ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast15f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB223039.1| Triticum aestivum TaMDC1 mRNA for multidomain cy... 563 e-157
2gb|BT009401.1| Triticum aestivum clone wlm96.pk045.d23:fis, full... 511 e-142
3dbj|AK119511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
4dbj|AK104155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
5dbj|AK073275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
6ref|NM_188046.1| Oryza sativa (japonica cultivar-group), Ozsa846... 125 1e-25
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
8dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9tpe|BN000509.1| TPA: TPA_exp: Zea mays mRNA for putative cystati... 78 2e-11
10emb|AM055633.1| Zea mays mRNA for partial putative cystatin (cc4... 78 2e-11
11emb|AL845270.6| Mouse DNA sequence from clone RP23-186C16 on chr... 50 0.005
12dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone... 48 0.020
13gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, com... 46 0.078
14gb|AF410861.1| Woodchuck hepatitis B virus isolate 342 polymeras... 44 0.31
15gb|AF410860.1| Woodchuck hepatitis B virus isolate 335 clone b p... 44 0.31
16gb|AF410859.1| Woodchuck hepatitis B virus isolate 335 polymeras... 44 0.31
17gb|AF410858.1| Woodchuck hepatitis B virus isolate 342 defective... 44 0.31
18gb|AF410857.1| Woodchuck hepatitis B virus isolate 335 type I mu... 44 0.31
19gb|AF410856.1| Woodchuck hepatitis B virus isolate 331 type IV m... 44 0.31
20gb|AF410855.1| Woodchuck hepatitis B virus isolate 331 type II m... 44 0.31
21emb|AL138778.13| Human DNA sequence from clone RP11-57K16 on chr... 44 0.31
22dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
23dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
24dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
25gb|M15954.1|OHVSAGA Woodchuck hepatitis virus mRNA encoding surf... 44 0.31
26gb|M18752.1|OHVCGD Woodchuck hepatitis virus (WHV), complete gen... 44 0.31
27gb|M19183.1|OHVCGC Woodchuck hepatitis virus (WHV), complete gen... 44 0.31
28gb|M60766.1|MARB7 Woodchuck hepatitis virus surface antigen (pre... 44 0.31
29gb|AY468486.1| Lentiviral transfer vector pHsCXW, complete sequence 42 1.2
30dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 42 1.2
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
32gb|AC159106.2| Mus musculus chromosome 14 clone RP23-244I11, com... 42 1.2
33gb|J04514.1|OHVHEPBA Woodchuck hepatitis B virus (WHV8), complet... 42 1.2
34gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 42 1.2
35gb|M11082.1|OHVCGB Woodchuck hepatitis virus 2, complete genome 42 1.2
36gb|AC151753.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 4.8
37gb|AC103388.6| Mus musculus chromosome 7, clone RP24-403B15, com... 40 4.8
38gb|L03425.1|BACBDGALB Bacillus circulans beta-D-galactosidase (b... 40 4.8
39ref|XM_873520.1| PREDICTED: Bos taurus similar to Wilms tumour 1... 40 4.8
40ref|XM_612242.2| PREDICTED: Bos taurus similar to Wilms tumour 1... 40 4.8
41ref|XM_873116.1| PREDICTED: Bos taurus similar to Wilms tumour 1... 40 4.8
42ref|XM_873010.1| PREDICTED: Bos taurus similar to Wilms tumour 1... 40 4.8
43emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chro... 40 4.8
44gb|BC112754.1| Bos taurus similar to Wilms tumour 1-associating ... 40 4.8
45emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on ch... 40 4.8
46emb|AL158050.8| Human DNA sequence from clone RP3-437C15 on chro... 40 4.8
47emb|AL135914.25| Human DNA sequence from clone RP1-56L9 on chrom... 40 4.8
48emb|AL121834.20|HSJ509I19 Human DNA sequence from clone RP3-509I... 40 4.8
49emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M... 40 4.8
50dbj|D14661.1|HUMORF05 Homo sapiens KIAA0105 mRNA, complete cds 40 4.8
51emb|CR622276.1| full-length cDNA clone CS0DI060YM16 of Placenta ... 40 4.8
52emb|CR607182.1| full-length cDNA clone CS0DI085YO18 of Placenta ... 40 4.8
53emb|CR605059.1| full-length cDNA clone CS0DE010YD16 of Placenta ... 40 4.8
54emb|CR606450.1| full-length cDNA clone CS0DN001YM02 of Adult bra... 40 4.8
55emb|CR602734.1| full-length cDNA clone CS0DG004YF21 of B cells (... 40 4.8
56emb|CR602556.1| full-length cDNA clone CS0DH002YO11 of T cells (... 40 4.8
57emb|CR595437.1| full-length cDNA clone CS0DF021YA16 of Fetal bra... 40 4.8
58emb|BX537293.9| Zebrafish DNA sequence from clone DKEYP-40D11 in... 40 4.8
59gb|AC098804.6| Homo sapiens chromosome 16 clone RP11-244P19, com... 40 4.8
60gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet... 40 4.8
61gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complet... 40 4.8
62ref|NM_152857.1| Homo sapiens Wilms tumor 1 associated protein (... 40 4.8
63ref|NM_152858.1| Homo sapiens Wilms tumor 1 associated protein (... 40 4.8
64gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.8
65emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chr... 40 4.8 
>dbj|AB223039.1| Triticum aestivum TaMDC1 mRNA for multidomain cystatin, complete
           cds
          Length = 1031

