>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC 3.6.1.-)|
          Length = 1401

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +2

Query: 62   TRAHTHSLGEAHLQTVHTHTARTHLYRLVVHKASSSQGPRLSGITTVPARYSTPL 226
            T  H+ +   A L T  ++  RTH Y++    +S +  P+ S +   P   S+PL
Sbjct: 1052 TTQHSSNQNPAGLTTKQSNLERTHSYKVPEKVSSGTNIPKKSAVMPSPGTSSSPL 1106

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +2

Query: 38  YMIHPDSRTRAHTHSLGEAHLQT-----VHTHTARTHL 136
           Y++HP +    HTH+    H+       +HTHT  THL
Sbjct: 55  YLLHPHTHVCTHTHTCTHTHIHASTHVCIHTHTF-THL 91

>RF2_THEMA (Q9X1R5) Peptide chain release factor 2 (RF-2)|
          Length = 369

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 288 NANTDRHHSSYNVPPSAGGEVAQSWWQLLSSGAPRW 395
           N   D +++  +V P AGG  +Q W Q+L     RW
Sbjct: 119 NGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRW 154

>VG_DROME (Q26366) Protein vestigial|
          Length = 453

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 56  SRTRAHTHSLGEAHLQT---VHTHTARTHLYRLVVHKASS 166
           S  R H HSL  AH       HTHT +T    L+V ++ +
Sbjct: 152 SSHRTHAHSLAHAHTHPHSHTHTHTHQTKEEDLIVPRSEA 191

>QUEF_AQUAE (O67073) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 129

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 109 YRLEMRFPERVCVCPCSG 56
           Y +E+ FPE  C+CP SG
Sbjct: 30  YMIEITFPEFTCLCPRSG 47

>LAMC1_MOUSE (P02468) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1607

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 146 PNDRDVCVLCVCVPSGDALPRESVCVPVFG 57
           PN  D C  C C P G  + ++S C PV G
Sbjct: 873 PNPADKCKACACNPYG-TVQQQSSCNPVTG 901

>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 234 KPQSTVLRSSYTRTYAHENANTDRHHSSYNVPPSAGGEVAQSWWQLLSSGAP 389
           +P+S    S  + T+        RHH   N+PPS  G V +S    L++  P
Sbjct: 301 RPRSKSQSSGSSATHPISVPGARRHHHLVNLPPSQTGLVRRSRTDSLAATPP 352

>ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 93   RISRRYTHTQHAHISIVWSYTKLAALKDRACQALPQYQRG 212
            +I + Y H +   +SI   + KLAA++ +A   +  Y RG
Sbjct: 2639 KIRKHYLHLRATVVSIQRRHRKLAAVRTQAVICIQSYYRG 2678

>MYOTI_HUMAN (Q9UBF9) Myotilin (Titin immunoglobulin domain protein)|
           (Myofibrillar titin-like Ig domains protein) (57 kDa
           cytoskeletal protein)
          Length = 498

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
 Frame = +3

Query: 24  HLTLDT*SIPIPEHGHTHTLSGKRISRRYTHTQHAHISIV------WSYTKLAALKDRAC 185
           H+T+ + + P     H  +  G+R++  Y  +  + +S +      ++ +K+ +  D   
Sbjct: 61  HITMSSSAFPASPQQHAGSNPGQRVTTTYNQSPASFLSSILPSQPDYNSSKIPSAMDSNY 120

Query: 186 QALPQYQRGTPLH*YTKPQSTVLRSSYTRTYAHE 287
           Q   Q   G P++   KP  T       RT  HE
Sbjct: 121 Q---QSSAGQPIN--AKPSQTANAKPIPRTPDHE 149

>RM02_CANGA (Q6FS31) 60S ribosomal protein L2, mitochondrial precursor|
          Length = 368

