ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast16b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, com... 42 0.30
2gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, com... 42 0.30
3gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, com... 42 0.30
4gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p... 42 0.30
5gb|AC132096.4| Mus musculus BAC clone RP24-392H7 from chromosome... 42 0.30
6emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chro... 42 0.30
7gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, co... 40 1.2
8gb|AC003119.1|HUAC003119 Human Chromosome 16 BAC clone CIT987SK-... 40 1.2
9gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, com... 40 1.2
10emb|BX927351.14| Zebrafish DNA sequence from clone DKEY-59K9 in ... 40 1.2
11emb|AL512598.11| Human DNA sequence from clone RP11-165A20 on ch... 40 1.2
12emb|AL445469.4| Human DNA sequence from clone RP11-254N18 on chr... 40 1.2
13gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, co... 40 1.2
14emb|X56564.1|SPRPB1 S. pombe rpb1 gene for the largest subunit o... 40 1.2
15emb|CR860814.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2014 (from cl... 40 1.2
16emb|AL121795.1|SPBC28F2 S.pombe chromosome II cosmid c28F2 40 1.2
17emb|CR860036.1| Pongo pygmaeus mRNA; cDNA DKFZp459G0524 (from cl... 40 1.2
18dbj|AK124767.1| Homo sapiens cDNA FLJ42777 fis, clone BRAWH3005132 40 1.2
19gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complet... 40 1.2
20gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold 40 1.2
21ref|NM_001021568.1| Schizosaccharomyces pombe 972h- DNA-directed... 40 1.2
22emb|BX649290.6| Zebrafish DNA sequence from clone DKEYP-10B2 in ... 40 1.2
23emb|BX005477.7| Zebrafish DNA sequence from clone CH211-131K10 i... 40 1.2
24emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 i... 40 1.2
25emb|AJ329208.1|HSA329208 Homo sapiens genomic sequence surroundi... 40 1.2
26gb|AY826175.1|AY826175S1 Dichotomaria diesingiana large subunit ... 40 1.2
27emb|AL840627.7| Zebrafish DNA sequence from clone CH211-278B16 i... 40 1.2
28dbj|AP002439.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 1.2
29gb|AC149416.1| Phakopsora pachyrhizi clone JGIAFNA-77J12, comple... 38 4.8
30gb|AC006729.1| Caenorhabditis elegans cosmid Y24D9A, complete se... 38 4.8
31gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, comp... 38 4.8
32gb|BC068167.1| Mus musculus potassium inwardly-rectifying channe... 38 4.8
33gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome ... 38 4.8
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 4.8
35gb|AC166969.4| Mus musculus chromosome 1, clone RP23-226P1, comp... 38 4.8
36emb|CR352226.16| Zebrafish DNA sequence from clone CH211-209L18 ... 38 4.8
37gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, comple... 38 4.8
38gb|AC107761.9| Mus musculus chromosome 7, clone RP23-184M3, comp... 38 4.8
39emb|BX908797.10| Zebrafish DNA sequence from clone DKEY-43P13 in... 38 4.8
40emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in ... 38 4.8
41emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in... 38 4.8
42emb|AL590037.7| Human DNA sequence from clone RP11-129K24 on chr... 38 4.8
43emb|AL161892.9| Human DNA sequence from clone RP11-173N7 on chro... 38 4.8
44emb|AL138765.18| Human DNA sequence from clone RP11-34E5 on chro... 38 4.8
45emb|AL138733.15| Human DNA sequence from clone RP1-297M16 on chr... 38 4.8
46emb|AL137181.8| Human DNA sequence from clone RP1-23O21 on chrom... 38 4.8
47gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 38 4.8
48emb|AL672145.5| Zebrafish DNA sequence from clone BUSM1-182H3 Co... 38 4.8
49emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in ... 38 4.8
50gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105... 38 4.8
51gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cance... 38 4.8
52gb|AC114550.4| Homo sapiens chromosome 8, clone CTD-3023L14, com... 38 4.8
53gb|AF403133.1|AF403132S2 Mus musculus G protein-gated K+ channel... 38 4.8
54gb|AC023150.5| Homo sapiens BAC clone RP11-709L9 from 4, complet... 38 4.8
55gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genom... 38 4.8
56dbj|AB168838.1| Macaca fascicularis testis cDNA, clone: QtsA-152... 38 4.8
57emb|BX324142.7| Zebrafish DNA sequence from clone CH211-196F19 i... 38 4.8
58gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome... 38 4.8
59dbj|AK046778.1| Mus musculus 10 days neonate medulla oblongata c... 38 4.8
60dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.8
61dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.8
62gb|AC110086.3| Homo sapiens BAC clone RP11-624F4 from 2, complet... 38 4.8
63gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, comple... 38 4.8
64gb|AC137579.3| Homo sapiens chromosome 8, clone RP11-346L1, comp... 38 4.8
65gb|AC124067.10| Homo sapiens chromosome 8, clone RP11-150O12, co... 38 4.8
66gb|AC013262.7| Homo sapiens BAC clone RP11-89C12 from 2, complet... 38 4.8
67dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 38 4.8
68emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 i... 38 4.8
69emb|AJ515535.1|AHI515535 Antirrhinum hispanicum slf-S1E gene for... 38 4.8
70emb|BX539310.9| Zebrafish DNA sequence from clone DKEY-19C16 in ... 38 4.8
71dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.8
72dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.8
73gb|AC005004.3|AC005004 Homo sapiens PAC clone RP3-403E2 from 22,... 38 4.8
74emb|Z73969.1|CEC12D8 Caenorhabditis elegans Cosmid C12D8, comple... 38 4.8
75gb|AC156581.4| Pan troglodytes BAC clone CH251-372H22 from chrom... 38 4.8
76gb|AC007066.4|AC007066 Homo sapiens chromosome 9, clone hRPK.355... 38 4.8
77dbj|AP006302.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 38 4.8
78emb|AL031620.1|CEC18B12 Caenorhabditis elegans Cosmid C18B12, co... 38 4.8
79emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in... 38 4.8
80emb|AL928583.10| Mouse DNA sequence from clone RP23-287C12 on ch... 38 4.8
81emb|AL929253.5| Mouse DNA sequence from clone RP23-350F14 on chr... 38 4.8
82emb|AL731558.14| Mouse DNA sequence from clone RP23-235D11 on ch... 38 4.8
83dbj|AP000068.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 38 4.8 
>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence
          Length = 220003