 Score =  563 bits (284), Expect = e-157
 Identities = 341/360 (94%)
 Strand = Plus / Minus

                                                                       
Query: 1   agttacgagattggttacacattccaccattaacaccaaccaagtaatgttcagctagta 60
           |||||| ||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 975 agttacaagattggttgcacattccaccattaacagcaaccaaataaggttcagctagta 916

                                                                       
Query: 61  agaaacagagttccatcgtgccgcattcaacaaccaagccggtgcagaaagcataatatg 120
           ||||||| ||||||||||||   ||||||||||||||||||||||| |||||||||||| 
Sbjct: 915 agaaacatagttccatcgtgattcattcaacaaccaagccggtgcaaaaagcataatatc 856

                                                                       
Query: 121 caggtagagacaggtttactgtttatttcttaatacaaactacattactgtgagcttaac 180
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 855 caggtagagacaggtttactgtttatttcttagtacaaactacattactgtgagctcaac 796

                                                                       
Query: 181 aagtcagattcactggctgctagattcgtcatgctccggctgcatctggttcagcacaaa 240
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 795 aagtcagattcactggctgctagattcgtcatgctctggctgcatctggttcagcacaaa 736

                                                                       
Query: 241 agctccctcaaggttcttatgcacctcggctttcattttctcctcctttgtccctctctt 300
           ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 735 agctccctcgaggttcttatgcacctcggctttcattttctcctccttggtccctctctt 676

                                                                       
Query: 301 cagtttcatgacgatatcaaatttggcgaagtcttcaacaacctcagcctttgcgcgaac 360
           ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 675 cagtttcatgaggatatcaaacttggcgaagtcttcaaccacctcagcctttgcgcgaac 616
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>gb|BT009401.1| Triticum aestivum clone wlm96.pk045.d23:fis, full insert mRNA
            sequence
          Length = 1149

 Score =  511 bits (258), Expect = e-142
 Identities = 337/361 (93%), Gaps = 3/361 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    agttacgagattggttacacattccaccattaacaccaaccaagtaatgttcagctagta 60
            |||||| ||||||||| |||||||||||||||||| ||||||| ||| |||||||||| |
Sbjct: 1059 agttacaagattggttgcacattccaccattaacagcaaccaaataaggttcagctagca 1000

