| Clone Name | rbast15d06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC151840.5| Mus musculus BAC clone RP23-150L19 from chromosome 18, complete sequence Length = 197898 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 tcctccctggaattccttcctt 347 |||||||||||||||||||||| Sbjct: 74525 tcctccctggaattccttcctt 74504
>gb|AC147051.2| Mus musculus BAC clone RP23-90H22 from chromosome 8, complete sequence Length = 224213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tacaggcagcaagaagagaca 71 ||||||||||||||||||||| Sbjct: 174420 tacaggcagcaagaagagaca 174400
>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete sequence Length = 199956 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcagcaagaagagacaaaca 75 ||||||||||||||||||||| Sbjct: 30414 ggcagcaagaagagacaaaca 30394
>gb|AC127276.3| Mus musculus BAC clone RP24-221M17 from chromosome 8, complete sequence Length = 120935 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tacaggcagcaagaagagaca 71 ||||||||||||||||||||| Sbjct: 36269 tacaggcagcaagaagagaca 36249
>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence Length = 188819 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcagcaagaagagacaaaca 75 ||||||||||||||||||||| Sbjct: 140314 ggcagcaagaagagacaaaca 140294
>gb|AC102735.9| Mus musculus chromosome 5, clone RP24-237I4, complete sequence Length = 167871 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gttgatatgaaaaaactagc 258 |||||||||||||||||||| Sbjct: 107911 gttgatatgaaaaaactagc 107892
>ref|XM_459679.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E09097g) partial mRNA Length = 726 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aagagacaaacaaactagtt 83 |||||||||||||||||||| Sbjct: 494 aagagacaaacaaactagtt 513
>emb|AL139350.17| Human DNA sequence from clone RP11-307O10 on chromosome 20 Contains part of a novel gene, an EST, an STS and GSSs, complete sequence Length = 181585 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tagcacacggccataaaagg 312 |||||||||||||||||||| Sbjct: 173355 tagcacacggccataaaagg 173374
>emb|AL121781.38|HSJ1164C1 Human DNA sequence from clone RP5-1164C1 on chromosome 20 Contains (part of) two putative novel genes, ESTs, STSs and GSSs, complete sequence Length = 178568 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tagcacacggccataaaagg 312 |||||||||||||||||||| Sbjct: 78275 tagcacacggccataaaagg 78294
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aagagacaaacaaactagtt 83 |||||||||||||||||||| Sbjct: 662378 aagagacaaacaaactagtt 662359
>gb|AC156631.2| Mus musculus BAC clone RP24-501O22 from chromosome 9, complete sequence Length = 165660 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tccctggaattccttccttt 348 |||||||||||||||||||| Sbjct: 67507 tccctggaattccttccttt 67488
>emb|CR384101.11| Zebrafish DNA sequence from clone DKEY-211G8 in linkage group 19, complete sequence Length = 110664 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 attcatctcaaatacacaag 236 |||||||||||||||||||| Sbjct: 13654 attcatctcaaatacacaag 13635
>gb|BC039673.1| Homo sapiens, clone IMAGE:5170855, mRNA Length = 918 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tagcacacggccataaaagg 312 |||||||||||||||||||| Sbjct: 588 tagcacacggccataaaagg 569
>emb|AL626786.11| Mouse DNA sequence from clone RP23-269L6 on chromosome X, complete sequence Length = 156879 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 caggcagcaagaagagacaaacaa 76 ||||||||||||| |||||||||| Sbjct: 5449 caggcagcaagaacagacaaacaa 5426 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,774,644 Number of Sequences: 3902068 Number of extensions: 3774644 Number of successful extensions: 67290 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67262 Number of HSP's gapped (non-prelim): 28 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)