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     tcacctttggggaaaataaaa 102
              |||||||||||||||||||||
Sbjct: 202451 tcacctttggggaaaataaaa 202471
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>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence
          Length = 184672

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 12    aaaaaatgaaaggaaatgggggaaaaatt 40
             |||||| ||||||||| ||||||||||||
Sbjct: 34188 aaaaaaggaaaggaaaagggggaaaaatt 34216
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>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence
          Length = 197616

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 15     aaatgaaaggaaatgggggaaaaat 39
              ||||||||||||| |||||||||||
Sbjct: 165521 aaatgaaaggaaaagggggaaaaat 165545
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>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete
              sequence
          Length = 213611

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 15     aaatgaaaggaaatgggggaaaaat 39
              ||||||||||||| |||||||||||
Sbjct: 114836 aaatgaaaggaaaagggggaaaaat 114860
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>gb|AC132096.4| Mus musculus BAC clone RP24-392H7 from chromosome 7, complete sequence
          Length = 114183

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    tcacctttggggaaaataaaa 102
             |||||||||||||||||||||
Sbjct: 49679 tcacctttggggaaaataaaa 49659
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>emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chromosome 4, complete
             sequence
          Length = 199350

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    atgaaaggaaatgggggaaaa 37
             |||||||||||||||||||||
Sbjct: 80780 atgaaaggaaatgggggaaaa 80760
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>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence
          Length = 154206

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   aatatcaaatgatctgacag 76
            ||||||||||||||||||||
Sbjct: 8775 aatatcaaatgatctgacag 8794
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>gb|AC003119.1|HUAC003119 Human Chromosome 16 BAC clone CIT987SK-27D10, complete sequence
          Length = 88036

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    caatatcaaatgatctgaca 75
             ||||||||||||||||||||
Sbjct: 40682 caatatcaaatgatctgaca 40701
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>gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, complete sequence
          Length = 217813

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 2     cttttgctccaaaaaatgaaaggaaatg 29
             |||||||| || ||||||||||||||||
Sbjct: 32117 cttttgcttcataaaatgaaaggaaatg 32144
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>emb|BX927351.14| Zebrafish DNA sequence from clone DKEY-59K9 in linkage group 17,
             complete sequence
          Length = 180081

