>MBB1_CHLRE (Q9FNS4) PsbB mRNA maturation factor Mbb1, chloroplast precursor|
          Length = 662

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
 Frame = -2

Query: 256 SGSGSSHAPRRPRKDGWWQWHANACSRTYVLLLLYHPT*LI------TPRHATPCSSGKV 95
           S S SS + RR        W+A A S+T V +  Y PT ++        R +TP  S  +
Sbjct: 24  SSSSSSSSSRRT-------WYAPARSQTGVQVAAYEPTAVLQLAPSAVSRRSTPVRSSII 76

Query: 94  SDRLSLPARAAFGSRFQSTTS 32
           +D  S  +    G R  +T S
Sbjct: 77  ADLSSSGSGDGEGERGDATGS 97

>TPSN_CHICK (O73895) Tapasin precursor (TPSN) (TPN) (TAP-binding protein)|
           (TAP-associated protein)
          Length = 430

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 253 GSGSSHAPRRPRKDGWWQWHANACSRTY 170
           GSG+S +PR    D W   H  A   TY
Sbjct: 319 GSGTSQSPRDTVMDSWTSGHRQAADGTY 346


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,278,131
Number of Sequences: 219361
Number of extensions: 602018
Number of successful extensions: 1470
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)