                                                                        
Query: 61   agaa-acagagttccatcgtgccgcattcaacaaccaagccggtgcagaaagcataatat 119
            |||| ||| |||||||||||||  ||||||||||||  ||||||||||||||||||||||
Sbjct: 999  agaacacatagttccatcgtgcttcattcaacaacc--gccggtgcagaaagcataatat 942

                                                                        
Query: 120  gcaggtagagacaggtttactgtttatttcttaatacaaactacattactgtgagcttaa 179
             || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 941  ccatgtagagacaggtttactgtttatttcttagtacaaactacattactgtgagctcaa 882

                                                                        
Query: 180  caagtcagattcactggctgctagattcgtcatgctccggctgcatctggttcagcacaa 239
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 881  caagtcagattcactggctgctagattcgtcatgctctggctgcatctggttcagcacaa 822

                                                                        
Query: 240  aagctccctcaaggttcttatgcacctcggctttcattttctcctcctttgtccctctct 299
            |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 821  aagctccctcgaggttcttatgcacctcggctttcattttctcctccttggtccctctct 762

                                                                        
Query: 300  tcagtttcatgacgatatcaaatttggcgaagtcttcaacaacctcagcctttgcgcgaa 359
            |||||||||||| ||||||||| || |||||||||||||| |||||||||||||| ||||
Sbjct: 761  tcagtttcatgaggatatcaaacttcgcgaagtcttcaaccacctcagcctttgcacgaa 702

             
Query: 360  c 360
            |
Sbjct: 701  c 701
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>dbj|AK119511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C04, full
           insert sequence
          Length = 1095

 Score =  127 bits (64), Expect = 3e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 189 ttcactggctgctagattcgtcatgctccggctgcatctggttcagcacaaaagctccct 248
           ||||||||||||| ||||| ||||||||  | |||||||||||||| ||||| || || |
Sbjct: 852 ttcactggctgctcgattcatcatgctcttgttgcatctggttcagtacaaatgcccctt 793

                                                                       
Query: 249 caaggttcttatgcacctcggctttcattttctcctcctttgtccctctcttcagtttca 308
           |||||||||| || ||||||||||| |  |||||||||||  | || ||||| |||||||
Sbjct: 792 caaggttcttgtggacctcggctttgaacttctcctccttgtttcccctcttaagtttca 733

                                                               
Query: 309 tgacgatatcaaatttggcgaagtcttcaacaacctcagcctttgcgcgaac 360
           | |  || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 732 tcaaaatgtcaaactttgcgaagtcttcaacaacctctgcctttgcacgaac 681
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>dbj|AK104155.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B08, full
           insert sequence
          Length = 1023

 Score =  127 bits (64), Expect = 3e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 189 ttcactggctgctagattcgtcatgctccggctgcatctggttcagcacaaaagctccct 248
           ||||||||||||| ||||| ||||||||  | |||||||||||||| ||||| || || |
Sbjct: 750 ttcactggctgctcgattcatcatgctcttgttgcatctggttcagtacaaatgcccctt 691

                                                                       
Query: 249 caaggttcttatgcacctcggctttcattttctcctcctttgtccctctcttcagtttca 308
           |||||||||| || ||||||||||| |  |||||||||||  | || ||||| |||||||
Sbjct: 690 caaggttcttgtggacctcggctttgaacttctcctccttgtttcccctcttaagtttca 631

                                                               
Query: 309 tgacgatatcaaatttggcgaagtcttcaacaacctcagcctttgcgcgaac 360
           | |  || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 630 tcagaatgtcaaactttgcgaagtcttcaacaacctctgcctttgcacgaac 579
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>dbj|AK073275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025K21, full
           insert sequence
          Length = 1095

 Score =  127 bits (64), Expect = 3e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 189 ttcactggctgctagattcgtcatgctccggctgcatctggttcagcacaaaagctccct 248
           ||||||||||||| ||||| ||||||||  | |||||||||||||| ||||| || || |
Sbjct: 847 ttcactggctgctcgattcatcatgctcttgttgcatctggttcagtacaaatgcccctt 788