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    acctttggggaaaataaaag 103
             ||||||||||||||||||||
Sbjct: 77338 acctttggggaaaataaaag 77357
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>emb|AL512598.11| Human DNA sequence from clone RP11-165A20 on chromosome 10 Contains the
             5' end of the gene for HHGP protein (HHGP) (FLJ11888), the
             gene for a novel protein similar to secreted
             frizzled-related protein 4 SFRP4 (FLJ37702), the gene for
             a novel protein similar to threonine synthase, containing
             FLJ2202 and  FLJ37043 and two CpG islands, complete
             sequence
          Length = 139491

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aaatgaaaggaaatggggga 34
             ||||||||||||||||||||
Sbjct: 76090 aaatgaaaggaaatggggga 76071
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>emb|AL445469.4| Human DNA sequence from clone RP11-254N18 on chromosome 1 Contains part
             of the ACBD6 gene for acyl-Coenzyme A binding domain
             containing 6 and a voltage-dependent anion channel 1
             (VDAC1) pseudogene, complete sequence
          Length = 129504

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 2     cttttgctccaaaaaatgaaaggaaatg 29
             |||||| ||||||||||||| |||||||
Sbjct: 10455 cttttggtccaaaaaatgaacggaaatg 10482
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>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence
          Length = 150125

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aatatcaaatgatctgacag 76
             ||||||||||||||||||||
Sbjct: 51499 aatatcaaatgatctgacag 51480
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>emb|X56564.1|SPRPB1 S. pombe rpb1 gene for the largest subunit of RNA polymerase II
          Length = 7079

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tcacctttggggaaaataaa 101
            ||||||||||||||||||||
Sbjct: 4069 tcacctttggggaaaataaa 4050
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>emb|CR860814.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2014 (from clone DKFZp469P2014)
          Length = 3827

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  aaatgaaaggaaatggggga 34
           ||||||||||||||||||||
Sbjct: 121 aaatgaaaggaaatggggga 102
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>emb|AL121795.1|SPBC28F2 S.pombe chromosome II cosmid c28F2
          Length = 39320

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    tcacctttggggaaaataaa 101
             ||||||||||||||||||||
Sbjct: 22052 tcacctttggggaaaataaa 22033
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>emb|CR860036.1| Pongo pygmaeus mRNA; cDNA DKFZp459G0524 (from clone DKFZp459G0524)
          Length = 3766

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ttttgctccaaaaaatgaaa 22
            ||||||||||||||||||||
Sbjct: 2721 ttttgctccaaaaaatgaaa 2702
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>dbj|AK124767.1| Homo sapiens cDNA FLJ42777 fis, clone BRAWH3005132
          Length = 3708

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  aaatgaaaggaaatggggga 34
           ||||||||||||||||||||
Sbjct: 217 aaatgaaaggaaatggggga 236
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>gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complete sequence
          Length = 162214

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 12     aaaaaatgaaaggaaatgggggaaaaat 39
              |||||| ||||||||| |||||||||||
Sbjct: 114394 aaaaaaggaaaggaaaagggggaaaaat 114421
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>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold
          Length = 583711

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     cacctttggggaaaataaaa 102
              ||||||||||||||||||||
Sbjct: 490096 cacctttggggaaaataaaa 490077
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>ref|NM_001021568.1| Schizosaccharomyces pombe 972h- DNA-directed RNA polymerase II
            largest subunit (SPBC28F2.12), partial mRNA
          Length = 5259

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tcacctttggggaaaataaa 101
            ||||||||||||||||||||
Sbjct: 2861 tcacctttggggaaaataaa 2842
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>emb|BX649290.6| Zebrafish DNA sequence from clone DKEYP-10B2 in linkage group 17,
             complete sequence
          Length = 128837

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    acctttggggaaaataaaag 103
             ||||||||||||||||||||
Sbjct: 75184 acctttggggaaaataaaag 75165
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>emb|BX005477.7| Zebrafish DNA sequence from clone CH211-131K10 in linkage group 13,
              complete sequence
          Length = 169924

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     aaaaaatgaaaggaaatgggggaa 35
              |||||||||||||||||| |||||
Sbjct: 139326 aaaaaatgaaaggaaatgagggaa 139349
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>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17,
             complete sequence
          Length = 187548

