ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast16e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PURQ_THEAC (Q9HIM1) Phosphoribosylformylglycinamidine synthase I... 28 5.5
2NUDH_PHOLL (Q7N8U7) Probable (di)nucleoside polyphosphate hydrol... 27 9.4

>PURQ_THEAC (Q9HIM1) Phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3)|
           (FGAM synthase I)
          Length = 257

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 214 SSNKVTEYECMDPFVTLTEVSAIFLCTDGSRGFLQVPPVHVK 339
           ++N+   +EC   ++T+T  + IF      +G  QVP  H +
Sbjct: 117 TNNESGRFECRYTYITMTSDNPIFRDAFKGKGSFQVPVAHAE 158



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>NUDH_PHOLL (Q7N8U7) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 176

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -3

Query: 201 TPDFDSMMHVSYHY-----IDSQRDSIAEVQRKLLYWDIPKEEIIAVPVLSNLY 55
           TP+FD    VSY Y     +  +RD    V ++     +P +E +++P  S  Y
Sbjct: 118 TPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMPMQESVSLPRSSYSY 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,599,885
Number of Sequences: 219361
Number of extensions: 981923
Number of successful extensions: 2583
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2582
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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