                                                                       
Query: 249 caaggttcttatgcacctcggctttcattttctcctcctttgtccctctcttcagtttca 308
           |||||||||| || ||||||||||| |  |||||||||||  | || ||||| |||||||
Sbjct: 787 caaggttcttgtggacctcggctttgaacttctcctccttgtttcccctcttaagtttca 728

                                                               
Query: 309 tgacgatatcaaatttggcgaagtcttcaacaacctcagcctttgcgcgaac 360
           | |  || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 727 tcagaatgtcaaactttgcgaagtcttcaacaacctctgcctttgcacgaac 676
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>ref|NM_188046.1| Oryza sativa (japonica cultivar-group), Ozsa8466 predicted mRNA
          Length = 753

 Score =  125 bits (63), Expect = 1e-25
 Identities = 144/171 (84%)
 Strand = Plus / Minus

                                                                       
Query: 190 tcactggctgctagattcgtcatgctccggctgcatctggttcagcacaaaagctccctc 249
           |||||||||||| ||||| ||||||||  | |||||||||||||| ||||| || || ||
Sbjct: 753 tcactggctgctcgattcatcatgctcttgttgcatctggttcagtacaaatgccccttc 694

                                                                       
Query: 250 aaggttcttatgcacctcggctttcattttctcctcctttgtccctctcttcagtttcat 309
           ||||||||| || ||||||||||| |  |||||||||||  | || ||||| ||||||||
Sbjct: 693 aaggttcttgtggacctcggctttgaacttctcctccttgtttcccctcttaagtttcat 634

                                                              
Query: 310 gacgatatcaaatttggcgaagtcttcaacaacctcagcctttgcgcgaac 360
            |  || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 633 cagaatgtcaaactttgcgaagtcttcaacaacctctgcctttgcacgaac 583
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 131/156 (83%)
 Strand = Plus / Plus

                                                                           
Query: 189     ttcactggctgctagattcgtcatgctccggctgcatctggttcagcacaaaagctccct 248
               ||||||||||||| ||||| ||||||||  | |||||||||||||| ||||| || || |
Sbjct: 9324918 ttcactggctgctcgattcatcatgctcttgttgcatctggttcagtacaaatgcccctt 9324977

                                                                           
Query: 249     caaggttcttatgcacctcggctttcattttctcctcctttgtccctctcttcagtttca 308
               |||||||||| || ||||||||||| |  |||||||||||  | || ||||| |||||||
Sbjct: 9324978 caaggttcttgtggacctcggctttgaacttctcctccttgtttcccctcttaagtttca 9325037

                                                   
Query: 309     tgacgatatcaaatttggcgaagtcttcaacaacct 344
               | |  || ||||| || |||||||||||||||||||
Sbjct: 9325038 tcagaatgtcaaactttgcgaagtcttcaacaacct 9325073
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>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0667A10
          Length = 152237

 Score =  111 bits (56), Expect = 2e-21
 Identities = 131/156 (83%)
 Strand = Plus / Plus

                                                                          
Query: 189    ttcactggctgctagattcgtcatgctccggctgcatctggttcagcacaaaagctccct 248
              ||||||||||||| ||||| ||||||||  | |||||||||||||| ||||| || || |
Sbjct: 101512 ttcactggctgctcgattcatcatgctcttgttgcatctggttcagtacaaatgcccctt 101571

                                                                          
Query: 249    caaggttcttatgcacctcggctttcattttctcctcctttgtccctctcttcagtttca 308
              |||||||||| || ||||||||||| |  |||||||||||  | || ||||| |||||||
Sbjct: 101572 caaggttcttgtggacctcggctttgaacttctcctccttgtttcccctcttaagtttca 101631

                                                  
Query: 309    tgacgatatcaaatttggcgaagtcttcaacaacct 344
              | |  || ||||| || |||||||||||||||||||
Sbjct: 101632 tcagaatgtcaaactttgcgaagtcttcaacaacct 101667
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>tpe|BN000509.1| TPA: TPA_exp: Zea mays mRNA for putative cystatin (cc4 gene)
          Length = 1052