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    aaatgaaaggaaatgggggaaaaa 38
             |||||||| |||||||||||||||
Sbjct: 71461 aaatgaaatgaaatgggggaaaaa 71484
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>emb|AJ329208.1|HSA329208 Homo sapiens genomic sequence surrounding NotI site, clone
           NB6-1013R
          Length = 1100

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  aaatgggggaaaaatttccc 44
           ||||||||||||||||||||
Sbjct: 856 aaatgggggaaaaatttccc 875
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>gb|AY826175.1|AY826175S1 Dichotomaria diesingiana large subunit ribosomal RNA gene, partial
            sequence
          Length = 2731

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   gaaaggaaatgggggaaaaa 38
            ||||||||||||||||||||
Sbjct: 2511 gaaaggaaatgggggaaaaa 2492
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>emb|AL840627.7| Zebrafish DNA sequence from clone CH211-278B16 in linkage group 17,
              complete sequence
          Length = 164375

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gaaaggaaatgggggaaaaa 38
              ||||||||||||||||||||
Sbjct: 115276 gaaaggaaatgggggaaaaa 115295
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>dbj|AP002439.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-691H4, complete
             sequence
          Length = 188604

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    caactcacctttggggaaaa 97
             ||||||||||||||||||||
Sbjct: 86691 caactcacctttggggaaaa 86710
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>gb|AC149416.1| Phakopsora pachyrhizi clone JGIAFNA-77J12, complete sequence
          Length = 34472

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    ctttggggaaaataaaaga 104
             |||||||||||||||||||
Sbjct: 18148 ctttggggaaaataaaaga 18166
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>gb|AC006729.1| Caenorhabditis elegans cosmid Y24D9A, complete sequence
          Length = 41172

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     tccaaaaaatgaaaggaaa 27
             |||||||||||||||||||
Sbjct: 37179 tccaaaaaatgaaaggaaa 37197
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>gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, complete sequence
          Length = 218109

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 19     gaaaggaaatgggggaaaaatttccca 45
              |||||| ||||||||||||| ||||||
Sbjct: 154832 gaaagggaatgggggaaaaagttccca 154858
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>gb|BC068167.1| Mus musculus potassium inwardly-rectifying channel, subfamily J,
            member 3, mRNA (cDNA clone IMAGE:30543982), with apparent
            retained intron
          Length = 5233

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aatatcaaatgatctgaca 75
            |||||||||||||||||||
Sbjct: 3751 aatatcaaatgatctgaca 3769
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>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence
          Length = 205920

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     aaaggaaatgggggaaaaa 38
              |||||||||||||||||||
Sbjct: 114551 aaaggaaatgggggaaaaa 114569
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 53       ttgcaatatcaaatgatct 71
                |||||||||||||||||||
Sbjct: 23724091 ttgcaatatcaaatgatct 23724109
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>gb|AC166969.4| Mus musculus chromosome 1, clone RP23-226P1, complete sequence
          Length = 160078

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 19   gaaaggaaatgggggaaaaatttccca 45
            |||||| ||||||||||||| ||||||
Sbjct: 8201 gaaagggaatgggggaaaaagttccca 8227
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>emb|CR352226.16| Zebrafish DNA sequence from clone CH211-209L18 in linkage group 22,
              complete sequence
          Length = 209197

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     aaaaaatgaaaggaaatgg 30
              |||||||||||||||||||
Sbjct: 186418 aaaaaatgaaaggaaatgg 186400
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>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence
          Length = 221920

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aaaggaaatgggggaaaaa 38
             |||||||||||||||||||
Sbjct: 65795 aaaggaaatgggggaaaaa 65813
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>gb|AC107761.9| Mus musculus chromosome 7, clone RP23-184M3, complete sequence
          Length = 216757

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     aaaaaatgaaaggaaatgg 30
              |||||||||||||||||||
Sbjct: 116801 aaaaaatgaaaggaaatgg 116783
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>emb|BX908797.10| Zebrafish DNA sequence from clone DKEY-43P13 in linkage group 3,
             complete sequence
          Length = 222385

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    aaaaaatgaaaggaaatgg 30
             |||||||||||||||||||
Sbjct: 73466 aaaaaatgaaaggaaatgg 73484
to top
>emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in linkage group 5, complete
              sequence
          Length = 190731

