>gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, complete sequence
          Length = 226006

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 2      aatctttttggagaaaggccaagc 25
              |||||||||||||||| |||||||
Sbjct: 161384 aatctttttggagaaatgccaagc 161407

>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      tggcagacaagtactttgcc 88
               ||||||||||||||||||||
Sbjct: 1258716 tggcagacaagtactttgcc 1258697

>gb|AF268611.1| Uncultured marine group II euryarchaeote EBAC37F11, BAC clone 37F11,
             partial sequence
          Length = 60006

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gcaaaaagaagtgcttcgtc 115
             ||||||||||||||||||||
Sbjct: 31683 gcaaaaagaagtgcttcgtc 31702

>emb|Y09424.1|NRCYP71A6 N.racemosa mRNA for cytochrome P450, CYP71A6, partial
          Length = 1697

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   aaattttgcaaaaagaagtg 108
            ||||||||||||||||||||
Sbjct: 1004 aaattttgcaaaaagaagtg 1023

>emb|BX247868.13| Zebrafish DNA sequence from clone DKEY-253A1 in linkage group 9, complete
              sequence
          Length = 258322

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     caaattttgcaaaaagaagt 107
              ||||||||||||||||||||
Sbjct: 233958 caaattttgcaaaaagaagt 233977

>gb|AC096967.18| Homo sapiens 3 BAC RP11-200A1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 123251

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    agtactttgccaaattttgc 97
             ||||||||||||||||||||
Sbjct: 35156 agtactttgccaaattttgc 35137

>dbj|AP005404.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-94H14, complete
             sequence
          Length = 142000

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    ctgtggacttctatgttttg 63
             ||||||||||||||||||||
Sbjct: 65300 ctgtggacttctatgttttg 65319

>gb|U00056.1| Caenorhabditis elegans cosmid R05H11, complete sequence
          Length = 32962

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 81    actttgccaaattttgcaaaaag 103
             ||||||| |||||||||||||||
Sbjct: 30982 actttgcaaaattttgcaaaaag 30960

>gb|AC166829.3| Mus musculus BAC clone RP23-299M19 from chromosome 1, complete sequence
          Length = 211292

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 121   ccaggccggctcccaccag 139
             |||||||||||||||||||
Sbjct: 74879 ccaggccggctcccaccag 74897

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 86       gccaaattttgcaaaaaga 104
                |||||||||||||||||||
Sbjct: 14579162 gccaaattttgcaaaaaga 14579180

>ref|XM_906533.2| PREDICTED: Mus musculus similar to ADP-ribosylation factor-like
            protein 4C (ADP-ribosylation factor-like 7) (LOC632433),
            mRNA
          Length = 4095

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 121  ccaggccggctcccaccag 139
            |||||||||||||||||||
Sbjct: 2712 ccaggccggctcccaccag 2694

>emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chromosome 16, complete
              sequence
          Length = 212227

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 50     acttctatgttttgcatat 68
              |||||||||||||||||||
Sbjct: 109020 acttctatgttttgcatat 109038

>gb|AC115303.6| Mus musculus BAC clone RP24-108I6 from chromosome 1, complete sequence
          Length = 192812

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 121    ccaggccggctcccaccag 139
              |||||||||||||||||||
Sbjct: 173248 ccaggccggctcccaccag 173266

>emb|AL133396.2| Human DNA sequence from clone RP5-1068H6 on chromosome 20p12.1-13
            Contains part of a ribosomal protein S4 pseudogene, the
            PRNP gene for prion protein (p27-30) (Creutzfeld-Jakob
            disease, Gerstmann-Strausler-Scheinker syndrome, fatal
            familial insomnia), the PRND gene for prion protein 2
            (dublet), a novel gene, an isopentenyl-diphosphate delta
            isomerase 1 (IDI1) pseudogene and two CpG islands,
            complete sequence
          Length = 148497

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 88   caaattttgcaaaaagaag 106
            |||||||||||||||||||
Sbjct: 9194 caaattttgcaaaaagaag 9212

>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete
             sequence
          Length = 147130

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    gccaaattttgcaaaaaga 104
             |||||||||||||||||||
Sbjct: 78549 gccaaattttgcaaaaaga 78531

>gb|AF306443.5| Homo sapiens chromosome 8 clone RP11-79H13 map 8p21-p11, complete
            sequence
          Length = 161850

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 93   tttgcaaaaagaagtgctt 111
            |||||||||||||||||||
Sbjct: 3656 tttgcaaaaagaagtgctt 3674

>gb|AC098612.3| Homo sapiens chromosome 8 clone RP11-409I21 map 8p21-p11, complete
             sequence
          Length = 147588

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 93    tttgcaaaaagaagtgctt 111
             |||||||||||||||||||
Sbjct: 59940 tttgcaaaaagaagtgctt 59958

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 108     gcttcgtcaatttccaggccggc 130
               ||||||||||||||| |||||||
Sbjct: 1677002 gcttcgtcaatttcccggccggc 1676980

>emb|AJ623276.1| Mus musculus ARL7 gene for ADP-ribosylation factor-like protein 7,
            exon 1, strain 129/SvJ
          Length = 9126