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                       
Query: 226 ctggttcagcacaaaagctccctcaaggttcttatgcacctcggctttcattttctcctc 285
           |||||| |||||||| || || || ||| ||||||| ||||| ||||| || ||||||||
Sbjct: 734 ctggtttagcacaaaggccccttccaggctcttatggacctcagctttgatcttctcctc 675

                                                                      
Query: 286 ctttgtccctctcttcagtttcatgacgatatcaaatttggcgaagtcttcaacaacct 344
           |||  | ||||||||||||||||| |  || |||||||| || |||||||| |||||||
Sbjct: 674 cttgctgcctctcttcagtttcatcagaatgtcaaattttgcaaagtcttccacaacct 616
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>emb|AM055633.1| Zea mays mRNA for partial putative cystatin (cc4 gene)
          Length = 681

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                       
Query: 226 ctggttcagcacaaaagctccctcaaggttcttatgcacctcggctttcattttctcctc 285
           |||||| |||||||| || || || ||| ||||||| ||||| ||||| || ||||||||
Sbjct: 679 ctggtttagcacaaaggccccttccaggctcttatggacctctgctttgatcttctcctc 620

                                                                      
Query: 286 ctttgtccctctcttcagtttcatgacgatatcaaatttggcgaagtcttcaacaacct 344
           |||  | ||||||||||||||||| |  || |||||||| || |||||||| |||||||
Sbjct: 619 cttgctgcctctcttcagtttcatcagaatgtcaaattttgcaaagtcttccacaacct 561
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>emb|AL845270.6| Mouse DNA sequence from clone RP23-186C16 on chromosome 2, complete
             sequence
          Length = 218247

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 140   tgtttatttcttaatacaaactaca 164
             |||||||||||||||||||||||||
Sbjct: 16365 tgtttatttcttaatacaaactaca 16389
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>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314,
             complete sequence
          Length = 126349

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 289   tgtccctctcttcagtttcatgac 312
             ||||||||||||||||||||||||
Sbjct: 68172 tgtccctctcttcagtttcatgac 68195
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>gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, complete sequence
          Length = 203185

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 273   tcattttctcctcctttgtccctctct 299
             |||||| ||||||||||||||||||||
Sbjct: 78794 tcatttcctcctcctttgtccctctct 78820
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>gb|AF410861.1| Woodchuck hepatitis B virus isolate 342 polymerase gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 2111 cggctttcattttctcctcctt 2132
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>gb|AF410860.1| Woodchuck hepatitis B virus isolate 335 clone b polymerase gene,
            complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 2111 cggctttcattttctcctcctt 2132
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>gb|AF410859.1| Woodchuck hepatitis B virus isolate 335 polymerase gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 2111 cggctttcattttctcctcctt 2132
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>gb|AF410858.1| Woodchuck hepatitis B virus isolate 342 defective polymerase gene,
            complete cds
          Length = 2649

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 2105 cggctttcattttctcctcctt 2126
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>gb|AF410857.1| Woodchuck hepatitis B virus isolate 335 type I mutant polymerase
            gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 2111 cggctttcattttctcctcctt 2132
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>gb|AF410856.1| Woodchuck hepatitis B virus isolate 331 type IV mutant polymerase
            gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 2111 cggctttcattttctcctcctt 2132
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>gb|AF410855.1| Woodchuck hepatitis B virus isolate 331 type II mutant polymerase
            gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 2111 cggctttcattttctcctcctt 2132
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>emb|AL138778.13| Human DNA sequence from clone RP11-57K16 on chromosome 1q31.1-31.3,
              complete sequence
          Length = 167857

