>ref|XM_472398.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1035

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 116  ccgagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtgg 175
            ||||||||||||||||||||||||  ||||| ||| |||||||||| |||||||| ||||
Sbjct: 1013 ccgagcagcagcgacttgacgatggtatcggccatcccgtcggcgagcgggaacatgtgg 954

                                   
Query: 176  ccggccgtcgggagctcgtggta 198
            |||| | | ||||||||||||||
Sbjct: 953  ccggacttggggagctcgtggta 931

>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
             complete sequence
          Length = 143301

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 140/171 (81%)
 Strand = Plus / Minus

                                                                         
Query: 116   ccgagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtgg 175
             ||||||||||||||||||||||||   |||| ||| ||||||||||  ||||||| ||||
Sbjct: 92751 ccgagcagcagcgacttgacgatggtgtcggccatcccgtcggcgagagggaacatgtgg 92692

                                                                         
Query: 176   ccggccgtcgggagctcgtggtaaatcacccgggggagcctcttgctgaggtgccgcgac 235
             |||| | | |||||||||||||| |  |||| ||||||  ||| |||||||| ||  |||
Sbjct: 92691 ccggacttggggagctcgtggtagacgacccaggggagtttctcgctgaggtacctggac 92632

                                                                
Query: 236   agggcgacaggcacaaacaaatcctctaccccgtgccacagatgcaccttc 286
             |||  ||| ||||| | || ||||||  | ||||||||||| |||||||||
Sbjct: 92631 aggctgaccggcacgatcagatcctcggcgccgtgccacaggtgcaccttc 92581



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 116   ccgagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtgg 175
             ||||||||||||||||||||||||  ||||| ||| |||||||||| |||||||| ||||
Sbjct: 84337 ccgagcagcagcgacttgacgatggtatcggccatcccgtcggcgagcgggaacatgtgg 84278

                                    
Query: 176   ccggccgtcgggagctcgtggta 198
             |||| | | ||||||||||||||
Sbjct: 84277 ccggacttggggagctcgtggta 84255

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 140/171 (81%)
 Strand = Plus / Minus

                                                                            
Query: 116      ccgagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtgg 175
                ||||||||||||||||||||||||   |||| ||| ||||||||||  ||||||| ||||
Sbjct: 20362118 ccgagcagcagcgacttgacgatggtgtcggccatcccgtcggcgagagggaacatgtgg 20362059

                                                                            
Query: 176      ccggccgtcgggagctcgtggtaaatcacccgggggagcctcttgctgaggtgccgcgac 235
                |||| | | |||||||||||||| |  |||| ||||||  ||| |||||||| ||  |||
Sbjct: 20362058 ccggacttggggagctcgtggtagacgacccaggggagtttctcgctgaggtacctggac 20361999

                                                                   
Query: 236      agggcgacaggcacaaacaaatcctctaccccgtgccacagatgcaccttc 286
                |||  ||| ||||| | || ||||||  | ||||||||||| |||||||||
Sbjct: 20361998 aggctgaccggcacgatcagatcctcggcgccgtgccacaggtgcaccttc 20361948



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                            
Query: 116      ccgagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtgg 175
                ||||||||||||||||||||||||  ||||| ||| |||||||||| |||||||| ||||
Sbjct: 20353704 ccgagcagcagcgacttgacgatggtatcggccatcccgtcggcgagcgggaacatgtgg 20353645

                                       
Query: 176      ccggccgtcgggagctcgtggta 198
                |||| | | ||||||||||||||
Sbjct: 20353644 ccggacttggggagctcgtggta 20353622

>dbj|AK102032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081A11, full
            insert sequence
          Length = 1293

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 116  ccgagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtgg 175
            ||||||||||||||||||||||||  ||||| ||| |||||||||| |||||||| ||||
Sbjct: 1054 ccgagcagcagcgacttgacgatggtatcggccatcccgtcggcgagcgggaacatgtgg 995

                                   
Query: 176  ccggccgtcgggagctcgtggta 198
            |||| | | ||||||||||||||
Sbjct: 994  ccggacttggggagctcgtggta 972

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                            
Query: 118      gagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtggcc 177
                |||||||| |||| |||||||||  || ||||| || |||| ||  ||||||||||||||
Sbjct: 19614716 gagcagcatcgacctgacgatgaggtccggcatcccttcggtgatggggaacaggtggcc 19614657

                                     
Query: 178      ggccgtcgggagctcgtggta 198
                 ||||| || |||||||||||
Sbjct: 19614656 cgccgtgggcagctcgtggta 19614636

>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0605D08
          Length = 144340

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                         
Query: 118   gagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtggcc 177
             |||||||| |||| |||||||||  || ||||| || |||| ||  ||||||||||||||
Sbjct: 81002 gagcagcatcgacctgacgatgaggtccggcatcccttcggtgatggggaacaggtggcc 80943

                                  
Query: 178   ggccgtcgggagctcgtggta 198
              ||||| || |||||||||||
Sbjct: 80942 cgccgtgggcagctcgtggta 80922

>dbj|AK119210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E04, full
            insert sequence
          Length = 1405

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  gagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtggcc 177
            |||||||| |||| |||||||||  || ||||| || |||| ||  ||||||||||||||
Sbjct: 1221 gagcagcatcgacctgacgatgaggtccggcatcccttcggtgatggggaacaggtggcc 1162

                                 
Query: 178  ggccgtcgggagctcgtggta 198
             ||||| || |||||||||||
Sbjct: 1161 cgccgtgggcagctcgtggta 1141

>dbj|AK104452.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H03, full
            insert sequence
          Length = 1399

