ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast17e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC116699.9| Mus musculus chromosome 9, clone RP23-5H10, compl... 44 0.16
2emb|CT025567.10| Mouse DNA sequence from clone RP23-302A9 on chr... 44 0.16
3gb|AC120000.17| Mus musculus chromosome 3, clone RP24-133F9, com... 42 0.63
4gb|AC159259.2| Mus musculus BAC clone RP24-83G17 from chromosome... 42 0.63
5gb|AC162523.9| Mus musculus chromosome 8, clone RP23-370L21, com... 40 2.5
6gb|AC125042.4| Mus musculus BAC clone RP23-339G10 from chromosom... 40 2.5
7gb|AC110524.11| Mus musculus chromosome 9, clone RP23-403L22, co... 40 2.5
8gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosom... 40 2.5
9emb|BX322635.6| Human DNA sequence from clone RP1-290F12 on chro... 40 2.5
10gb|AC099565.2| Homo sapiens chromosome 1 clone RP4-651I17, compl... 40 2.5
11gb|AC135316.15| Medicago truncatula clone mth2-20l8, complete se... 40 2.5
12gb|AF510423.1|AF510423S1 Homo sapiens chromosome 5 BAC clone TAR... 40 2.5
13gb|AC157513.2| Mus musculus BAC clone RP24-280G4 from chromosome... 40 2.5
14gb|AC158329.1| Homo sapiens chromosome 1 clone WI2-3059K10, comp... 40 2.5
15gb|AC091825.4| Homo sapiens chromosome 5 clone CTC-463A16, compl... 40 2.5
16gb|AC006958.1|AC006958 Homo sapiens chromosome 5q, Bac clone 32d... 40 2.5
17gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosom... 40 2.5
18dbj|AP006119.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 2.5
19gb|AC168310.6| Mus musculus chromosome 8, clone RP24-345M22, com... 40 2.5
20gb|AC122888.5| Mus musculus BAC clone RP23-93F11 from chromosome... 38 9.9
21gb|AY980606.1| Uncultured bacterium clone LK34 16S ribosomal RNA... 38 9.9
22gb|AY976359.1| Uncultured bacterium clone LY38 16S ribosomal RNA... 38 9.9
23ref|XM_370518.1| Magnaporthe grisea 70-15 chromosome II hypothet... 38 9.9
24ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfami... 38 9.9
25gb|AC146138.2| Pan troglodytes BAC clone RP43-3D14 from 7, compl... 38 9.9
26gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, comp... 38 9.9
27gb|AC144621.3| Mus musculus BAC clone RP24-335I14 from chromosom... 38 9.9
28gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosom... 38 9.9
29gb|AC011904.3| Homo sapiens BAC clone CTD-3244O18 from 7, comple... 38 9.9
30gb|AC130838.3| Mus musculus BAC clone RP24-369B4 from chromosome... 38 9.9
31emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on ch... 38 9.9
32gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, co... 38 9.9
33emb|AL357293.16| Human DNA sequence from clone RP11-418K10 on ch... 38 9.9
34emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chr... 38 9.9
35emb|AL109841.16|HSJ826I18 Human DNA sequence from clone RP5-826I... 38 9.9
36gb|AC157904.3| Mus musculus chromosome 18, clone RP23-379G12, co... 38 9.9
37emb|Z92546.2|HS65A6 Human DNA sequence from clone CTA-65A6 on ch... 38 9.9
38gb|AC158238.2| Mus musculus BAC clone RP23-106F10 from chromosom... 38 9.9
39emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BA... 38 9.9
40emb|CR931732.2| Medicago truncatula chromosome 5 clone mth2-117e... 38 9.9
41emb|BX323809.14| Zebrafish DNA sequence from clone DKEY-42J10 in... 38 9.9
42gb|AC159903.3| Pan troglodytes BAC clone CH251-459A3 from chromo... 38 9.9
43gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence 38 9.9
44gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, comp... 38 9.9
45dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 38 9.9
46gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Can... 38 9.9
47gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence 38 9.9
48gb|AC040161.5| Homo sapiens chromosome 16 clone CTC-420A11, comp... 38 9.9
49gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosom... 38 9.9
50gb|AC161370.3| Mus musculus BAC clone RP23-437J23 from chromosom... 38 9.9
51dbj|AK035720.1| Mus musculus adult male urinary bladder cDNA, RI... 38 9.9
52gb|AC160649.2| Pan troglodytes BAC clone CH251-568N12 from chrom... 38 9.9
53gb|AC004977.2|AC004977 Homo sapiens PAC clone RP5-1152C17 from 7... 38 9.9
54dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.9
55gb|AC138472.3| Homo sapiens chromosome 19 clone CTC-419E6, compl... 38 9.9
56dbj|AB099782.1| Uncultured bacterium gene for 16S rRNA, partial ... 38 9.9
57gb|AC080091.5| Homo sapiens BAC clone RP11-802G5 from 2, complet... 38 9.9
58gb|AC116982.2| Dictyostelium discoideum chromosome 2 map 3622643... 38 9.9
59gb|AC161282.5| Pan troglodytes BAC clone CH251-381O9 from chromo... 38 9.9
60gb|AC073898.1|AC073898 Homo sapiens chromosome 19 BAC BC311202 (... 38 9.9
61dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.9
62emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f1... 38 9.9
63gb|AF001415.1|AF001415 Arabidopsis thaliana 14-3-3-like protein ... 38 9.9
64emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-7... 38 9.9
65gb|AC102173.15| Mus musculus chromosome 18, clone RP23-472D7, co... 38 9.9
66gb|DQ326649.1| Uncultured bacterium clone E088 16S ribosomal RNA... 38 9.9
67gb|AC004804.1|AC004804 Homo sapiens 12p13.3 PAC RPCI5-927J10 (Ro... 38 9.9
68gb|AC139330.4| Mus musculus BAC clone RP24-206O6 from 12, comple... 38 9.9
69gb|AC151413.2| Mus musculus BAC clone RP23-103N6 from 19, comple... 38 9.9
70gb|L47334.1|HUM19ANON1 Human DNA from cosmid f23280 from chromos... 38 9.9
71emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chr... 38 9.9
72dbj|AP000353.2| Homo sapiens genomic DNA, chromosome 22q11.2, IG... 38 9.9
73dbj|AP005272.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 38 9.9 
>gb|AC116699.9| Mus musculus chromosome 9, clone RP23-5H10, complete sequence
          Length = 197781

