>ref|NM_197250.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0062C05.24), mRNA
          Length = 1404

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  gtggtgggctgcactgtctccgacacgcggtttccgccggtgagcgacgtgacggctccg 356
            |||||||||||||| || || || ||  || | |||||||||||||||||||||||  ||
Sbjct: 1241 gtggtgggctgcacggtgtcggagacatgggtgccgccggtgagcgacgtgacggcgtcg 1182

                  
Query: 357  cgcgcc 362
            ||||||
Sbjct: 1181 cgcgcc 1176

>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                          
Query: 297    gtggtgggctgcactgtctccgacacgcggtttccgccggtgagcgacgtgacggctccg 356
              |||||||||||||| || || || ||  || | |||||||||||||||||||||||  ||
Sbjct: 126486 gtggtgggctgcacggtgtcggagacatgggtgccgccggtgagcgacgtgacggcgtcg 126427

                    
Query: 357    cgcgcc 362
              ||||||
Sbjct: 126426 cgcgcc 126421

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                            
Query: 297      gtggtgggctgcactgtctccgacacgcggtttccgccggtgagcgacgtgacggctccg 356
                |||||||||||||| || || || ||  || | |||||||||||||||||||||||  ||
Sbjct: 18828750 gtggtgggctgcacggtgtcggagacatgggtgccgccggtgagcgacgtgacggcgtcg 18828691

                      
Query: 357      cgcgcc 362
                ||||||
Sbjct: 18828690 cgcgcc 18828685

>dbj|AK062588.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G05, full
            insert sequence
          Length = 1607

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  gtggtgggctgcactgtctccgacacgcggtttccgccggtgagcgacgtgacggctccg 356
            |||||||||||||| || || || ||  || | |||||||||||||||||||||||  ||
Sbjct: 1303 gtggtgggctgcacggtgtcggagacatgggtgccgccggtgagcgacgtgacggcgtcg 1244

                  
Query: 357  cgcgcc 362
            ||||||
Sbjct: 1243 cgcgcc 1238

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                            
Query: 297      gtggtgggctgcactgtctccgacacgcggtttccgccggtgagcgacgtgacggctccg 356
                |||||||||||||| || || || ||  || | |||||||||||||||||||||||  ||
Sbjct: 18840004 gtggtgggctgcacggtgtcggagacatgggtgccgccggtgagcgacgtgacggcgtcg 18839945

                      
Query: 357      cgcgcc 362
                ||||||
Sbjct: 18839944 cgcgcc 18839939

>gb|AC147474.2| Mus musculus BAC clone RP23-425D11 from chromosome 19, complete
             sequence
          Length = 195273

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   cagatgaacccaagcacctga 146
             |||||||||||||||||||||
Sbjct: 55321 cagatgaacccaagcacctga 55341

>gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome 19, complete sequence
          Length = 192484

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    cagatgaacccaagcacctga 146
              |||||||||||||||||||||
Sbjct: 174288 cagatgaacccaagcacctga 174308

>gb|AC124371.2| Mus musculus BAC clone RP24-556P1 from chromosome 8, complete sequence
          Length = 158228

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     cagaaacatgtacatacacac 21
             |||||||||||||||||||||
Sbjct: 37618 cagaaacatgtacatacacac 37598

>gb|AC153519.9| Mus musculus 10 BAC RP23-442N6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197257

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      cagaaacatgtacatacacac 21
              |||||||||||||||||||||
Sbjct: 187784 cagaaacatgtacatacacac 187764

>gb|AC107642.14| Mus musculus chromosome 8, clone RP23-54J1, complete sequence
          Length = 218180

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     cagaaacatgtacatacacac 21
             |||||||||||||||||||||
Sbjct: 51054 cagaaacatgtacatacacac 51074

>ref|NM_183523.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3084

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 260 tccctccgccgcgacgccaccccc 283
           |||||||||||| |||||||||||
Sbjct: 862 tccctccgccgccacgccaccccc 885

>ref|NM_187693.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1548

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 cctccgccgcgacgccaccc 281
           ||||||||||||||||||||
Sbjct: 207 cctccgccgcgacgccaccc 226

>gb|AC147782.8| Mus musculus chromosome 12, clone RP24-284A21, complete sequence
          Length = 155158

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aaacatgtacatacacacgc 23
             ||||||||||||||||||||
Sbjct: 41859 aaacatgtacatacacacgc 41840

>gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, complete sequence
          Length = 172228

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   tctgtggtgggctgcactgt 313
             ||||||||||||||||||||
Sbjct: 76417 tctgtggtgggctgcactgt 76398

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 262     cctccgccgcgacgccaccc 281
               ||||||||||||||||||||
Sbjct: 6390336 cctccgccgcgacgccaccc 6390355

>ref|XM_381765.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01589.1)
            partial mRNA
          Length = 6492

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  cccctctgtggtgggctgca 309
            ||||||||||||||||||||
Sbjct: 1937 cccctctgtggtgggctgca 1956

>gb|AC121592.3| Mus musculus BAC clone RP23-292K4 from 8, complete sequence
          Length = 186807

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      cagaaacatgtacatacaca 20
              ||||||||||||||||||||
Sbjct: 143881 cagaaacatgtacatacaca 143900

>emb|AL355606.14| Human DNA sequence from clone RP11-90I7 on chromosome X Contains the
             gene for hepatocellular carcinoma-associated antigen 127
             (HCA127) (FLJ12856, FLJ12856, KIAA1166), complete sequence
          Length = 163283

