ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast14h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, com... 220 2e-54
2gb|AY857755.1| Triticum monococcum peroxidase 1 (POX1) mRNA, com... 82 1e-12
3emb|AJ276227.1|HVU276227 Hordeum vulgare partial mRNA for peroxi... 82 1e-12
4gb|AY857756.1| Triticum monococcum peroxidase 2 (POX2) mRNA, com... 74 2e-10
5emb|X56011.1|TAPERO Wheat mRNA for peroxidase 74 2e-10
6emb|X58396.1|HVPEROXI Barley mRNA for peroxidase (EC=1.11.1.7) 74 2e-10
7gb|L36093.1|BLYPRX Barley peroxidase mRNA, complete cds 74 2e-10
8gb|AY506493.1| Triticum aestivum PXB5-like gene, complete sequence 50 0.003
9gb|AY506492.1| Triticum aestivum PXB4-like gene, complete sequence 50 0.003
10gb|AY506485.1| Triticum aestivum PXCW3-like gene, complete sequence 50 0.003
11gb|AY506484.1| Triticum aestivum PXCW2-like gene, complete sequence 50 0.003
12gb|AY857757.1| Triticum monococcum peroxidase 3 (POX3) mRNA, com... 50 0.003
13emb|X53675.1|TAPEROXIG Wheat (T. aesitvum) mRNA for peroxidase (... 50 0.003
14emb|X85228.1|TAPOX2 T.aestivum pox2 gene 50 0.003
15gb|AF387866.1| Triticum aestivum peroxidase (pxc1A) gene, pxc1A-... 50 0.003
16gb|AF078872.1|AF078872 Avena sativa cultivar Ogle peroxidase PXC... 50 0.003
17gb|AF078871.1|AF078871 Avena sativa cultivar Ogle peroxidase PXC... 50 0.003
18emb|X85227.1|TAPOX1 T.aestivum pox1 gene 44 0.21
19gb|AY506494.1| Triticum aestivum PXC1-like gene, complete sequence 42 0.84
20gb|AY506491.1| Triticum aestivum PXB3-like gene, complete sequence 42 0.84
21gb|AY506490.1| Triticum aestivum PXB2-like gene, partial sequence 42 0.84
22gb|AY506489.1| Triticum aestivum PXB1-like gene, complete sequence 42 0.84
23gb|AY506488.1| Triticum aestivum PXA2-like gene, complete sequence 42 0.84
24gb|AY506487.1| Triticum aestivum PXA1-like gene, complete sequence 42 0.84
25ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predic... 42 0.84
26ref|XM_875638.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
27ref|XM_875566.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
28ref|XM_616352.2| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
29ref|XM_875421.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
30ref|XM_875345.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
31ref|XM_875270.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
32ref|XM_875206.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
33ref|XM_875138.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
34ref|XM_875057.1| PREDICTED: Bos taurus similar to paired box gen... 42 0.84
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.84
36ref|XM_544533.2| PREDICTED: Canis familiaris similar to paired b... 42 0.84
37gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.84
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
40dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
41dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
42dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
43dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
44dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
45dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
46dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
47dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
48dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
49dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
50dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
51dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
52dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
53dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
54dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
55dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
56tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 0.84
57tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 0.84
58gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 0.84
59gb|U12314.1|CCU12314 Cenchrus ciliaris clone PX7 peroxidase mRNA... 40 3.3 
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds
          Length = 1282

 Score =  220 bits (111), Expect = 2e-54
 Identities = 200/229 (87%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                        
Query: 28   agtataggcgcgaacggacaccgactagccagcacgcccgtgcattggcattcaagcacg 87
            |||||| | |||||||||||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 1201 agtatacgtgcgaacggacaccgaccagccagcacgcccgtgcattcgcattcaaggacg 1142

                                                                        
Query: 88   cacacatcaggccatggcgaccttgtcgtgcgagcccgggcgggggagcatttcgatcgc 147
            || ||||||| || |||||||||| ||||  |||||||| ||| ||||||| |||||| |
Sbjct: 1141 catacatcagcccttggcgaccttatcgtcggagcccggtcggcggagcatctcgatcac 1082

                                                                        
Query: 148  cccagcgtaaaaagcggacaaaaaggaggaggacgggttgacaaggctgcagttgaggcg 207
            ||||||||   | |||||| || | ||||||| ||||||||| |||||||||||||||||
Sbjct: 1081 cccagcgt---aggcggacgaagaagaggaggccgggttgacgaggctgcagttgaggcg 1025