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 6      ccacaggcaggcattccagcag 27
              ||||||||||||||||||||||
Sbjct: 173598 ccacaggcaggcattccagcag 173619
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>emb|CT025567.10| Mouse DNA sequence from clone RP23-302A9 on chromosome 9, complete
             sequence
          Length = 238033

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 6     ccacaggcaggcattccagcag 27
             ||||||||||||||||||||||
Sbjct: 29528 ccacaggcaggcattccagcag 29549
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>gb|AC120000.17| Mus musculus chromosome 3, clone RP24-133F9, complete sequence
          Length = 149389

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 43     accctttactcttttcccattttcc 67
              |||||||||||||||||| ||||||
Sbjct: 142665 accctttactcttttccccttttcc 142689
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>gb|AC159259.2| Mus musculus BAC clone RP24-83G17 from chromosome 3, complete sequence
          Length = 191517

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 43     accctttactcttttcccattttcc 67
              |||||||||||||||||| ||||||
Sbjct: 161726 accctttactcttttccccttttcc 161702
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>gb|AC162523.9| Mus musculus chromosome 8, clone RP23-370L21, complete sequence
          Length = 193777

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   aaccaaaaagaaaaagcaaa 88
            ||||||||||||||||||||
Sbjct: 3662 aaccaaaaagaaaaagcaaa 3681
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>gb|AC125042.4| Mus musculus BAC clone RP23-339G10 from chromosome 9, complete sequence
          Length = 219183

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     aaccaaaaagaaaaagcaaa 88
              ||||||||||||||||||||
Sbjct: 197331 aaccaaaaagaaaaagcaaa 197350
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>gb|AC110524.11| Mus musculus chromosome 9, clone RP23-403L22, complete sequence
          Length = 225122

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     aaccaaaaagaaaaagcaaa 88
              ||||||||||||||||||||
Sbjct: 202146 aaccaaaaagaaaaagcaaa 202127
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>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence
          Length = 224179

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 89     gtgtaggagctggtggtaggagca 112
              |||||||||||||| |||||||||
Sbjct: 102262 gtgtaggagctggttgtaggagca 102285
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>emb|BX322635.6| Human DNA sequence from clone RP1-290F12 on chromosome X Contains the
             gene for super conserved receptor expressed in brain 3
             (SREB3), the gene for cutaneous T-cell lymphoma-associated
             tumor antigen se20-4 (SE20-4) and two CpG islands,
             complete sequence
          Length = 66325

