| Clone Name | rbast16h08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 atcctacagcctacaggccatc 93 |||||||||||||||||||||| Sbjct: 23100927 atcctacagcctacaggccatc 23100906
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 atcctacagcctacaggccatc 93 |||||||||||||||||||||| Sbjct: 67965 atcctacagcctacaggccatc 67944
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gaagatacgtatacaaaaata 124 ||||||||||||||||||||| Sbjct: 568981 gaagatacgtatacaaaaata 569001
>ref|XM_569464.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC02030) partial mRNA Length = 1584 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 gaagatacgtatacaaaaata 124 ||||||||||||||||||||| Sbjct: 151 gaagatacgtatacaaaaata 131
>emb|AL512506.8| Human DNA sequence from clone RP11-5G9 on chromosome 13 Contains the 5' end of a novel gene, parts of 2 novel genes, a diacylglycerol kinase pseudogene and a CpG island, complete sequence Length = 167875 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 atacgtatacaaaaataaag 127 |||||||||||||||||||| Sbjct: 39768 atacgtatacaaaaataaag 39787
>emb|AL136313.27| Human DNA sequence from clone RP4-551N11 on chromosome 6, complete sequence Length = 128152 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 caacaatcctacagcctaca 86 |||||||||||||||||||| Sbjct: 64418 caacaatcctacagcctaca 64437
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 atcctacagcctacaggcca 91 |||||||||||||||||||| Sbjct: 181227 atcctacagcctacaggcca 181208
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 atcctacagcctacaggcca 91 |||||||||||||||||||| Sbjct: 1679 atcctacagcctacaggcca 1660 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,494,169 Number of Sequences: 3902068 Number of extensions: 2494169 Number of successful extensions: 41782 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41753 Number of HSP's gapped (non-prelim): 29 length of query: 284 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 262 effective length of database: 17,147,199,772 effective search space: 4492566340264 effective search space used: 4492566340264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)