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            |||||  ||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1024 gatctccccctgcgtgccggtcttggggctgatgttgcccatcttgatc 976
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>gb|AY857755.1| Triticum monococcum peroxidase 1 (POX1) mRNA, complete cds
          Length = 1259

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 208 gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
           ||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 951 gatctggccctgcgtccctgtcttgggcgcgatgttgcccatcttgatc 903
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>emb|AJ276227.1|HVU276227 Hordeum vulgare partial mRNA for peroxidase (prx8 gene)
          Length = 930

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 208 gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
           ||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 884 gatctggccctgcgtccccgtcttgggcgcgatgttgcccatcttgatc 836
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>gb|AY857756.1| Triticum monococcum peroxidase 2 (POX2) mRNA, complete cds
          Length = 1250

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 208 gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
           ||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 999 gatctggccctgcgtccctgtcttcggcgcgatgttgcccatcttgatc 951
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>emb|X56011.1|TAPERO Wheat mRNA for peroxidase
          Length = 1247

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 208 gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
           |||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 994 gatctgcccctgcgtgcctgtcttcggcgcgatgttgcccatcttgatc 946
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>emb|X58396.1|HVPEROXI Barley mRNA for peroxidase (EC=1.11.1.7)
          Length = 1285

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 208 gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
           ||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 985 gatctggccctgcgtccctgtcttgggggcgatgttgcccatcttgatc 937
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>gb|L36093.1|BLYPRX Barley peroxidase mRNA, complete cds
          Length = 1262

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 208 gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
           ||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 985 gatctggccctgcgtccctgtcttgggagcgatgttgcccatcttgatc 937
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>gb|AY506493.1| Triticum aestivum PXB5-like gene, complete sequence
          Length = 1198

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 1166 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 1118
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>gb|AY506492.1| Triticum aestivum PXB4-like gene, complete sequence
          Length = 1196

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 1166 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 1118
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>gb|AY506485.1| Triticum aestivum PXCW3-like gene, complete sequence
          Length = 2466

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 1826 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 1778
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>gb|AY506484.1| Triticum aestivum PXCW2-like gene, complete sequence
          Length = 2456

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 1817 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 1769
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>gb|AY857757.1| Triticum monococcum peroxidase 3 (POX3) mRNA, complete cds
          Length = 1295

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 208 gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
           ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 976 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 928
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>emb|X53675.1|TAPEROXIG Wheat (T. aesitvum) mRNA for peroxidase (EC 1.11.1.7)
          Length = 3240

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 2508 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 2460
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>emb|X85228.1|TAPOX2 T.aestivum pox2 gene
          Length = 1658

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 1376 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 1328
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>gb|AF387866.1| Triticum aestivum peroxidase (pxc1A) gene, pxc1A-2A allele, complete
            cds
          Length = 2458

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 1820 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 1772
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>gb|AF078872.1|AF078872 Avena sativa cultivar Ogle peroxidase PXC6 precursor (pxc6) gene,
            complete cds
          Length = 1197

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| ||||||   |||| |||||| ||||||||||||
Sbjct: 1164 gatctggccctgcgtcccggtcagcggcgagatgtttcccatcttgatc 1116
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>gb|AF078871.1|AF078871 Avena sativa cultivar Ogle peroxidase PXC2 precursor (pxc2) gene,
            complete cds
          Length = 1191

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            ||||||||||||||| ||||||   |||| |||||| ||||||||||||
Sbjct: 1158 gatctggccctgcgtcccggtcagcggcgagatgtttcccatcttgatc 1110
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>emb|X85227.1|TAPOX1 T.aestivum pox1 gene
          Length = 1722

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccat 249
            |||||| |||||||| || ||||| ||||||||||| |||||
Sbjct: 1440 gatctgcccctgcgtccccgtctttggcgcgatgttccccat 1399
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>gb|AY506494.1| Triticum aestivum PXC1-like gene, complete sequence
          Length = 1165

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatctt 252
            ||||||||||||||| |||||    ||||||||||| ||||||||
Sbjct: 1135 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatctt 1091
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>gb|AY506491.1| Triticum aestivum PXB3-like gene, complete sequence
          Length = 1163