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aaaagaaaaagcaaagtgta 93
             ||||||||||||||||||||
Sbjct: 11218 aaaagaaaaagcaaagtgta 11237
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>gb|AC099565.2| Homo sapiens chromosome 1 clone RP4-651I17, complete sequence
          Length = 108078

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    accaaaaagaaaaagcaaag 89
             ||||||||||||||||||||
Sbjct: 75639 accaaaaagaaaaagcaaag 75658
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>gb|AC135316.15| Medicago truncatula clone mth2-20l8, complete sequence
          Length = 127653

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 61    attttccgaaccaaaaagaaaaagcaaa 88
             ||||| || |||||||||||||||||||
Sbjct: 58045 atttttcgtaccaaaaagaaaaagcaaa 58018
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>gb|AF510423.1|AF510423S1 Homo sapiens chromosome 5 BAC clone TAR28, 5' sequence
          Length = 67197

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aaccaaaaagaaaaagcaaa 88
             ||||||||||||||||||||
Sbjct: 29885 aaccaaaaagaaaaagcaaa 29866
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>gb|AC157513.2| Mus musculus BAC clone RP24-280G4 from chromosome 9, complete sequence
          Length = 177728

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aaccaaaaagaaaaagcaaa 88
             ||||||||||||||||||||
Sbjct: 79218 aaccaaaaagaaaaagcaaa 79237
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>gb|AC158329.1| Homo sapiens chromosome 1 clone WI2-3059K10, complete sequence
          Length = 38130

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    accaaaaagaaaaagcaaag 89
             ||||||||||||||||||||
Sbjct: 15803 accaaaaagaaaaagcaaag 15784
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>gb|AC091825.4| Homo sapiens chromosome 5 clone CTC-463A16, complete sequence
          Length = 200655

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     aaccaaaaagaaaaagcaaa 88
              ||||||||||||||||||||
Sbjct: 121214 aaccaaaaagaaaaagcaaa 121233
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>gb|AC006958.1|AC006958 Homo sapiens chromosome 5q, Bac clone 32d16 (LBNL h177), complete
             sequence
          Length = 77902

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aaccaaaaagaaaaagcaaa 88
             ||||||||||||||||||||
Sbjct: 63979 aaccaaaaagaaaaagcaaa 63998
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>gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosome 9, complete sequence
          Length = 195116

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aaccaaaaagaaaaagcaaa 88
             ||||||||||||||||||||
Sbjct: 69778 aaccaaaaagaaaaagcaaa 69759
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>dbj|AP006119.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT45C16, TM0203,
            complete sequence
          Length = 110764

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   aaccaaaaagaaaaagcaaa 88
            ||||||||||||||||||||
Sbjct: 3951 aaccaaaaagaaaaagcaaa 3970
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>gb|AC168310.6| Mus musculus chromosome 8, clone RP24-345M22, complete sequence
          Length = 178580

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     aaccaaaaagaaaaagcaaa 88
              ||||||||||||||||||||
Sbjct: 153329 aaccaaaaagaaaaagcaaa 153310
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>gb|AC122888.5| Mus musculus BAC clone RP23-93F11 from chromosome 3, complete sequence
          Length = 206760

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    aaaaagaaaaagcaaagtg 91
             |||||||||||||||||||
Sbjct: 54742 aaaaagaaaaagcaaagtg 54760
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>gb|AY980606.1| Uncultured bacterium clone LK34 16S ribosomal RNA gene, partial
           sequence
          Length = 1371

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 48  ttactcttttcccattttc 66
           |||||||||||||||||||
Sbjct: 221 ttactcttttcccattttc 203
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>gb|AY976359.1| Uncultured bacterium clone LY38 16S ribosomal RNA gene, partial
           sequence
          Length = 1371

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 48  ttactcttttcccattttc 66
           |||||||||||||||||||
Sbjct: 221 ttactcttttcccattttc 203
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>ref|XM_370518.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG07015.4) partial mRNA
          Length = 1833

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   gcattccagcagcggtagg 34
            |||||||||||||||||||
Sbjct: 1813 gcattccagcagcggtagg 1795
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>ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfamily A (CYP3A) on
             chromosome 7
          Length = 428605

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    caaaaagaaaaagcaaagt 90
             |||||||||||||||||||
Sbjct: 25150 caaaaagaaaaagcaaagt 25132
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>gb|AC146138.2| Pan troglodytes BAC clone RP43-3D14 from 7, complete sequence
          Length = 176823