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 14     aaaatgaaaggaaatgggggaaa 36
              ||||||||||||||||| |||||
Sbjct: 152874 aaaatgaaaggaaatggtggaaa 152852
to top
>emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in linkage group 14,
              complete sequence
          Length = 260668

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaaaatgaaaggaaatgg 30
              |||||||||||||||||||
Sbjct: 147647 aaaaaatgaaaggaaatgg 147665
to top
>emb|AL590037.7| Human DNA sequence from clone RP11-129K24 on chromosome 6 Contains the
             5' end of a variant of the BPAG1 gene for bullous
             pemphigoid antigen 1 (230/240kD), the 5' end of a novel
             gene, a novel pseudogene, a ferritin heavy polypeptide 1
             (FTH1) pseudogene and a CpG island, complete sequence
          Length = 94153

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    aaaaaatgaaaggaaatgg 30
             |||||||||||||||||||
Sbjct: 59582 aaaaaatgaaaggaaatgg 59564
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>emb|AL161892.9| Human DNA sequence from clone RP11-173N7 on chromosome 13 Contains a
             pseudogene similar to part of a novel gene (MGC5466), a
             breast carcinoma amplified sequence 2 (DAM1, BCAS2)
             pseudogene and a CpG island, complete sequence
          Length = 146216

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    aaaaatgaaaggaaatggg 31
             |||||||||||||||||||
Sbjct: 11619 aaaaatgaaaggaaatggg 11601
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>emb|AL138765.18| Human DNA sequence from clone RP11-34E5 on chromosome 10 Contains the
             SMBP gene for SM-11044 binding protein (SMBP)(EP70-P-iso),
             the TLL2 gene for  tolloid-like 2, a nucleophosmin
             (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM,
             NUMATRIN) pseudogene, a ribosomal protein S2
             (RPS2)(LLREP3) pseudogene, the 3' end of the gene for a
             novel protein (possible ortholog of mouse
             phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)) and
             two CpG islands, complete sequence
          Length = 162820

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 12    aaaaaatgaaaggaaatgggggaaaaa 38
             |||||| ||||| ||||||||||||||
Sbjct: 81320 aaaaaaagaaagaaaatgggggaaaaa 81346
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>emb|AL138733.15| Human DNA sequence from clone RP1-297M16 on chromosome 6 Contains part
             of a novel gene and a novel gene, complete sequence
          Length = 65582

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 3     ttttgctccaaaaaatgaaaggaaatg 29
             |||| ||||||||||||||| ||||||
Sbjct: 24299 tttttctccaaaaaatgaaaagaaatg 24273
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>emb|AL137181.8| Human DNA sequence from clone RP1-23O21 on chromosome 6 Contains an
             acidic calponin 3 (CNN3) pseudogene, complete sequence
          Length = 60248

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tgctccaaaaaatgaaagg 24
             |||||||||||||||||||
Sbjct: 53562 tgctccaaaaaatgaaagg 53580
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 42      cccatgtaaggttgcaata 60
               |||||||||||||||||||
Sbjct: 2867904 cccatgtaaggttgcaata 2867922
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>emb|AL672145.5| Zebrafish DNA sequence from clone BUSM1-182H3 Contains the slc40a1 gene
             (solute carrier family 40 (iron-regulated transporter),
             member 1), a novel gene and the 5' part of a gene similar
             to STAT4 (signal transducer and activator of transcription
             4), complete sequence
          Length = 98868

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    aaaaaatgaaaggaaatgg 30
             |||||||||||||||||||
Sbjct: 28163 aaaaaatgaaaggaaatgg 28181
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>emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in linkage group 2,
             complete sequence
          Length = 249584

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 12    aaaaaatgaaaggaaatgggggaaaaa 38
             |||||||||||| |||||||| |||||
Sbjct: 31879 aaaaaatgaaagtaaatggggcaaaaa 31853
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>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence
          Length = 222520

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aaaggaaatgggggaaaaa 38
             |||||||||||||||||||
Sbjct: 58268 aaaggaaatgggggaaaaa 58286
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>gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154728

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    aaaaaatgaaaggaaatgg 30
             |||||||||||||||||||
Sbjct: 89905 aaaaaatgaaaggaaatgg 89923
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>gb|AC114550.4| Homo sapiens chromosome 8, clone CTD-3023L14, complete sequence
          Length = 159903

