| Clone Name | rbast15g03 |
|---|---|
| Clone Library Name | barley_pub |
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 110 bits (276), Expect = 7e-25 Identities = 53/58 (91%), Positives = 55/58 (94%) Frame = -1 Query: 271 AHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 AHGMFAADVRRAEETI+ NAD GR+NRCGAGVLPYELLAPSSPPGVTCRGVPNSISI Sbjct: 861 AHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 95.9 bits (237), Expect = 2e-20 Identities = 44/54 (81%), Positives = 49/54 (90%) Frame = -1 Query: 259 FAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 FAADVRRAEE I+ NADP RRNRCGAGVLPYEL+APSS PG+TCRGVPNS++I Sbjct: 846 FAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 68.6 bits (166), Expect = 4e-12 Identities = 32/54 (59%), Positives = 40/54 (74%) Frame = -1 Query: 259 FAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 F+ ++ AE TI N +P +NRCGAG++PYELL P S PGVT RG+PNSISI Sbjct: 843 FSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 61.6 bits (148), Expect = 5e-10 Identities = 30/58 (51%), Positives = 38/58 (65%) Frame = -1 Query: 271 AHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 A+ FAA ++ E I G N D +NRCGAG+LPY+L+ P S GVT G+PNS SI Sbjct: 867 AYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 60.5 bits (145), Expect = 1e-09 Identities = 29/58 (50%), Positives = 37/58 (63%) Frame = -1 Query: 271 AHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 A+ F A ++ E I G N D +NRCGAG+LPY+L+ P S GVT G+PNS SI Sbjct: 884 AYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 54.7 bits (130), Expect = 6e-08 Identities = 28/59 (47%), Positives = 34/59 (57%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 +A F + EE + N D RNR G +PY LL PSS G+TCRG+PNSISI Sbjct: 808 EAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI 866
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 52.8 bits (125), Expect = 2e-07 Identities = 27/59 (45%), Positives = 34/59 (57%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 +A F + + E + N D RNRCG +PY LL PSS G+T RG+PNSISI Sbjct: 799 EAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 50.8 bits (120), Expect = 9e-07 Identities = 27/59 (45%), Positives = 34/59 (57%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 +A F V+ E+ I N D +NR G +PY LL PSS GVT RG+PNS+SI Sbjct: 801 EAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 50.4 bits (119), Expect = 1e-06 Identities = 27/59 (45%), Positives = 34/59 (57%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 +A F + + E I N+DP RNR G LPY LL SS G+T +G+PNSISI Sbjct: 806 EAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 50.1 bits (118), Expect = 1e-06 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRR-NRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 QA F ++ EE + N DP + NR G LPY LL PSS G+T RG+PNSISI Sbjct: 780 QAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 50.1 bits (118), Expect = 1e-06 Identities = 28/59 (47%), Positives = 34/59 (57%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 QA F ++ EE + N D NR G LPY LL P+S G+TCRG+PNSISI Sbjct: 808 QAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNS-EGLTCRGIPNSISI 865
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/59 (45%), Positives = 32/59 (54%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 QA F + E + N DP +R G LPY LL PSS G+T RG+PNSISI Sbjct: 806 QAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKEGLTFRGIPNSISI 864
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 49.3 bits (116), Expect = 3e-06 Identities = 26/59 (44%), Positives = 33/59 (55%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 +A F + E+ + N D RNR G +PY LL PSS G+T RG+PNSISI Sbjct: 795 EAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPS-SPPGVTCRGVPNSISI 98 QA F ++ EE I G N D RNR G +PY +L P+ G+T RG+PNSISI Sbjct: 803 QAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDEGLTFRGIPNSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 47.4 bits (111), Expect = 1e-05 Identities = 26/59 (44%), Positives = 33/59 (55%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 +A F + E+ + N D RNR G +PY LL PSS G+T RG+PNSISI Sbjct: 803 EAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKEGLTFRGIPNSISI 861
