>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for
            sucrose-sucrose-1-fructosyltransferase (1-sst gene)
          Length = 2157

 Score =  208 bits (105), Expect = 6e-51
 Identities = 144/157 (91%)
 Strand = Plus / Minus

                                                                        
Query: 84   ttaattactaaatcaaactccagagaaggaaaaacaaaattggactgatcggcaaagccc 143
            |||||||||||||||||||| |||||||||| ||||||| ||||||||| |||| || | 
Sbjct: 2058 ttaattactaaatcaaactcaagagaaggaagaacaaaaatggactgataggcagagtcg 1999

                                                                        
Query: 144  atagtactccattacatgtgtctaggaaaaagggagccaccgaccaaccaatcaatccac 203
            |||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||
Sbjct: 1998 atagtactccatcacatgtgtctaggagaaagggagccaccgaccgagcaatcaatccac 1939

                                                 
Query: 204  aactttttgtaagcgatcagcctaaccgacgactacc 240
            ||||| ||||| |||||||||||||||||||||||||
Sbjct: 1938 aacttcttgtacgcgatcagcctaaccgacgactacc 1902



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                            
Query: 1    attcccaacaaattgatttacaagtgaacaat 32
            ||||||||||||||||||||||||||||||||
Sbjct: 2141 attcccaacaaattgatttacaagtgaacaat 2110

>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose
            1-fructosytransferase, complete cds
          Length = 2330

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 4    cccaacaaattgatttacaagtgaacaat 32
            ||||||||||||||||||| |||||||||
Sbjct: 2266 cccaacaaattgatttacatgtgaacaat 2238



 Score = 46.1 bits (23), Expect = 0.050
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 198  atccacaactttttgtaagcgatcagcctaaccgacgactacc 240
            ||||| ||||| ||||||| |||||| |||| |||||||||||
Sbjct: 2071 atccataacttgttgtaagtgatcagtctaatcgacgactacc 2029

>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 95      atcaaactccagagaaggaaaaa 117
               |||||||||||||||||||||||
Sbjct: 1316863 atcaaactccagagaaggaaaaa 1316841

>gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence
          Length = 172144

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 95    atcaaactccagagaaggaaaaa 117
             |||||||||||||||||||||||
Sbjct: 17567 atcaaactccagagaaggaaaaa 17545

>emb|CR388137.8| Zebrafish DNA sequence from clone DKEY-17M13 in linkage group 5,
             complete sequence
          Length = 181599

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 180   ccaccgaccaaccaatcaatcca 202
             |||||||||||||||||||||||
Sbjct: 49113 ccaccgaccaaccaatcaatcca 49135

>gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 map human ortholog
             17q21.33, complete sequence
          Length = 162327

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    tcaaactccagagaaggaaaa 116
             |||||||||||||||||||||
Sbjct: 62536 tcaaactccagagaaggaaaa 62556

>gb|AY280869.1| Brassica napus polygalacturonase (Sta44G2) gene, complete cds
          Length = 2914

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 107  agaaggaaaaacaaaattgga 127
            |||||||||||||||||||||
Sbjct: 2418 agaaggaaaaacaaaattgga 2398

>gb|AF518563.1| Brassica oleracea putative pollen polygalacturonase (PG1) mRNA,
            complete cds
          Length = 1435

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 107  agaaggaaaaacaaaattgga 127
            |||||||||||||||||||||
Sbjct: 1280 agaaggaaaaacaaaattgga 1260

>gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, complete sequence
          Length = 175262

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    tcaaactccagagaaggaaaa 116
             |||||||||||||||||||||
Sbjct: 75323 tcaaactccagagaaggaaaa 75303

>gb|AC004590.1|AC004590 Homo sapiens chromosome 17, clone hCIT.22_K_21, complete sequence
          Length = 135259

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tcaaactccagagaaggaaaa 116
           |||||||||||||||||||||
Sbjct: 823 tcaaactccagagaaggaaaa 843

>gb|AC109294.8| Mus musculus chromosome 1, clone RP24-236C22, complete sequence
          Length = 151772

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     aaatcaaactccagagaaggaaaa 116
              |||||||| |||||||||||||||
Sbjct: 134551 aaatcaaaatccagagaaggaaaa 134528

