| Clone Name | rbast17b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_384504.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04328.1) partial mRNA Length = 3987 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccccagctaatagagttctt 96 |||||||||||||||||||| Sbjct: 1370 ccccagctaatagagttctt 1351
>emb|BX001038.6| Zebrafish DNA sequence from clone CH211-12M10 in linkage group 17, complete sequence Length = 180659 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gagtgtagatttcaaaattg 20 |||||||||||||||||||| Sbjct: 118460 gagtgtagatttcaaaattg 118479
>gb|AE017308.1| Mycoplasma mobile 163K complete genome Length = 777079 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gatttcaaaattgagatat 26 ||||||||||||||||||| Sbjct: 530230 gatttcaaaattgagatat 530248
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gatttcaaaattgagatat 26 ||||||||||||||||||| Sbjct: 143527 gatttcaaaattgagatat 143545
>ref|XM_417184.1| PREDICTED: Gallus gallus similar to putative capacitative calcium entry channel (LOC418989), mRNA Length = 2694 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 aaatatcaccatgaacttg 71 ||||||||||||||||||| Sbjct: 1899 aaatatcaccatgaacttg 1881
>gb|AC125359.4| Mus musculus BAC clone RP23-102I17 from chromosome 14, complete sequence Length = 192163 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gagtgtagatttcaaaatt 19 ||||||||||||||||||| Sbjct: 97895 gagtgtagatttcaaaatt 97877
>gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, complete sequence Length = 126394 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 tgtagatttcaaaattgag 22 ||||||||||||||||||| Sbjct: 125983 tgtagatttcaaaattgag 126001
>gb|AC079178.20| Homo sapiens Xp BAC RP11-702C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114665 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 gttacacaaatatcaccat 64 ||||||||||||||||||| Sbjct: 102227 gttacacaaatatcaccat 102245
>dbj|AK157245.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830208B07 product:interleukin 1 beta, full insert sequence Length = 3738 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ccccagctaatagagttct 95 ||||||||||||||||||| Sbjct: 1823 ccccagctaatagagttct 1841
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gatttcaaaattgagatat 26 ||||||||||||||||||| Sbjct: 27021141 gatttcaaaattgagatat 27021159
>gb|AC087073.6| Homo sapiens BAC clone RP11-752H12 from 2, complete sequence Length = 141441 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 tttcaaaattgagatatgt 28 ||||||||||||||||||| Sbjct: 34743 tttcaaaattgagatatgt 34725
>gb|AC073283.8| Homo sapiens BAC clone RP11-761B3 from 2, complete sequence Length = 181720 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 aaattgagatatgtactgtgatt 37 ||||||||||||||| ||||||| Sbjct: 54443 aaattgagatatgtattgtgatt 54421
>gb|AC106817.2| Homo sapiens chromosome 5 clone RP11-636F7, complete sequence Length = 169232 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 tgtagatttcaaaattgag 22 ||||||||||||||||||| Sbjct: 159939 tgtagatttcaaaattgag 159921
>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19, complete sequence Length = 168515 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 tcagtaagcgcacacatcg 117 ||||||||||||||||||| Sbjct: 8341 tcagtaagcgcacacatcg 8359
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gatttcaaaattgagatat 26 ||||||||||||||||||| Sbjct: 26946730 gatttcaaaattgagatat 26946748
>emb|CR383665.9| Zebrafish DNA sequence from clone DKEY-3G23 in linkage group 14, complete sequence Length = 120923 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 aaattgagatatgtactgt 33 ||||||||||||||||||| Sbjct: 18457 aaattgagatatgtactgt 18439
>emb|AL808143.5| Mouse DNA sequence from clone RP23-384K11 on chromosome 2, complete sequence Length = 202474 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ccccagctaatagagttct 95 ||||||||||||||||||| Sbjct: 14820 ccccagctaatagagttct 14802
>emb|X04964.1|MMIL1BG Murine interleukin 1-beta gene Length = 7100 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 ccccagctaatagagttct 95 ||||||||||||||||||| Sbjct: 5131 ccccagctaatagagttct 5149 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,128,882 Number of Sequences: 3902068 Number of extensions: 1128882 Number of successful extensions: 75300 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75228 Number of HSP's gapped (non-prelim): 72 length of query: 130 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 109 effective length of database: 17,151,101,840 effective search space: 1869470100560 effective search space used: 1869470100560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)