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    caaaaagaaaaagcaaagt 90
             |||||||||||||||||||
Sbjct: 49076 caaaaagaaaaagcaaagt 49094
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>gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, complete sequence
          Length = 170470

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    caaaaagaaaaagcaaagt 90
             |||||||||||||||||||
Sbjct: 20056 caaaaagaaaaagcaaagt 20038
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>gb|AC144621.3| Mus musculus BAC clone RP24-335I14 from chromosome 17, complete sequence
          Length = 207330

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      ctcagccacaggcaggcat 19
              |||||||||||||||||||
Sbjct: 130994 ctcagccacaggcaggcat 131012
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>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete
             sequence
          Length = 202525

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    aaccaaaaagaaaaagcaa 87
             |||||||||||||||||||
Sbjct: 48137 aaccaaaaagaaaaagcaa 48155
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>gb|AC011904.3| Homo sapiens BAC clone CTD-3244O18 from 7, complete sequence
          Length = 113879

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    caaaaagaaaaagcaaagt 90
             |||||||||||||||||||
Sbjct: 25150 caaaaagaaaaagcaaagt 25132
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>gb|AC130838.3| Mus musculus BAC clone RP24-369B4 from chromosome 12, complete sequence
          Length = 149814

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 79    aaaaagcaaagtgtaggagctgg 101
             ||||||||||||| |||||||||
Sbjct: 32379 aaaaagcaaagtggaggagctgg 32401
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>emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on chromosome 10 Contains the
             5' end of the CAMK2G gene for calcium/calmodulin-dependent
             protein kinase (CaM kinase) II gamma, the PLAU gene for
             plasminogen activator urokinase, three novel genes
             (FLJ35198), the 5' end of the VCL gene for vinculin and
             three CpG islands, complete sequence
          Length = 228098

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 6     ccacaggcaggcattccagcagc 28
             ||||||||||||| |||||||||
Sbjct: 38071 ccacaggcaggcactccagcagc 38049
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>gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, complete sequence
          Length = 223952

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     caaaaagaaaaagcaaagt 90
              |||||||||||||||||||
Sbjct: 117016 caaaaagaaaaagcaaagt 116998
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>emb|AL357293.16| Human DNA sequence from clone RP11-418K10 on chromosome 9, complete
             sequence
          Length = 104596

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    aaccaaaaagaaaaagcaa 87
             |||||||||||||||||||
Sbjct: 47800 aaccaaaaagaaaaagcaa 47782
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>emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chromosome 13 Contains a
            novel gene, complete sequence
          Length = 178323

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 68   gaaccaaaaagaaaaagca 86
            |||||||||||||||||||
Sbjct: 1192 gaaccaaaaagaaaaagca 1210
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>emb|AL109841.16|HSJ826I18 Human DNA sequence from clone RP5-826I18 on chromosome 20p12.2-13
             Contains part of the SLC23A2 gene for solute carrier
             family 23 (nucleobase transporters) member 2, complete
             sequence
          Length = 26187

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    caaaaagaaaaagcaaagt 90
             |||||||||||||||||||
Sbjct: 14976 caaaaagaaaaagcaaagt 14958
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>gb|AC157904.3| Mus musculus chromosome 18, clone RP23-379G12, complete sequence
          Length = 182922

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    aaagcaaagtgtaggagct 99
             |||||||||||||||||||
Sbjct: 77727 aaagcaaagtgtaggagct 77709
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>emb|Z92546.2|HS65A6 Human DNA sequence from clone CTA-65A6 on chromosome 22q11-12 Contains
             the 3' part of the gene for the ortholog of rat CAIN
             (KIAA0330), the gene for a novel Sushi domain (SCR repeat)
             containing protein similar to Mucins, ESTs, an STS, GSSs
             and two putative CpG islands, complete sequence
          Length = 73511

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     ccacaggcaggcattccag 24
             |||||||||||||||||||
Sbjct: 47049 ccacaggcaggcattccag 47031
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>gb|AC158238.2| Mus musculus BAC clone RP23-106F10 from chromosome 9, complete sequence
          Length = 242356

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    aaaaagaaaaagcaaagtg 91
             |||||||||||||||||||
Sbjct: 78391 aaaaagaaaaagcaaagtg 78409
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>emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BAC clone F1N13 (ESSA project)
          Length = 74687

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    ctttactcttttcccattt 64
             |||||||||||||||||||
Sbjct: 64573 ctttactcttttcccattt 64555
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>emb|CR931732.2| Medicago truncatula chromosome 5 clone mth2-117e11, COMPLETE SEQUENCE
          Length = 117393