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatctt 252
            ||||||||||||||| |||||    ||||||||||| ||||||||
Sbjct: 1131 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatctt 1087
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>gb|AY506490.1| Triticum aestivum PXB2-like gene, partial sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatctt 252
            ||||||||||||||| |||||    ||||||||||| ||||||||
Sbjct: 1131 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatctt 1087
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>gb|AY506489.1| Triticum aestivum PXB1-like gene, complete sequence
          Length = 1076

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatctt 252
            ||||||||||||||| |||||    ||||||||||| ||||||||
Sbjct: 1046 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatctt 1002
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>gb|AY506488.1| Triticum aestivum PXA2-like gene, complete sequence
          Length = 1165

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatcttgatc 256
            |||||| |||||||| |||||    ||||||||||| ||||||||||||
Sbjct: 1135 gatctgcccctgcgtcccggtgagcggcgcgatgtttcccatcttgatc 1087
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>gb|AY506487.1| Triticum aestivum PXA1-like gene, complete sequence
          Length = 1165

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 208  gatctggccctgcgtgccggtcttgggcgcgatgttgcccatctt 252
            ||||||||||||||| |||||    ||||||||||| ||||||||
Sbjct: 1135 gatctggccctgcgtcccggtgagcggcgcgatgtttcccatctt 1091
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>ref|NM_183816.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1062

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 176 gaggacgggttgacaaggctgcagttgaggcggatct 212
           ||||||||||||||   |||||||||||| |||||||
Sbjct: 983 gaggacgggttgacggcgctgcagttgagccggatct 947



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 cgatgttgcccatcttgatc 256
           ||||||||||||||||||||
Sbjct: 922 cgatgttgcccatcttgatc 903
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>ref|XM_875638.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 10 (LOC536229), mRNA
          Length = 1548

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 545 aagcggacaagaaggaggaggacgg 569
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>ref|XM_875566.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 9 (LOC536229), mRNA
          Length = 1527

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 524 aagcggacaagaaggaggaggacgg 548
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>ref|XM_616352.2| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 1 (LOC536229), mRNA
          Length = 1512

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 509 aagcggacaagaaggaggaggacgg 533
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>ref|XM_875421.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 8 (LOC536229), mRNA
          Length = 1578

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 509 aagcggacaagaaggaggaggacgg 533
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>ref|XM_875345.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 7 (LOC536229), mRNA
          Length = 1566

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 563 aagcggacaagaaggaggaggacgg 587
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>ref|XM_875270.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 6 (LOC536229), mRNA
          Length = 1524

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 521 aagcggacaagaaggaggaggacgg 545
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>ref|XM_875206.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 5 (LOC536229), mRNA
          Length = 1563

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 560 aagcggacaagaaggaggaggacgg 584
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>ref|XM_875138.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 4 (LOC536229), mRNA
          Length = 1533

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 524 aagcggacaagaaggaggaggacgg 548
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>ref|XM_875057.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript
           variant 3 (LOC536229), mRNA
          Length = 1557

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 548 aagcggacaagaaggaggaggacgg 572
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 196      gcagttgaggcggatctggccctgcgtgccggt 228
                ||||||||| | ||||| |||||||||||||||
Sbjct: 12591370 gcagttgagcctgatctcgccctgcgtgccggt 12591338
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>ref|XM_544533.2| PREDICTED: Canis familiaris similar to paired box gene 7 isoform 2
           (LOC487408), mRNA
          Length = 1860

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 159 aagcggacaaaaaggaggaggacgg 183
           |||||||||| ||||||||||||||
Sbjct: 902 aagcggacaagaaggaggaggacgg 926
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>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 196   gcagttgaggcggatctggccctgcgtgccggt 228
             ||||||||| | ||||| |||||||||||||||
Sbjct: 85619 gcagttgagcctgatctcgccctgcgtgccggt 85651
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 196      gcagttgaggcggatctggccctgcgtgccggt 228
                ||||||||| | ||||| |||||||||||||||
Sbjct: 12588133 gcagttgagcctgatctcgccctgcgtgccggt 12588101
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 176      gaggacgggttgacaaggctgcagttgaggcggatct 212
                ||||||||||||||   |||||||||||| |||||||
Sbjct: 12552477 gaggacgggttgacggcgctgcagttgagccggatct 12552441



