| Clone Name | rbast15e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 38.2 bits (19), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 104 ttacacacactcatatgactgat 126 |||||||||||||||||| |||| Sbjct: 5108 ttacacacactcatatgattgat 5086
>gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, complete sequence Length = 174095 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 atccttacacacactcata 118 ||||||||||||||||||| Sbjct: 6051 atccttacacacactcata 6033
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 38.2 bits (19), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 135 aacagacccaccgaactgaactg 157 ||||||| ||||||||||||||| Sbjct: 63454 aacagacacaccgaactgaactg 63476
>dbj|AP006585.1| Synechocystis sp. PCC 6803 plasmid pSYSX DNA, complete sequence Length = 106004 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 acgatgtgctcataattac 40 ||||||||||||||||||| Sbjct: 87640 acgatgtgctcataattac 87658
>gb|AY897209.1| Zea mays laccase 1 (LAC1) gene, complete cds Length = 3771 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 gtgctcataattactggcg 45 ||||||||||||||||||| Sbjct: 1345 gtgctcataattactggcg 1327
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 104 ttacacacactcatatgactgat 126 |||||||||||||||||| |||| Sbjct: 18477102 ttacacacactcatatgattgat 18477080 Score = 38.2 bits (19), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 104 ttacacacactcatatgactgat 126 |||||||||||||||||| |||| Sbjct: 18465643 ttacacacactcatatgattgat 18465621
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 38.2 bits (19), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 104 ttacacacactcatatgactgat 126 |||||||||||||||||| |||| Sbjct: 138976 ttacacacactcatatgattgat 138954 Score = 38.2 bits (19), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 104 ttacacacactcatatgactgat 126 |||||||||||||||||| |||| Sbjct: 127517 ttacacacactcatatgattgat 127495
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gggccaggtcgacgatgtc 21 ||||||||||||||||||| Sbjct: 4624625 gggccaggtcgacgatgtc 4624643
>gb|AF115313.1|AF115313 Thermomonospora curvata PkwR (pkwR) and PkwA (pkwA) genes, complete cds Length = 4619 Score = 38.2 bits (19), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 135 aacagacccaccgaactgaactg 157 ||||||| ||||||||||||||| Sbjct: 4437 aacagacacaccgaactgaactg 4415
>gb|AC131660.4| Mus musculus BAC clone RP23-241P13 from 9, complete sequence Length = 220247 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 atccttacacacactcata 118 ||||||||||||||||||| Sbjct: 149930 atccttacacacactcata 149912
>emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chromosome X, complete sequence Length = 221439 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 atgtgctcataattactgg 43 ||||||||||||||||||| Sbjct: 171883 atgtgctcataattactgg 171865 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,066,410 Number of Sequences: 3902068 Number of extensions: 1066410 Number of successful extensions: 78022 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77899 Number of HSP's gapped (non-prelim): 123 length of query: 165 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 143 effective length of database: 17,147,199,772 effective search space: 2452049567396 effective search space used: 2452049567396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)