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 65    tccgaaccaaaaagaaaaagcaa 87
             ||||||||||||| |||||||||
Sbjct: 39885 tccgaaccaaaaaaaaaaagcaa 39863
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>emb|BX323809.14| Zebrafish DNA sequence from clone DKEY-42J10 in linkage group 10,
              complete sequence
          Length = 194108

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     tttactcttttcccatttt 65
              |||||||||||||||||||
Sbjct: 116426 tttactcttttcccatttt 116408
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>gb|AC159903.3| Pan troglodytes BAC clone CH251-459A3 from chromosome unknown, complete
              sequence
          Length = 216963

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 68     gaaccaaaaagaaaaagca 86
              |||||||||||||||||||
Sbjct: 109819 gaaccaaaaagaaaaagca 109837
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>gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence
          Length = 195652

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      ccacaggcaggcattccag 24
              |||||||||||||||||||
Sbjct: 155739 ccacaggcaggcattccag 155721
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>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence
          Length = 165022

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     accaaaaagaaaaagcaaa 88
              |||||||||||||||||||
Sbjct: 115641 accaaaaagaaaaagcaaa 115659
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     aaaaagaaaaagcaaagtg 91
              |||||||||||||||||||
Sbjct: 753409 aaaaagaaaaagcaaagtg 753427
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>gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179151

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    aaaaagaaaaagcaaagtg 91
             |||||||||||||||||||
Sbjct: 86405 aaaaagaaaaagcaaagtg 86387
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>gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence
          Length = 148359

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    gaaccaaaaagaaaaagca 86
             |||||||||||||||||||
Sbjct: 22391 gaaccaaaaagaaaaagca 22409
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>gb|AC040161.5| Homo sapiens chromosome 16 clone CTC-420A11, complete sequence
          Length = 155279

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 95     gagctggtggtaggagcac 113
              |||||||||||||||||||
Sbjct: 143997 gagctggtggtaggagcac 144015
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>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence
          Length = 188292

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 72    caaaaagaaaaagcaaagtgtag 94
             ||||||| |||||||||||||||
Sbjct: 66594 caaaaaggaaaagcaaagtgtag 66572
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>gb|AC161370.3| Mus musculus BAC clone RP23-437J23 from chromosome 9, complete sequence
          Length = 187354

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 72     caaaaagaaaaagcaaagt 90
              |||||||||||||||||||
Sbjct: 155212 caaaaagaaaaagcaaagt 155230
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>dbj|AK035720.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
           enriched library, clone:9530095P05
           product:unclassifiable, full insert sequence
          Length = 1391

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  caaaaagaaaaagcaaagt 90
           |||||||||||||||||||
Sbjct: 997 caaaaagaaaaagcaaagt 979
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>gb|AC160649.2| Pan troglodytes BAC clone CH251-568N12 from chromosome unknown,
             complete sequence
          Length = 192241

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 76    aagaaaaagcaaagtgtag 94
             |||||||||||||||||||
Sbjct: 39732 aagaaaaagcaaagtgtag 39714
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>gb|AC004977.2|AC004977 Homo sapiens PAC clone RP5-1152C17 from 7, complete sequence
          Length = 106473

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    caaaaagaaaaagcaaagt 90
             |||||||||||||||||||
Sbjct: 70429 caaaaagaaaaagcaaagt 70411
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 138    caaacacaccgacgaaattaatc 160
              ||||||||| |||||||||||||
Sbjct: 544980 caaacacacggacgaaattaatc 545002
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>gb|AC138472.3| Homo sapiens chromosome 19 clone CTC-419E6, complete sequence
          Length = 126238

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 73    aaaaagaaaaagcaaagtgtagg 95
             |||||||||||| ||||||||||
Sbjct: 31025 aaaaagaaaaagaaaagtgtagg 31003
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>dbj|AB099782.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:
           OLDA-H9
          Length = 532

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 48  ttactcttttcccattttc 66
           |||||||||||||||||||
Sbjct: 241 ttactcttttcccattttc 223
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>gb|AC080091.5| Homo sapiens BAC clone RP11-802G5 from 2, complete sequence
          Length = 158813

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    gaaccaaaaagaaaaagca 86
             |||||||||||||||||||
Sbjct: 62668 gaaccaaaaagaaaaagca 62650
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>gb|AC116982.2| Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4,
             complete sequence
          Length = 256879