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 237      cgatgttgcccatcttgatc 256
                ||||||||||||||||||||
Sbjct: 12552416 cgatgttgcccatcttgatc 12552397
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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 176   gaggacgggttgacaaggctgcagttgaggcggatct 212
             ||||||||||||||   |||||||||||| |||||||
Sbjct: 64087 gaggacgggttgacggcgctgcagttgagccggatct 64051



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   cgatgttgcccatcttgatc 256
             ||||||||||||||||||||
Sbjct: 64026 cgatgttgcccatcttgatc 64007
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>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1135C02
          Length = 152306

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 176    gaggacgggttgacaaggctgcagttgaggcggatct 212
              ||||||||||||||   |||||||||||| |||||||
Sbjct: 138092 gaggacgggttgacggcgctgcagttgagccggatct 138056



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    cgatgttgcccatcttgatc 256
              ||||||||||||||||||||
Sbjct: 138031 cgatgttgcccatcttgatc 138012
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>dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D07, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H05, full
            insert sequence
          Length = 1265

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G09, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G05, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C02, full
            insert sequence
          Length = 1252

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B03, full
            insert sequence
          Length = 1215

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D07, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C06, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccggt 1007
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>dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C01, full
            insert sequence
          Length = 1264

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1036 gcagttgagcctgatctcgccctgcgtgccggt 1004
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>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full
            insert sequence
          Length = 1271

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 176  gaggacgggttgacaaggctgcagttgaggcggatct 212
            ||||||||||||||   |||||||||||| |||||||
Sbjct: 1053 gaggacgggttgacggcgctgcagttgagccggatct 1017
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>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full
            insert sequence
          Length = 1492

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 176  gaggacgggttgacaaggctgcagttgaggcggatct 212
            ||||||||||||||   |||||||||||| |||||||
Sbjct: 1058 gaggacgggttgacggcgctgcagttgagccggatct 1022



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 cgatgttgcccatcttgatc 256
           ||||||||||||||||||||
Sbjct: 997 cgatgttgcccatcttgatc 978
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>dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O18, full
            insert sequence
          Length = 1263

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 1035 gcagttgagcctgatctcgccctgcgtgccggt 1003
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>dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A04, full
           insert sequence
          Length = 1031

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 196 gcagttgaggcggatctggccctgcgtgccggt 228
           ||||||||| | ||||| |||||||||||||||
Sbjct: 803 gcagttgagcctgatctcgccctgcgtgccggt 771
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>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full
           insert sequence
          Length = 1015

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 176 gaggacgggttgacaaggctgcagttgaggcggatct 212
           ||||||||||||||   |||||||||||| |||||||
Sbjct: 747 gaggacgggttgacggcgctgcagttgagccggatct 711



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 cgatgttgcccatcttgatc 256
           ||||||||||||||||||||
Sbjct: 686 cgatgttgcccatcttgatc 667
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>tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx41 gene for
            class III peroxidase 41 precursor, exons 1-4
          Length = 5018

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  gcagttgaggcggatctggccctgcgtgccggt 228
            ||||||||| | ||||| |||||||||||||||
Sbjct: 5003 gcagttgagcctgatctcgccctgcgtgccggt 4971
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>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for
            class III peroxidase 15 precursor, exons 1-3
          Length = 5322

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 176  gaggacgggttgacaaggctgcagttgaggcggatct 212
            ||||||||||||||   |||||||||||| |||||||
Sbjct: 5243 gaggacgggttgacggcgctgcagttgagccggatct 5207



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  cgatgttgcccatcttgatc 256
            ||||||||||||||||||||
Sbjct: 5182 cgatgttgcccatcttgatc 5163
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 81      aagcacgcacacatcaggcca 101
               |||||||||||||||||||||
Sbjct: 3726479 aagcacgcacacatcaggcca 3726459
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>gb|U12314.1|CCU12314 Cenchrus ciliaris clone PX7 peroxidase mRNA, complete cds
          Length = 1335

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 cgatgttgcccatcttgatc 256
           ||||||||||||||||||||
Sbjct: 931 cgatgttgcccatcttgatc 912


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,619,945
Number of Sequences: 3902068
Number of extensions: 1619945
Number of successful extensions: 31346
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 31201
Number of HSP's gapped (non-prelim): 136
length of query: 256
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 234
effective length of database: 17,147,199,772
effective search space: 4012444746648
effective search space used: 4012444746648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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