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 282    cctcctttgtccctctcttcag 303
              ||||||||||||||||||||||
Sbjct: 163775 cctcctttgtccctctcttcag 163754
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 281      tcctcctttgtccctctcttca 302
                ||||||||||||||||||||||
Sbjct: 12342351 tcctcctttgtccctctcttca 12342372
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 281    tcctcctttgtccctctcttca 302
              ||||||||||||||||||||||
Sbjct: 125905 tcctcctttgtccctctcttca 125926
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>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0599F09
          Length = 157415

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 281  tcctcctttgtccctctcttca 302
            ||||||||||||||||||||||
Sbjct: 7935 tcctcctttgtccctctcttca 7956
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>gb|M15954.1|OHVSAGA Woodchuck hepatitis virus mRNA encoding surface antigen, complete
            cds, polymerase, 3' end, and cor protein, 5' end
          Length = 1973

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 1129 cggctttcattttctcctcctt 1150
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>gb|M18752.1|OHVCGD Woodchuck hepatitis virus (WHV), complete genome, clone WHV 7
          Length = 3323

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 1214 cggctttcattttctcctcctt 1235
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>gb|M19183.1|OHVCGC Woodchuck hepatitis virus (WHV), complete genome, clone WHV 59
          Length = 3323

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 1214 cggctttcattttctcctcctt 1235
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>gb|M60766.1|MARB7 Woodchuck hepatitis virus surface antigen (preS) and X protein genes
          Length = 7808

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cggctttcattttctcctcctt 288
            ||||||||||||||||||||||
Sbjct: 4746 cggctttcattttctcctcctt 4767
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>gb|AY468486.1| Lentiviral transfer vector pHsCXW, complete sequence
          Length = 7207

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 268  ggctttcattttctcctcctt 288
            |||||||||||||||||||||
Sbjct: 2843 ggctttcattttctcctcctt 2863
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 327     cgaagtcttcaacaacctcag 347
               |||||||||||||||||||||
Sbjct: 1804013 cgaagtcttcaacaacctcag 1803993
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 271      tttcattttctcctcctttgtccct 295
                |||||||||||||| ||||||||||
Sbjct: 11926566 tttcattttctccttctttgtccct 11926542
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>gb|AC159106.2| Mus musculus chromosome 14 clone RP23-244I11, complete sequence
          Length = 168884

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 131   caggtttactgtttatttcttaata 155
             |||| ||||||||||||||||||||
Sbjct: 63841 caggcttactgtttatttcttaata 63817
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>gb|J04514.1|OHVHEPBA Woodchuck hepatitis B virus (WHV8), complete genome
          Length = 3323

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 268  ggctttcattttctcctcctt 288
            |||||||||||||||||||||
Sbjct: 1215 ggctttcattttctcctcctt 1235
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 327     cgaagtcttcaacaacctcag 347
               |||||||||||||||||||||
Sbjct: 2513015 cgaagtcttcaacaacctcag 2513035
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>gb|M11082.1|OHVCGB Woodchuck hepatitis virus 2, complete genome
          Length = 3320

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 268  ggctttcattttctcctcctt 288
            |||||||||||||||||||||
Sbjct: 1215 ggctttcattttctcctcctt 1235
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>gb|AC151753.1| Ornithorhynchus anatinus chromosome UNK clone OABb-467P24, complete
             sequence
          Length = 143764

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   tgtccctctcttcagtttca 308
             ||||||||||||||||||||
Sbjct: 47098 tgtccctctcttcagtttca 47079
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>gb|AC103388.6| Mus musculus chromosome 7, clone RP24-403B15, complete sequence
          Length = 164394

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    gcagaaagcataatatgcag 123
              ||||||||||||||||||||
Sbjct: 150867 gcagaaagcataatatgcag 150886
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>gb|L03425.1|BACBDGALB Bacillus circulans beta-D-galactosidase (bgaB) gene, complete cds and
            unidentified orfs
          Length = 3695