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    aaaatgaaaggaaatgggg 32
             |||||||||||||||||||
Sbjct: 74661 aaaatgaaaggaaatgggg 74679
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>gb|AF403133.1|AF403132S2 Mus musculus G protein-gated K+ channel subunit 1 GIRK1 (Kcnj1) gene,
            exon 5 and partial cds
          Length = 7248

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aatatcaaatgatctgaca 75
            |||||||||||||||||||
Sbjct: 5496 aatatcaaatgatctgaca 5514
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>gb|AC023150.5| Homo sapiens BAC clone RP11-709L9 from 4, complete sequence
          Length = 188782

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 86     ctttggggaaaataaaaga 104
              |||||||||||||||||||
Sbjct: 175024 ctttggggaaaataaaaga 175042
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>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence, complete
             sequence
          Length = 120116

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    ttgcaatatcaaatgatct 71
             |||||||||||||||||||
Sbjct: 56145 ttgcaatatcaaatgatct 56163
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>dbj|AB168838.1| Macaca fascicularis testis cDNA, clone: QtsA-15204, similar to human
            KIAA1712 (KIAA1712), mRNA, RefSeq: NM_030633.1
          Length = 1769

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 11   caaaaaatgaaaggaaatg 29
            |||||||||||||||||||
Sbjct: 1091 caaaaaatgaaaggaaatg 1109
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>emb|BX324142.7| Zebrafish DNA sequence from clone CH211-196F19 in linkage group 20,
              complete sequence
          Length = 177066

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     aaaaaatgaaaggaaatgg 30
              |||||||||||||||||||
Sbjct: 117176 aaaaaatgaaaggaaatgg 117158
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>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence
          Length = 202346

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     aaaggaaatgggggaaaaa 38
              |||||||||||||||||||
Sbjct: 112212 aaaggaaatgggggaaaaa 112230
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>dbj|AK046778.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:B830004G02
            product:potassium inwardly-rectifying channel, subfamily
            J, member 3, full insert sequence
          Length = 4333

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aatatcaaatgatctgaca 75
            |||||||||||||||||||
Sbjct: 2874 aatatcaaatgatctgaca 2892
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 88       ttggggaaaataaaagaga 106
                |||||||||||||||||||
Sbjct: 17797581 ttggggaaaataaaagaga 17797599
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 53       ttgcaatatcaaatgatct 71
                |||||||||||||||||||
Sbjct: 23717119 ttgcaatatcaaatgatct 23717137
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>gb|AC110086.3| Homo sapiens BAC clone RP11-624F4 from 2, complete sequence
          Length = 106905

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    caactcacctttggggaaa 96
             |||||||||||||||||||
Sbjct: 34808 caactcacctttggggaaa 34790
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>gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, complete sequence
          Length = 157258

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 62     caaatgatctgacagtcaa 80
              |||||||||||||||||||
Sbjct: 150721 caaatgatctgacagtcaa 150739
to top
>gb|AC137579.3| Homo sapiens chromosome 8, clone RP11-346L1, complete sequence
          Length = 176794

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    gaaaggaaatgggggaaaa 37
             |||||||||||||||||||
Sbjct: 12150 gaaaggaaatgggggaaaa 12132
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>gb|AC124067.10| Homo sapiens chromosome 8, clone RP11-150O12, complete sequence
          Length = 179201

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    gaaaggaaatgggggaaaa 37
             |||||||||||||||||||
Sbjct: 61782 gaaaggaaatgggggaaaa 61800
to top
>gb|AC013262.7| Homo sapiens BAC clone RP11-89C12 from 2, complete sequence
          Length = 146559

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    gggaaaaatttcccatgta 49
             |||||||||||||||||||
Sbjct: 21726 gggaaaaatttcccatgta 21708
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 9       tccaaaaaatgaaaggaaa 27
               |||||||||||||||||||
Sbjct: 1772821 tccaaaaaatgaaaggaaa 1772803
to top
>emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 in linkage group 8,
              complete sequence
          Length = 175016

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaaaatgaaaggaaatgg 30
              |||||||||||||||||||
Sbjct: 151106 aaaaaatgaaaggaaatgg 151124
to top
>emb|AJ515535.1|AHI515535 Antirrhinum hispanicum slf-S1E gene for S locus F-box (SLF)-S1E protein
             and slf-S1 gene for S locus F-box (SLF)-S1 protein
          Length = 75183