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 121  ccaggccggctcccaccag 139
            |||||||||||||||||||
Sbjct: 5697 ccaggccggctcccaccag 5679

>gb|AC102942.2| Homo sapiens chromosome 8, clone RP11-237O13, complete sequence
          Length = 101620

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    tttgcaaaaagaagtgctt 111
             |||||||||||||||||||
Sbjct: 99030 tttgcaaaaagaagtgctt 99012

>dbj|AK080743.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930033L07 product:ADP-RIBOSYLATION FACTOR-LIKE
            PROTEIN 7 (ADP-RIBOSYLATION FACTOR-LIKE PROTEIN LAK)
            homolog [Homo sapiens], full insert sequence
          Length = 3533

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 121  ccaggccggctcccaccag 139
            |||||||||||||||||||
Sbjct: 2540 ccaggccggctcccaccag 2522

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 86       gccaaattttgcaaaaaga 104
                |||||||||||||||||||
Sbjct: 14574137 gccaaattttgcaaaaaga 14574155

>gb|AC079031.39| Homo sapiens 12 BAC RP11-503G7 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 89059

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 125  gccggctcccaccagcgag 143
            |||||||||||||||||||
Sbjct: 7115 gccggctcccaccagcgag 7097

>gb|AC012593.8| Homo sapiens BAC clone RP11-511B24 from 2, complete sequence
          Length = 166074

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 73   agacaagtactttgccaaatttt 95
            ||||||||||||| |||||||||
Sbjct: 1541 agacaagtactttaccaaatttt 1563

>gb|AC104666.3| Homo sapiens BAC clone RP11-771N14 from 2, complete sequence
          Length = 23884

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 73    agacaagtactttgccaaatttt 95
             ||||||||||||| |||||||||
Sbjct: 23425 agacaagtactttaccaaatttt 23447

>gb|AC154775.2| Mus musculus BAC clone RP23-100F7 from chromosome 16, complete sequence
          Length = 192492

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 50     acttctatgttttgcatat 68
              |||||||||||||||||||
Sbjct: 176861 acttctatgttttgcatat 176879

>gb|AC066584.6|AC066584 Homo sapiens chromosome 3 clone RP11-244G3 map 3p, complete sequence
          Length = 155825

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     tgccaaattttgcaaaaag 103
              |||||||||||||||||||
Sbjct: 102689 tgccaaattttgcaaaaag 102707

>gb|AC018493.6|AC018493 Homo sapiens chromosome 3 clone RP11-163M22 map 3p, complete sequence
          Length = 180299

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     tgccaaattttgcaaaaag 103
              |||||||||||||||||||
Sbjct: 145236 tgccaaattttgcaaaaag 145218

>ref|XM_341020.2| PREDICTED: Rattus norvegicus protein kinase, DNA activated, catalytic
            polypeptide (predicted) (Prkdc_predicted), mRNA
          Length = 12561

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   ctttgccaaattttgcaaa 100
            |||||||||||||||||||
Sbjct: 2164 ctttgccaaattttgcaaa 2146

>gb|AC011327.17|AC011327 Homo sapiens 3 BAC RP11-77I5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168812

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     tgccaaattttgcaaaaag 103
              |||||||||||||||||||
Sbjct: 133742 tgccaaattttgcaaaaag 133724

>gb|AF119834.1|AF119834 Sinorhizobium meliloti alpha-galactosidase (melA) and periplasmic
            alpha-galactoside binding protein (agpA) genes, complete
            cds
          Length = 4100

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 108  gcttcgtcaatttccaggccggc 130
            ||||||||||||||| |||||||
Sbjct: 3398 gcttcgtcaatttcccggccggc 3420

>ref|NM_177305.2| Mus musculus ADP-ribosylation factor-like 4C (Arl4c), mRNA
          Length = 3533

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 121  ccaggccggctcccaccag 139
            |||||||||||||||||||
Sbjct: 2540 ccaggccggctcccaccag 2522

>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794
          Length = 474727

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     aaattttgcaaaaagaagt 107
              |||||||||||||||||||
Sbjct: 331939 aaattttgcaaaaagaagt 331921

>gb|AC147597.2| Gallus gallus BAC clone CH261-100D18 from chromosome unknown, complete
             sequence
          Length = 168372

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    attttgcaaaaagaagtgc 109
             |||||||||||||||||||
Sbjct: 44757 attttgcaaaaagaagtgc 44739

>emb|AJ246530.1|PAT246530 Pimelia atlantis frigioides satellite DNA, clone pAFR4
          Length = 358

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 86  gccaaattttgcaaaaaga 104
           |||||||||||||||||||
Sbjct: 19  gccaaattttgcaaaaaga 37

>gb|AC023485.6| Homo sapiens chromosome 3 clone RP11-489D19 map 3p, complete sequence
          Length = 179304

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     tgccaaattttgcaaaaag 103
              |||||||||||||||||||
Sbjct: 126162 tgccaaattttgcaaaaag 126180


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,475,586
Number of Sequences: 3902068
Number of extensions: 1475586
Number of successful extensions: 106123
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105922
Number of HSP's gapped (non-prelim): 201
length of query: 143
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 122
effective length of database: 17,151,101,840
effective search space: 2092434424480
effective search space used: 2092434424480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)