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  gatatcaaatttggcgaagt 332
            ||||||||||||||||||||
Sbjct: 3481 gatatcaaatttggcgaagt 3500
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>ref|XM_873520.1| PREDICTED: Bos taurus similar to Wilms tumour 1-associating protein
            isoform 1, transcript variant 6 (LOC532996), mRNA
          Length = 1460

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1401 acacattcccccattaacaccaac 1378
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>ref|XM_612242.2| PREDICTED: Bos taurus similar to Wilms tumour 1-associating protein
            isoform 1, transcript variant 1 (LOC532996), mRNA
          Length = 1495

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1436 acacattcccccattaacaccaac 1413
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>ref|XM_873116.1| PREDICTED: Bos taurus similar to Wilms tumour 1-associating protein
            isoform 1, transcript variant 4 (LOC532996), mRNA
          Length = 1463

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1404 acacattcccccattaacaccaac 1381
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>ref|XM_873010.1| PREDICTED: Bos taurus similar to Wilms tumour 1-associating protein
            isoform 1, transcript variant 3 (LOC532996), mRNA
          Length = 1237

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1178 acacattcccccattaacaccaac 1155
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>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete
              sequence
          Length = 218000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 277    tttctcctcctttgtccctctctt 300
              ||||||||||||| ||||||||||
Sbjct: 146030 tttctcctcctttctccctctctt 146053
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>gb|BC112754.1| Bos taurus similar to Wilms tumour 1-associating protein isoform 1,
            transcript variant 1, mRNA (cDNA clone IMAGE:8170368),
            complete cds
          Length = 1679

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1603 acacattcccccattaacaccaac 1580
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>emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on chromosome X Contains a
              tubulin beta polypeptide pseudogene, complete sequence
          Length = 197611

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    agtttcatgacgatatcaaa 321
              ||||||||||||||||||||
Sbjct: 112539 agtttcatgacgatatcaaa 112558
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>emb|AL158050.8| Human DNA sequence from clone RP3-437C15 on chromosome 6 Contains a
              Wilms' tumour 1-associating protein (WTAP) (KIAA0105)
              pseudogene, complete sequence
          Length = 149679

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     acacattccaccattaacaccaac 40
              ||||||||| ||||||||||||||
Sbjct: 122702 acacattcccccattaacaccaac 122725
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>emb|AL135914.25| Human DNA sequence from clone RP1-56L9 on chromosome 6 Contains a novel
              gene, the SOD2 gene for superoxide dismutase 2,
              mitochondrial, a pseudogene similar to heterogenous nuclear
              ribonucleoprotein H, the gene for Wilms' tumor
              1-associating protein (KIAA0105) (WTAP), the ACAT2 gene for
              acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme
              A thiolase), the TCP1 gene for t-complex 1 (CCT1, Ccta,
              D6S230E), the 5' end of the MRPL18 gene for mitochondrial
              ribosomal protein L18, and 4 CpG islands, complete sequence
          Length = 165802

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 17     acacattccaccattaacaccaac 40
              ||||||||| ||||||||||||||
Sbjct: 121039 acacattcccccattaacaccaac 121016
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>emb|AL121834.20|HSJ509I19 Human DNA sequence from clone RP3-509I19 on chromosome 6q23.1-24.1
              Contains a novel gene (includes DKFZP586D0623), the gene
              for a novel protein similar to mouse f-box only protein 16
              (Fbxo16) (Fbx16), a novel 7 transmembrane receptor
              (rhodopsin family) pseudogene similar to CCRL1, a novel
              gene, a suppressor of mif two 3 homolog 2 (yeast) (SMT3H2)
              pseudogene, the REPS1 gene for RALBP1 associated Eps domain
              containing 1 and two CpG islands, complete sequence
          Length = 178159

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 269    gctttcattttctcctcctttgtc 292
              |||||||||||| |||||||||||
Sbjct: 101338 gctttcattttcccctcctttgtc 101315
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>emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M2 on chromosome 6q25.1-26
            Contains the 3' end of the gene for KIAA1116 and a
            ribosomal protein L17 (60S ribosomal protein L17)
            (RPL17)(rpL17) pseudogene, complete sequence
          Length = 107506