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/54 (48%), Positives = 32/54 (59%) Frame = -1 Query: 259 FAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 F ++ E I N + +NR GAGV+ YELL P+S GVT GVP SISI Sbjct: 843 FKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 44.7 bits (104), Expect = 6e-05 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSS------PPGVTCRGVP 113 +A F A + E + N DP R+NR G PY LL P++ G++ RG+P Sbjct: 806 EAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865 Query: 112 NSISI 98 NSISI Sbjct: 866 NSISI 870
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 44.7 bits (104), Expect = 6e-05 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCR-----GVPN 110 +A +F +R E ++ N D RRNR GAGV+PY LL P + + + G+PN Sbjct: 869 KAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPN 928 Query: 109 SISI 98 SISI Sbjct: 929 SISI 932
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 44.3 bits (103), Expect = 8e-05 Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 10/69 (14%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPS----------SPPGVTC 125 QA F R+ E + N DP R+NR GAG++PY LL PS V Sbjct: 868 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVME 927 Query: 124 RGVPNSISI 98 G+PNSISI Sbjct: 928 MGIPNSISI 936
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPS------SPPGVTCRGVP 113 +A F+ + E + G N D G +NR G PY LL P+ + G+T +G+P Sbjct: 802 EAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861 Query: 112 NSISI 98 NSISI Sbjct: 862 NSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 42.0 bits (97), Expect = 4e-04 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPS------SPPGVTCRGVP 113 +A F+ + E + N DP +NR G PY L+ P+ + G+T RG+P Sbjct: 799 EAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIP 858 Query: 112 NSISI 98 NSISI Sbjct: 859 NSISI 863
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 40.8 bits (94), Expect = 0.001 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Frame = -1 Query: 235 EETIKGGNADPGRRNRCGAGVLPYELLAPS------SPPGVTCRGVPNSISI 98 E + G N DP +NR G PY LL P+ + G+T +G+PNSISI Sbjct: 811 ESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/39 (46%), Positives = 26/39 (66%) Frame = -1 Query: 214 NADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 N+ +NR G +PY LL P+S G+T +G+PNS+SI Sbjct: 821 NSHKSWKNRSGPVNVPYTLLFPTSEEGLTGKGIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/58 (39%), Positives = 30/58 (51%) Frame = -1 Query: 271 AHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 A F + E+ I N D NR G PY LL P+S G+T +G+PNS+SI Sbjct: 804 AFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 861
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 38.1 bits (87), Expect = 0.006 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = -1 Query: 274 QAHGMFAADVRRAEETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGV 116 +A F + E+ + N D RNR G +PY LL PSS G+T RG+ Sbjct: 689 EAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSEEGLTFRGI 741
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 37.7 bits (86), Expect = 0.008 Identities = 20/46 (43%), Positives = 27/46 (58%) Frame = -1 Query: 235 EETIKGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 98 E+ I N + NR G PY LL P+S G+T +G+PNS+SI Sbjct: 815 EKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 860
>CK002_HUMAN (Q9UID3) Protein C11orf2 (Another new gene 2 protein)| Length = 782 Score = 36.2 bits (82), Expect = 0.022 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 Query: 35 GESPEVLNKIHSESRAYNGVSYGDAVGHPAAGDP 136 GE+PE K H + Y G+S G+A G PA DP Sbjct: 24 GEAPERRRKAHGMLKLYYGLSEGEAAGRPAGPDP 57