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 165 ALKDRACQAL-PQYQRGTPLH*YTKPQSTVLRSSYTRTYAHENANTDRHHSSYNVPP 332
           ++KD A + L P+   G  +    KP   ++R   T+ Y  EN    R H+ Y V P
Sbjct: 31  SMKDSAGRRLGPKKYEGQDV----KPGEIIMRQRGTKFYPGENVKIGRDHTIYAVEP 83

>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)|
          Length = 1321

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 234 KPQSTVLRSSYTRTYAHENANTDRHHSSYNVPPSAGGEVAQSWWQLLSSGAP 389
           +P+S    S  + T+        RHH   N+PPS  G V +S    L++  P
Sbjct: 298 RPRSKSQSSGSSATHPISVPGARRHHHLVNLPPSQTGLVRRSRTDSLAATPP 349

>RF2_LACPL (Q88YL5) Peptide chain release factor 2 (RF-2)|
          Length = 357

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 300 DRHHSSYNVPPSAGGEVAQSWWQLLSSGAPRW 395
           DR+++   + P AGG  +Q W  +L     RW
Sbjct: 109 DRNNAILEIHPGAGGTESQDWGAMLLRMYTRW 140

>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC5)
            (Subtilisin/kexin-like protease PC5) (PC6)
            (Subtilisin-like proprotein convertase 6) (SPC6)
          Length = 1877

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
 Frame = -3

Query: 197  W*CLTSAVLESC*L-CVRPNDRDVCVLCVCVPSGDALPRES----VCVPVFGNRDGSCIK 33
            W  +TS   E C   CV  +  D+C  C+  P    L  E      C   F  +DG C  
Sbjct: 1247 WPSVTSGSCEKCSEDCVSCSGADLCQQCLSQPDNTLLLHEGRCYHSCPEGFYAKDGVCEH 1306

Query: 32   C 30
            C
Sbjct: 1307 C 1307

>MDHP_PEA (P21528) Malate dehydrogenase [NADP], chloroplast precursor (EC|
           1.1.1.82) (NADP-MDH)
          Length = 441

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
 Frame = +1

Query: 166 LSRT---ALVRHYHSTSAVLHST 225
           LSRT    L RHYHST A LH T
Sbjct: 24  LSRTRTRTLPRHYHSTFAPLHRT 46

>LCR76_ARATH (P82785) Putative low-molecular-weight cysteine-rich protein LCR76|
           precursor
          Length = 86

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 333 KAVHYMTSGVCQCWRSRARTCVCTSY-EGRCFG 238
           K+++Y   G+C  WRS  R C+   + +GRC G
Sbjct: 37  KSLNYR--GLCLKWRSCKRVCISEGFPDGRCKG 67

>RF2_LACLA (Q9CGX1) Peptide chain release factor 2 (RF-2)|
          Length = 365

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/100 (22%), Positives = 39/100 (39%)
 Frame = +3

Query: 96  ISRRYTHTQHAHISIVWSYTKLAALKDRACQALPQYQRGTPLH*YTKPQSTVLRSSYTRT 275
           +  +Y + Q  +  +  + T L  L++ A + +        +    K +S  L     + 
Sbjct: 62  LKAKYDNYQAMNNMLEEAQTMLEMLQEEADEEMQAELEEMTIALGQKIESYELEIMLNQP 121

Query: 276 YAHENANTDRHHSSYNVPPSAGGEVAQSWWQLLSSGAPRW 395
           Y H NA  + H       P +GG  +Q W  +L     RW
Sbjct: 122 YDHMNAVLEIH-------PGSGGTESQDWGSMLMRMYTRW 154

>LAMC1_HUMAN (P11047) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1609

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 146 PNDRDVCVLCVCVPSGDALPRESVCVPVFG 57
           PN  D C  C C P G  + ++S C PV G
Sbjct: 875 PNPADKCKACNCNPYG-TMKQQSSCNPVTG 903


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,550,108
Number of Sequences: 219361
Number of extensions: 1173304
Number of successful extensions: 3167
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3166
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)