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 272  ttcattttctcctcctttgtccctctct 299
            ||||| ||||||||| ||||||||||||
Sbjct: 8919 ttcatcttctcctcccttgtccctctct 8946
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>dbj|D14661.1|HUMORF05 Homo sapiens KIAA0105 mRNA, complete cds
          Length = 1622

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1563 acacattcccccattaacaccaac 1540
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>emb|CR622276.1| full-length cDNA clone CS0DI060YM16 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1679

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1628 acacattcccccattaacaccaac 1605
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>emb|CR607182.1| full-length cDNA clone CS0DI085YO18 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1660

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1625 acacattcccccattaacaccaac 1602
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>emb|CR605059.1| full-length cDNA clone CS0DE010YD16 of Placenta of Homo sapiens
            (human)
          Length = 1573

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1532 acacattcccccattaacaccaac 1509
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>emb|CR606450.1| full-length cDNA clone CS0DN001YM02 of Adult brain of Homo sapiens
            (human)
          Length = 1641

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1605 acacattcccccattaacaccaac 1582
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>emb|CR602734.1| full-length cDNA clone CS0DG004YF21 of B cells (Ramos cell line) of
            Homo sapiens (human)
          Length = 1656

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1613 acacattcccccattaacaccaac 1590
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>emb|CR602556.1| full-length cDNA clone CS0DH002YO11 of T cells (Jurkat cell line) of
            Homo sapiens (human)
          Length = 1694

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1667 acacattcccccattaacaccaac 1644
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>emb|CR595437.1| full-length cDNA clone CS0DF021YA16 of Fetal brain of Homo sapiens
           (human)
          Length = 1059

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 17  acacattccaccattaacaccaac 40
           ||||||||| ||||||||||||||
Sbjct: 996 acacattcccccattaacaccaac 973
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>emb|BX537293.9| Zebrafish DNA sequence from clone DKEYP-40D11 in linkage group 5,
             complete sequence
          Length = 134768

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ttatttcttaatacaaacta 162
             ||||||||||||||||||||
Sbjct: 34609 ttatttcttaatacaaacta 34628
to top
>gb|AC098804.6| Homo sapiens chromosome 16 clone RP11-244P19, complete sequence
          Length = 62309

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    gctagtaagaaacagagttc 73
             ||||||||||||||||||||
Sbjct: 20528 gctagtaagaaacagagttc 20509
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>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 268   ggctttcattttctcctcctttgt 291
             ||||||||| ||||||||||||||
Sbjct: 66830 ggctttcatcttctcctcctttgt 66853
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>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence
          Length = 137557

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   gctttcattttctcctcctt 288
             ||||||||||||||||||||
Sbjct: 61328 gctttcattttctcctcctt 61347
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>ref|NM_152857.1| Homo sapiens Wilms tumor 1 associated protein (WTAP), transcript
            variant 2, mRNA
          Length = 1644

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1563 acacattcccccattaacaccaac 1540
to top
>ref|NM_152858.1| Homo sapiens Wilms tumor 1 associated protein (WTAP), transcript
            variant 3, mRNA
          Length = 1742

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 17   acacattccaccattaacaccaac 40
            ||||||||| ||||||||||||||
Sbjct: 1661 acacattcccccattaacaccaac 1638
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     ttcgtcatgctccggctgca 224
               ||||||||||||||||||||
Sbjct: 3163640 ttcgtcatgctccggctgca 3163621
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>emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chromosome 4, complete
             sequence
          Length = 169452

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 281   tcctcctttgtccctctcttcagt 304
             |||||| |||||||||||||||||
Sbjct: 36686 tcctccattgtccctctcttcagt 36663


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,681,214
Number of Sequences: 3902068
Number of extensions: 3681214
Number of successful extensions: 84389
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84217
Number of HSP's gapped (non-prelim): 170
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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