ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast16d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing pro... 29 2.6
2DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Re... 28 7.5
3FKH_DROME (P14734) Fork head protein 27 9.8

>REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing protein 1|
           (RalBP1-interacting protein 1)
          Length = 744

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +3

Query: 135 QIFIHASQNMNLSRKDISRCHPSLLPALSSGLHASLPASSSRNRRSDA 278
           Q  + A+ N+N  + D +  HP +LPA      AS PASS R  ++D+
Sbjct: 580 QFEVFAASNVNDEQDDEAEKHPEVLPAEK----ASDPASSLRVAKTDS 623



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>DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Regulatory|
           protein UGA35)
          Length = 970

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 198 PSLLPALSSGLHASLPASSSRNRRSDATFHSNRCP 302
           P+ L   SSG + ++P SS+  R  +   +SNR P
Sbjct: 185 PNYLKRTSSGANNNMPTSSNSKRMKNFEDYSNRLP 219



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>FKH_DROME (P14734) Fork head protein|
          Length = 510

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 147 HASQNMNLSRKDISRCHPSLLPALSSGLH 233
           H  Q   LS    +RCHPSL+    S +H
Sbjct: 408 HQLQQEELSAMMANRCHPSLITDYHSSMH 436


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,044,029
Number of Sequences: 219361
Number of extensions: 593045
Number of successful extensions: 1477
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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