>gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 1 of
              11 of the complete sequence
          Length = 250029

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 153    tcaaatcctaggactctgtggg 174
              ||||||||||||||||||||||
Sbjct: 119793 tcaaatcctaggactctgtggg 119814

>emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chromosome 13 Contains the
              SLC10A2 gene for solute carrier family 10 (sodium/bile acid
              cotransporter family, member 2, complete sequence
          Length = 171132

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 153    tcaaatcctaggactctgtggg 174
              ||||||||||||||||||||||
Sbjct: 100967 tcaaatcctaggactctgtggg 100988

>emb|AL732592.10| Mouse DNA sequence from clone RP23-18O23 on chromosome 11, complete
             sequence
          Length = 57988

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 36    acatcaggtacatattacaatc 57
             ||||||||||||||||||||||
Sbjct: 13041 acatcaggtacatattacaatc 13020

>gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome 13, complete sequence
          Length = 213306

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 145   taggagggtcaaatcctaggactctg 170
             ||||||||||||| ||||||||||||
Sbjct: 40530 taggagggtcaaagcctaggactctg 40555

>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete
              sequence
          Length = 219800

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 145    taggagggtcaaatcctaggactctg 170
              ||||||||||||| ||||||||||||
Sbjct: 205613 taggagggtcaaagcctaggactctg 205638

>ref|XM_816442.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506885.330) partial mRNA
          Length = 3045

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  ggcagcaggagcagcacgatc 222
            |||||||||||||||||||||
Sbjct: 1349 ggcagcaggagcagcacgatc 1369

>gb|AC113558.8| Homo sapiens chromosome 18, clone RP11-1130K19, complete sequence
          Length = 165957

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    caaattacacgcactgaaaag 132
              |||||||||||||||||||||
Sbjct: 138927 caaattacacgcactgaaaag 138947

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 204    cagcaggagcagcacgatcca 224
              |||||||||||||||||||||
Sbjct: 909409 cagcaggagcagcacgatcca 909389

>gb|AC009453.13|AC009453 Homo sapiens chromosome 18, clone RP11-59F14, complete sequence
          Length = 168947

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   caaattacacgcactgaaaag 132
             |||||||||||||||||||||
Sbjct: 91592 caaattacacgcactgaaaag 91572

>gb|AY312363.1| Gallus gallus cHz-cadherin mRNA, complete cds
          Length = 8460

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 196  gatgggggcagcaggagcagcacg 219
            |||||||||| |||||||||||||
Sbjct: 2719 gatgggggcaacaggagcagcacg 2742

>ref|NM_001001754.1| Gallus gallus cHz-cadherin (LOC414835), mRNA
          Length = 8460

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 196  gatgggggcagcaggagcagcacg 219
            |||||||||| |||||||||||||
Sbjct: 2719 gatgggggcaacaggagcagcacg 2742

>gb|AE012406.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 314
            of 460 of the complete genome
          Length = 13368

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 201  gggcagcaggagcagcacga 220
            ||||||||||||||||||||
Sbjct: 5708 gggcagcaggagcagcacga 5689

>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 208    aggagcagcacgatccaccgcagc 231
              ||||||||||||||||| ||||||
Sbjct: 776954 aggagcagcacgatccatcgcagc 776977

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 201     gggcagcaggagcagcacga 220
               ||||||||||||||||||||
Sbjct: 1441934 gggcagcaggagcagcacga 1441953

>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete
             sequence
          Length = 194274

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aagtctagcagcagaaaaga 93
             ||||||||||||||||||||
Sbjct: 73671 aagtctagcagcagaaaaga 73690

>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence
          Length = 203314

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     aagtctagcagcagaaaaga 93
              ||||||||||||||||||||
Sbjct: 185027 aagtctagcagcagaaaaga 185008

>gb|AC165291.2| Mus musculus BAC clone RP23-330N2 from chromosome 17, complete sequence
          Length = 206353

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     ggagaaagtctagcagcaga 88
              ||||||||||||||||||||
Sbjct: 139117 ggagaaagtctagcagcaga 139098


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,927,779
Number of Sequences: 3902068
Number of extensions: 1927779
Number of successful extensions: 42628
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42589
Number of HSP's gapped (non-prelim): 39
length of query: 243
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 221
effective length of database: 17,147,199,772
effective search space: 3789531149612
effective search space used: 3789531149612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)