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   ccctctgtggtgggctgcac 310
             ||||||||||||||||||||
Sbjct: 38876 ccctctgtggtgggctgcac 38895

>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   cctccgccgcgacgccaccc 281
             ||||||||||||||||||||
Sbjct: 70462 cctccgccgcgacgccaccc 70481

>emb|AL663055.13| Mouse DNA sequence from clone RP23-102H8 on chromosome 11 Contains the
             5' end of the Gria1 gene for glutamate receptor,
             ionotropic, AMPA1 (alpha 1), complete sequence
          Length = 202981

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     agaaacatgtacatacacac 21
             ||||||||||||||||||||
Sbjct: 59089 agaaacatgtacatacacac 59108

>emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in linkage group 7,
             complete sequence
          Length = 163069

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aacatgtacatacacacgcg 24
             ||||||||||||||||||||
Sbjct: 17858 aacatgtacatacacacgcg 17877

>gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 185497

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 199   acgctgcagcacttcacatcacat 222
             ||||||||||||||||| ||||||
Sbjct: 77299 acgctgcagcacttcacttcacat 77276

>gb|CP000268.1| Rhodoferax ferrireducens DSM 15236 plasmid1, complete sequence
          Length = 257447

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   gttggtcctcggagcctcgc 246
             ||||||||||||||||||||
Sbjct: 93486 gttggtcctcggagcctcgc 93505

>ref|NM_140822.2| Drosophila melanogaster CG6836-RA (CG6836), mRNA
          Length = 1309

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 199 acgctgcagcacttcacatcacat 222
           ||||||||||||||||| ||||||
Sbjct: 172 acgctgcagcacttcacttcacat 149

>gb|AY069212.1| Drosophila melanogaster GH26215 full length cDNA
          Length = 1309

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 199 acgctgcagcacttcacatcacat 222
           ||||||||||||||||| ||||||
Sbjct: 157 acgctgcagcacttcacttcacat 134

>gb|DQ346669.1| Rhodococcus sp. DK17 succinyl CoA:3-oxoadipate CoA transferase beta
            subunit (pcaJ), succinyl CoA:3-oxoadipate CoA transferase
            alpha subunit (pcaI), protocatechuate 3,4 dioxygenase
            beta subunit (pcaH), protocatechuate 3,4 dioxygenase
            alpha subunit (pcaG), 3-carboxymuconate cycloisomerase
            (pcaB), 3-oxoadipate enol-lactone hydrolase (pcaL), and
            PcaR genes, complete cds
          Length = 6372

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  cgcgcgccctggtcaccgcc 374
            ||||||||||||||||||||
Sbjct: 4135 cgcgcgccctggtcaccgcc 4154

>gb|AC159283.2| Mus musculus BAC clone RP23-317B21 from chromosome 12, complete sequence
          Length = 245361

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      aaacatgtacatacacacgc 23
              ||||||||||||||||||||
Sbjct: 213591 aaacatgtacatacacacgc 213572

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 262     cctccgccgcgacgccaccc 281
               ||||||||||||||||||||
Sbjct: 6389549 cctccgccgcgacgccaccc 6389568

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 260    tccctccgccgcgacgccaccccc 283
              |||||||||||| |||||||||||
Sbjct: 556156 tccctccgccgccacgccaccccc 556133

>gb|AC073465.5| Homo sapiens BAC clone RP11-158L8 from 2, complete sequence
          Length = 135752

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     agaaacatgtacatacacac 21
             ||||||||||||||||||||
Sbjct: 93961 agaaacatgtacatacacac 93980

>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439B06
          Length = 135991

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 260   tccctccgccgcgacgccaccccc 283
             |||||||||||| |||||||||||
Sbjct: 30761 tccctccgccgccacgccaccccc 30738

>dbj|AK109454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-F07, full
           insert sequence
          Length = 623

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 cctccgccgcgacgccaccc 281
           ||||||||||||||||||||
Sbjct: 266 cctccgccgcgacgccaccc 285

>dbj|AK101096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024N16, full
           insert sequence
          Length = 3085

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 260 tccctccgccgcgacgccaccccc 283
           |||||||||||| |||||||||||
Sbjct: 863 tccctccgccgccacgccaccccc 886

>emb|AL749527.1| Zebrafish DNA sequence from clone XX-180I15 in linkage group 9,
             complete sequence
          Length = 61817

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    tgatttacagacatacaacacgtg 57
             ||||||||| ||||||||||||||
Sbjct: 24838 tgatttacaaacatacaacacgtg 24815

>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete
             sequence
          Length = 279088

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 199   acgctgcagcacttcacatcacat 222
             ||||||||||||||||| ||||||
Sbjct: 33344 acgctgcagcacttcacttcacat 33321

>gb|AC125520.3| Mus musculus BAC clone RP24-281J17 from 8, complete sequence
          Length = 178227

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cagaaacatgtacatacaca 20
              ||||||||||||||||||||
Sbjct: 175499 cagaaacatgtacatacaca 175480

>gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, complete sequence
          Length = 205150

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    cgcggtttccgccggtgagc 341
              ||||||||||||||||||||
Sbjct: 159191 cgcggtttccgccggtgagc 159172


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,288,623
Number of Sequences: 3902068
Number of extensions: 2288623
Number of successful extensions: 42418
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42277
Number of HSP's gapped (non-prelim): 136
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)