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 69    aaccaaaaagaaaaagcaaagtg 91
             ||||||||| |||||||||||||
Sbjct: 63899 aaccaaaaaaaaaaagcaaagtg 63921
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>gb|AC161282.5| Pan troglodytes BAC clone CH251-381O9 from chromosome unknown,
            complete sequence
          Length = 172427

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   aagaaaaagcaaagtgtag 94
            |||||||||||||||||||
Sbjct: 1687 aagaaaaagcaaagtgtag 1705
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>gb|AC073898.1|AC073898 Homo sapiens chromosome 19 BAC BC311202 (CIT-HSPC_419E6), complete
             sequence
          Length = 125428

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 73    aaaaagaaaaagcaaagtgtagg 95
             |||||||||||| ||||||||||
Sbjct: 94403 aaaaagaaaaagaaaagtgtagg 94425
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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0007D08
          Length = 183142

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 138    caaacacaccgacgaaattaatc 160
              ||||||||| |||||||||||||
Sbjct: 134940 caaacacacggacgaaattaatc 134962
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>emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f16, COMPLETE SEQUENCE
          Length = 109924

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    tactcttttcccattttcc 67
             |||||||||||||||||||
Sbjct: 10025 tactcttttcccattttcc 10043
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>gb|AF001415.1|AF001415 Arabidopsis thaliana 14-3-3-like protein GF14 upsilon (GRF5) gene,
           complete cds
          Length = 4362

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 46  ctttactcttttcccattt 64
           |||||||||||||||||||
Sbjct: 817 ctttactcttttcccattt 835
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>emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-785G15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174273

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    aagaaaaagcaaagtgtag 94
             |||||||||||||||||||
Sbjct: 79259 aagaaaaagcaaagtgtag 79277
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>gb|AC102173.15| Mus musculus chromosome 18, clone RP23-472D7, complete sequence
          Length = 185768

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    aaagcaaagtgtaggagct 99
             |||||||||||||||||||
Sbjct: 29109 aaagcaaagtgtaggagct 29091
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>gb|DQ326649.1| Uncultured bacterium clone E088 16S ribosomal RNA gene, partial
           sequence
          Length = 1371

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 48  ttactcttttcccattttc 66
           |||||||||||||||||||
Sbjct: 221 ttactcttttcccattttc 203
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>gb|AC004804.1|AC004804 Homo sapiens 12p13.3 PAC RPCI5-927J10 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 108879

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 68    gaaccaaaaagaaaaagcaaagt 90
             |||||||||| ||||||||||||
Sbjct: 54120 gaaccaaaaacaaaaagcaaagt 54142
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>gb|AC139330.4| Mus musculus BAC clone RP24-206O6 from 12, complete sequence
          Length = 176663

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 79    aaaaagcaaagtgtaggagctgg 101
             ||||||||||||| |||||||||
Sbjct: 33129 aaaaagcaaagtggaggagctgg 33107
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>gb|AC151413.2| Mus musculus BAC clone RP23-103N6 from 19, complete sequence
          Length = 230420

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 73     aaaaagaaaaagcaaagtgtaggagct 99
              ||||| ||||||||||||| |||||||
Sbjct: 170168 aaaaaaaaaaagcaaagtgaaggagct 170142
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>gb|L47334.1|HUM19ANON1 Human DNA from cosmid f23280 from chromosome 19q13.2, genomic
            sequence
          Length = 37940

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 73   aaaaagaaaaagcaaagtgtagg 95
            |||||||||||| ||||||||||
Sbjct: 7160 aaaaagaaaaagaaaagtgtagg 7138
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>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete
             sequence
          Length = 174188

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    accaaaaagaaaaagcaaa 88
             |||||||||||||||||||
Sbjct: 55472 accaaaaagaaaaagcaaa 55454
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>dbj|AP000353.2| Homo sapiens genomic DNA, chromosome 22q11.2, IGLL region,
             clone:KB318B8
          Length = 123828

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     ccacaggcaggcattccag 24
             |||||||||||||||||||
Sbjct: 58148 ccacaggcaggcattccag 58166
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>dbj|AP005272.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-172F10, complete
             sequence
          Length = 164943

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 72    caaaaagaaaaagcaaagtgtag 94
             |||||| ||||||||||||||||
Sbjct: 92409 caaaaaaaaaaagcaaagtgtag 92387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,816,955
Number of Sequences: 3902068
Number of extensions: 2816955
Number of successful extensions: 198412
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 198087
Number of HSP's gapped (non-prelim): 325
length of query: 199
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 177
effective length of database: 17,147,199,772
effective search space: 3035054359644
effective search space used: 3035054359644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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