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 14    aaaatgaaaggaaatgggggaaa 36
             |||||||||| ||||||||||||
Sbjct: 44574 aaaatgaaagaaaatgggggaaa 44552
to top
>emb|BX539310.9| Zebrafish DNA sequence from clone DKEY-19C16 in linkage group 20,
              complete sequence
          Length = 238530

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaaaatgaaaggaaatgg 30
              |||||||||||||||||||
Sbjct: 167270 aaaaaatgaaaggaaatgg 167288
to top
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1595_D08
          Length = 116351

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    ttggggaaaataaaagaga 106
             |||||||||||||||||||
Sbjct: 38225 ttggggaaaataaaagaga 38243
to top
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0676H02
          Length = 144252

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     ttggggaaaataaaagaga 106
              |||||||||||||||||||
Sbjct: 106215 ttggggaaaataaaagaga 106233
to top
>gb|AC005004.3|AC005004 Homo sapiens PAC clone RP3-403E2 from 22, complete sequence
          Length = 103606

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    aaaaaatgaaaggaaatgg 30
             |||||||||||||||||||
Sbjct: 85696 aaaaaatgaaaggaaatgg 85678
to top
>emb|Z73969.1|CEC12D8 Caenorhabditis elegans Cosmid C12D8, complete sequence
          Length = 36020

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 2    cttttgctccaaaaaatga 20
            |||||||||||||||||||
Sbjct: 2555 cttttgctccaaaaaatga 2537
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>gb|AC156581.4| Pan troglodytes BAC clone CH251-372H22 from chromosome unknown, complete
              sequence
          Length = 188418

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaaaatgaaaggaaatgg 30
              |||||||||||||||||||
Sbjct: 109476 aaaaaatgaaaggaaatgg 109494
to top
>gb|AC007066.4|AC007066 Homo sapiens chromosome 9, clone hRPK.355_O_1, complete sequence
          Length = 190815

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aaatgaaaggaaatggggg 33
             |||||||||||||||||||
Sbjct: 10917 aaatgaaaggaaatggggg 10899
to top
>dbj|AP006302.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-150O12, complete
              sequence
          Length = 179216

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     gaaaggaaatgggggaaaa 37
              |||||||||||||||||||
Sbjct: 117435 gaaaggaaatgggggaaaa 117417
to top
>emb|AL031620.1|CEC18B12 Caenorhabditis elegans Cosmid C18B12, complete sequence
          Length = 42234

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    aaaggaaatgggggaaaaa 38
             |||||||||||||||||||
Sbjct: 15365 aaaggaaatgggggaaaaa 15347
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>emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in linkage group 5,
             complete sequence
          Length = 253220

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    aaaaatgaaaggaaatggg 31
             |||||||||||||||||||
Sbjct: 67132 aaaaatgaaaggaaatggg 67114
to top
>emb|AL928583.10| Mouse DNA sequence from clone RP23-287C12 on chromosome 2, complete
             sequence
          Length = 118230

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aaaggaaatgggggaaaaa 38
             |||||||||||||||||||
Sbjct: 81753 aaaggaaatgggggaaaaa 81771
to top
>emb|AL929253.5| Mouse DNA sequence from clone RP23-350F14 on chromosome 2, complete
             sequence
          Length = 133910

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aatatcaaatgatctgaca 75
             |||||||||||||||||||
Sbjct: 76246 aatatcaaatgatctgaca 76264
to top
>emb|AL731558.14| Mouse DNA sequence from clone RP23-235D11 on chromosome 2, complete
             sequence
          Length = 222163

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aaatgaaaggaaatggggg 33
             |||||||||||||||||||
Sbjct: 35915 aaatgaaaggaaatggggg 35897
to top
>dbj|AP000068.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
            section 4/19
          Length = 100000

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   gaaaggaaatgggggaaaa 37
            |||||||||||||||||||
Sbjct: 2603 gaaaggaaatgggggaaaa 2621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,858,607
Number of Sequences: 3902068
Number of extensions: 1858607
Number of successful extensions: 141467
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141073
Number of HSP's gapped (non-prelim): 394
length of query: 106
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 85
effective length of database: 17,151,101,840
effective search space: 1457843656400
effective search space used: 1457843656400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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