||||| ||||||||||||||||||
Sbjct: 133939 caagttgacaacatacatctttat 133916
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>gb|AC154388.4| Mus musculus BAC clone RP23-14P7 from chromosome 14, complete sequence
          Length = 246800

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 236   ttcttcgtctctcttctcttctct 259
             |||||| |||||||||||||||||
Sbjct: 15949 ttcttcctctctcttctcttctct 15926
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>emb|AL732617.24| Mouse DNA sequence from clone RP23-196C23 on chromosome 4, complete
              sequence
          Length = 226501

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    cttcttcgtctctcttctct 254
              ||||||||||||||||||||
Sbjct: 196434 cttcttcgtctctcttctct 196415
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>emb|CT010520.15| Mouse DNA sequence from clone RP23-349A19 on chromosome 14, complete
             sequence
          Length = 175582

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   ttcttcgtctctcttctcttctct 259
             |||||| |||||||||||||||||
Sbjct: 37063 ttcttcctctctcttctcttctct 37086
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>emb|BX000438.7| Zebrafish DNA sequence from clone CH211-209M20 in linkage group 20,
             complete sequence
          Length = 195087

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aaaacaatcataaatcataa 175
             ||||||||||||||||||||
Sbjct: 14808 aaaacaatcataaatcataa 14827
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>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete
            sequence
          Length = 226754

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  tcgtctctcttctcttctct 259
            ||||||||||||||||||||
Sbjct: 6275 tcgtctctcttctcttctct 6256
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>emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on chromosome 15, complete
             sequence
          Length = 202342

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   tctctcttctcttctctact 262
             ||||||||||||||||||||
Sbjct: 34878 tctctcttctcttctctact 34897


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,327,152
Number of Sequences: 3902068
Number of extensions: 3327152
Number of successful extensions: 165251
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 164744
Number of HSP's gapped (non-prelim): 510
length of query: 293
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 271
effective length of database: 17,147,199,772
effective search space: 4646891138212
effective search space used: 4646891138212
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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