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  gagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtggcc 177
            |||||||| |||| |||||||||  || ||||| || |||| ||  ||||||||||||||
Sbjct: 1221 gagcagcatcgacctgacgatgaggtccggcatcccttcggtgatggggaacaggtggcc 1162

                                 
Query: 178  ggccgtcgggagctcgtggta 198
             ||||| || |||||||||||
Sbjct: 1161 cgccgtgggcagctcgtggta 1141

>dbj|AK099017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119A16, full
            insert sequence
          Length = 1391

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  gagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtggcc 177
            |||||||| |||| |||||||||  || ||||| || |||| ||  ||||||||||||||
Sbjct: 1222 gagcagcatcgacctgacgatgaggtccggcatcccttcggtgatggggaacaggtggcc 1163

                                 
Query: 178  ggccgtcgggagctcgtggta 198
             ||||| || |||||||||||
Sbjct: 1162 cgccgtgggcagctcgtggta 1142

>dbj|AK061527.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D10, full
            insert sequence
          Length = 1409

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  gagcagcagcgacttgacgatgacatcgggcattccgtcggcgaccgggaacaggtggcc 177
            |||||||| |||| |||||||||  || ||||| || |||| ||  ||||||||||||||
Sbjct: 1221 gagcagcatcgacctgacgatgaggtccggcatcccttcggtgatggggaacaggtggcc 1162

                                 
Query: 178  ggccgtcgggagctcgtggta 198
             ||||| || |||||||||||
Sbjct: 1161 cgccgtgggcagctcgtggta 1141

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 23     ttcaagggcaaggtgatgaatt 44
              ||||||||||||||||||||||
Sbjct: 127471 ttcaagggcaaggtgatgaatt 127492

>emb|CR792439.12| Zebrafish DNA sequence from clone DKEYP-100A1 in linkage group 8,
             complete sequence
          Length = 170028

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    gctcatctctcattctcgctc 85
             |||||||||||||||||||||
Sbjct: 55899 gctcatctctcattctcgctc 55919

>emb|CR388033.7| Zebrafish DNA sequence from clone CH211-187G4 in linkage group 15,
             complete sequence
          Length = 37045

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    cagctcatctctcattctcgc 83
             |||||||||||||||||||||
Sbjct: 32189 cagctcatctctcattctcgc 32169

>emb|BX927252.5| Zebrafish DNA sequence from clone CH211-212O10 in linkage group 5,
              complete sequence
          Length = 176261

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     gctcatctctcattctcgctc 85
              |||||||||||||||||||||
Sbjct: 127997 gctcatctctcattctcgctc 127977

>emb|AL928725.18| Zebrafish DNA sequence from clone CH211-13O20 in linkage group 23,
              complete sequence
          Length = 199910

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     gctcatctctcattctcgctc 85
              |||||||||||||||||||||
Sbjct: 103243 gctcatctctcattctcgctc 103223

>emb|BX950194.9| Zebrafish DNA sequence from clone CH211-218C6 in linkage group 18,
             complete sequence
          Length = 122061

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    gctcatctctcattctcgctc 85
             |||||||||||||||||||||
Sbjct: 47498 gctcatctctcattctcgctc 47518

>emb|CR524482.18| Zebrafish DNA sequence from clone DKEY-109F24 in linkage group 15,
              complete sequence
          Length = 125769

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     gctcatctctcattctcgctc 85
              |||||||||||||||||||||
Sbjct: 113192 gctcatctctcattctcgctc 113172

>gb|AE009312.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 82 of
            187 of the complete sequence
          Length = 11082

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 157  ggcgaccgggaacaggtggccggc 180
            ||||||||||| ||||||||||||
Sbjct: 5239 ggcgaccgggaccaggtggccggc 5216

>gb|AE008302.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 106 of
            187 of the complete sequence
          Length = 11111

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 157  ggcgaccgggaacaggtggccggc 180
            ||||||||||| ||||||||||||
Sbjct: 5873 ggcgaccgggaccaggtggccggc 5896

>emb|BX324113.14| Zebrafish DNA sequence from clone DKEYP-68B7 in linkage group 2, complete
              sequence
          Length = 188968

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     agctcatctctcattctcgc 83
              ||||||||||||||||||||
Sbjct: 182432 agctcatctctcattctcgc 182451

>emb|BX511147.12| Zebrafish DNA sequence from clone DKEYP-36E3 in linkage group 25,
              complete sequence
          Length = 150385

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     agctcatctctcattctcgc 83
              ||||||||||||||||||||
Sbjct: 142438 agctcatctctcattctcgc 142419

>emb|BX323598.9| Zebrafish DNA sequence from clone CH211-196M2 in linkage group 18,
              complete sequence
          Length = 197329

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     gctcatctctcattctcgct 84
              ||||||||||||||||||||
Sbjct: 168702 gctcatctctcattctcgct 168683

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     ctcgtctccgagcagcagcg 128
               ||||||||||||||||||||
Sbjct: 4256777 ctcgtctccgagcagcagcg 4256758

>emb|BX088695.9| Zebrafish DNA sequence from clone DKEY-18E5 in linkage group 25,
             complete sequence
          Length = 205870

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    agctcatctctcattctcgc 83
             ||||||||||||||||||||
Sbjct: 53375 agctcatctctcattctcgc 53394

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ccgggaacaggtggccggcc 181
              ||||||||||||||||||||
Sbjct: 693530 ccgggaacaggtggccggcc 693511


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,054,785
Number of Sequences: 3902068
Number of extensions: 2054785
Number of successful extensions: 52667
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52502
Number of HSP's gapped (non-prelim): 165
length of query: 296
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 274
effective length of database: 17,147,199,772
effective search space: 4698332737528
effective search space used: 4698332737528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)