>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete
            sequence
          Length = 221754

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 188  caaccaatcaatccacaacttttt 211
            |||||||||||| |||||||||||
Sbjct: 4304 caaccaatcaattcacaacttttt 4281

>ref|XM_752729.1| Ustilago maydis 521 hypothetical protein (UM01675.1) partial mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  gggagccaccgaccaaccaa 194
            ||||||||||||||||||||
Sbjct: 1444 gggagccaccgaccaaccaa 1425

>gb|AC131804.4| Mus musculus BAC clone RP24-553C6 from chromosome 1, complete sequence
          Length = 138699

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 93    aaatcaaactccagagaaggaaaa 116
             |||||||| |||||||||||||||
Sbjct: 46540 aaatcaaaatccagagaaggaaaa 46517

>gb|AC125403.4| Mus musculus BAC clone RP23-4E15 from 1, complete sequence
          Length = 126790

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 188   caaccaatcaatccacaacttttt 211
             |||||||||||| |||||||||||
Sbjct: 97098 caaccaatcaattcacaacttttt 97075

>emb|AL662886.6| Human DNA sequence from clone RP13-339K12 on chromosome X Contains a
             pseudogene similar to part of p30 (nuclear protein p30)
             and a CpG island, complete sequence
          Length = 63451

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gagaaggaaaaacaaaattg 125
             ||||||||||||||||||||
Sbjct: 60315 gagaaggaaaaacaaaattg 60334

>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ccagagaaggaaaaacaaaa 122
             ||||||||||||||||||||
Sbjct: 98073 ccagagaaggaaaaacaaaa 98092

>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project)
          Length = 95679

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ccagagaaggaaaaacaaaa 122
             ||||||||||||||||||||
Sbjct: 37363 ccagagaaggaaaaacaaaa 37382

>gb|AC025271.7|AC025271 Homo sapiens chromosome 15 clone CTD-2515H24 map 15q21.3, complete
             sequence
          Length = 191330

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 102   tccagagaaggaaaaacaaaattggact 129
             |||| |||||||||||| ||||||||||
Sbjct: 47650 tccatagaaggaaaaactaaattggact 47623

>gb|AC012186.8| Homo sapiens chromosome 16 clone RP11-93O14, complete sequence
          Length = 161523

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 99     aactccagagaaggaaaaacaaaa 122
              ||||||||||||||||||| ||||
Sbjct: 157161 aactccagagaaggaaaaataaaa 157138

>gb|AC007225.2|AC007225 Homo sapiens chromosome 16 clone RPCI-11_480G7, complete sequence
          Length = 218892

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     aactccagagaaggaaaaacaaaa 122
              ||||||||||||||||||| ||||
Sbjct: 205295 aactccagagaaggaaaaataaaa 205318

>emb|AL772241.27| Zebrafish DNA sequence from clone CH211-194M7 in linkage group 25,
              complete sequence
          Length = 154972

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    tccagagaaggaaaaacaaa 121
              ||||||||||||||||||||
Sbjct: 123879 tccagagaaggaaaaacaaa 123860

>gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, complete sequence
          Length = 158206

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 188   caaccaatcaatccacaacttttt 211
             |||||||||||| |||||||||||
Sbjct: 80024 caaccaatcaattcacaacttttt 80001

>gb|AC140789.2| Gallus gallus BAC clone TAM31-90N23 from chromosome ul, complete
            sequence
          Length = 92928

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 96   tcaaactccagagaaggaaa 115
            ||||||||||||||||||||
Sbjct: 9948 tcaaactccagagaaggaaa 9929

>emb|CT025670.8| Mouse DNA sequence from clone RP24-384G18 on chromosome 17, complete
             sequence
          Length = 199300

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aaggaaaaacaaaattggac 128
             ||||||||||||||||||||
Sbjct: 67607 aaggaaaaacaaaattggac 67626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,223,322
Number of Sequences: 3902068
Number of extensions: 2223322
Number of successful extensions: 48387
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48350
Number of HSP's gapped (non-prelim): 37
length of query: 240
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 218
effective length of database: 17,147,199,772
effective search space: 3738089550296
effective search space used: 3738089550296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)