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 35.8 bits (81), Expect = 0.029 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%) Frame = -1 Query: 235 EETIKGGNADPGRRNRCGAGVLPYELLAPSSP-------PGVTCRGVPNSISI 98 E IK N + +NR G +PY LL P++ G+T G+PNSISI Sbjct: 825 ENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>POLS_IPNVJ (P05844) Structural polyprotein (PP) [Contains: Capsid protein VP2;| p1; p2; p3; Protease VP4 (EC 3.4.21.-) (Nonstructural protein VP4) (NS); Capsid assembly protein VP3] Length = 972 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = -1 Query: 247 VRRAEETIKGGNADPGRRNRCGAGVLP--YELLAPSSP-PGVTCRGVPNSI 104 VR +ET +G + G R RC A + P YE+ PS P V G P +I Sbjct: 175 VRLEDETPQGPQSMNGARMRCTAAIAPRRYEIDLPSERLPTVAATGTPTTI 225
>YES_AVISY (P00527) Tyrosine-protein kinase transforming protein YES (EC| 2.7.10.2) (Fragment) Length = 528 Score = 29.6 bits (65), Expect = 2.1 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +3 Query: 57 TKSTANRGHTMAYHMEML--LGTPRQVTPGGELGASSSYGSTPAPHRFRLPG 206 T+S A +G + ++ + G P +TP G GASSS+ + P+P+ L G Sbjct: 32 TQSPAIKGSAVNFNSHSMTPFGGPSGMTPFG--GASSSFSAVPSPYPSTLTG 81
>P66A_MOUSE (Q8CHY6) Transcriptional repressor p66 alpha (GATA zinc finger| domain-containing protein 2A) Length = 629 Score = 29.6 bits (65), Expect = 2.1 Identities = 24/71 (33%), Positives = 35/71 (49%) Frame = +3 Query: 60 KSTANRGHTMAYHMEMLLGTPRQVTPGGELGASSSYGSTPAPHRFRLPGSALPPLMVSSA 239 K TA+ G T+ ++ GT Q P G+ +S ST R+PGS +PP +V Sbjct: 174 KPTASSGSTVTTPPPLVRGT--QNIPAGKTSLQTS--ST------RIPGSIIPPPLVRGG 223 Query: 240 RRTSAANMPCA 272 ++ SA P A Sbjct: 224 QQVSAKLGPQA 234
>YES_CHICK (P09324) Tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes)| Length = 540 Score = 29.6 bits (65), Expect = 2.1 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +3 Query: 57 TKSTANRGHTMAYHMEML--LGTPRQVTPGGELGASSSYGSTPAPHRFRLPG 206 T+S A +G + ++ + G P +TP G GASSS+ + P+P+ L G Sbjct: 39 TQSPAIKGSAVNFNSHSMTPFGGPSGMTPFG--GASSSFSAVPSPYPSTLTG 88
>KIFC2_MOUSE (O08672) Kinesin-like protein KIFC2| Length = 792 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -2 Query: 150 PARRRGSPAAGCPTASPYDTPL 85 PARRR +P +G P++ DTPL Sbjct: 736 PARRRRAPRSGTPSSLSTDTPL 757
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 28.5 bits (62), Expect = 4.7 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +3 Query: 117 TPRQVTPGGELGASSSYGSTPAPHRFRLPGSALPPLMVSSARRTSAAN 260 TP +TP G GA S S+P PGS PP S + +SA + Sbjct: 149 TPGSMTPPG--GAHSPKSSSPVSPTTSPPGSTTPPGGAHSPKSSSAVS 194
>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene| homolog) Length = 1111 Score = 28.1 bits (61), Expect = 6.1 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Frame = +3 Query: 36 GNPLKS*TKSTANRGHTMAYHMEMLLGTPRQVTPGG--ELGASSSYGSTPAPH---RFRL 200 G P+ +S+++ + AY + PG E GASS G TPA H R R Sbjct: 536 GPPVSLDRRSSSSSSMSSAYTVSRRSSLASPFPPGTPPENGASSLPGLTPAQHYMLRARY 595 Query: 201 P---GSALPPLMVSSARRTSAANMP 266 GS PP S R ++P Sbjct: 596 ASARGSGTPPTAAHSLDRMGGLSVP 620
>PEL17_ARATH (O65457) Putative pectate lyase 17 precursor (EC 4.2.2.2)| Length = 394 Score = 27.7 bits (60), Expect = 8.0 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Frame = +3 Query: 117 TPRQVTPGGELGASSSYGSTPAPH----RFRL-PGSALPPLMVSSARRTSAANMPC 269 T V G S YGS P P+ RF + PG+ +P L + N PC Sbjct: 338 TSNDVFKNGAFFVPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393
>IF2_PROMP (Q7UZZ9) Translation initiation factor IF-2| Length = 1169 Score = 27.7 bits (60), Expect = 8.0 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 223 KGGNADPGRRNRCGAGVLPYELLAPSSPPGVTCRGVPN 110 +G PG NR G PY AP+ P G +GVPN Sbjct: 342 QGSPNRPGTPNRPGT---PYRQGAPNRPGGQNRQGVPN 376 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,047,662 Number of Sequences: 219361 Number of extensions: 940042 Number of successful extensions: 3482 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3092 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3472 length of database: 80,573,946 effective HSP length: 66 effective length of database: 66,096,120 effective search space used: 1586306880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)