>dbj|AK120423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D02, full
           insert sequence
          Length = 595

 Score =  123 bits (62), Expect = 4e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                       
Query: 270 ccaaaatagtttgtcaccaaacccatgacagcaaacatgaaagccatggagagctgcttg 329
           |||| |||||| |||||||| ||||| || |||||||||||||||||||| | |||||||
Sbjct: 381 ccaagatagttcgtcaccaagcccataactgcaaacatgaaagccatggataactgcttg 322

                                                         
Query: 330 aggtcattctcgaagttcttcatgttcgccagcgactgcgcgcaga 375
           || ||||||||||| |||||||||||| |||| |||||||||||||
Sbjct: 321 agatcattctcgaaattcttcatgttcaccagagactgcgcgcaga 276

>gb|AY106742.1| Zea mays PCO115076 mRNA sequence
          Length = 794

 Score =  119 bits (60), Expect = 7e-24
 Identities = 122/142 (85%), Gaps = 3/142 (2%)
 Strand = Plus / Minus

                                                                       
Query: 237 gcagattagcgctttgtaccacctggacgag---gcccaaaatagtttgtcaccaaaccc 293
           |||| ||||||||||||||  ||||||||||   | ||||||||||| ||||||| ||||
Sbjct: 370 gcagtttagcgctttgtactgcctggacgagcggggccaaaatagttcgtcaccagaccc 311

                                                                       
Query: 294 atgacagcaaacatgaaagccatggagagctgcttgaggtcattctcgaagttcttcatg 353
           || |||||||||||||| ||||| || |||||||| || || ||||| ||||||||||||
Sbjct: 310 ataacagcaaacatgaaggccatagaaagctgcttcagatcgttctcaaagttcttcatg 251

                                 
Query: 354 ttcgccagcgactgcgcgcaga 375
           || |||| |||||| |||||||
Sbjct: 250 tttgccaacgactgagcgcaga 229

>ref|XM_469825.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 550

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                       
Query: 304 acatgaaagccatggagagctgcttgaggtcattctcgaagttcttcatgttcgccagcg 363
           |||||||||||||||| | ||||||||| ||||||||||| |||||||||||| |||| |
Sbjct: 306 acatgaaagccatggataactgcttgagatcattctcgaaattcttcatgttcaccagag 247

                       
Query: 364 actgcgcgcaga 375
           ||||||||||||
Sbjct: 246 actgcgcgcaga 235

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                            
Query: 304      acatgaaagccatggagagctgcttgaggtcattctcgaagttcttcatgttcgccagcg 363
                |||||||||||||||| | ||||||||| ||||||||||| |||||||||||| |||| |
Sbjct: 30952645 acatgaaagccatggataactgcttgagatcattctcgaaattcttcatgttcaccagag 30952586

                            
Query: 364      actgcgcgcaga 375
                ||||||||||||
Sbjct: 30952585 actgcgcgcaga 30952574

>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
              genomic sequence, complete sequence
          Length = 168759

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                          
Query: 304    acatgaaagccatggagagctgcttgaggtcattctcgaagttcttcatgttcgccagcg 363
              |||||||||||||||| | ||||||||| ||||||||||| |||||||||||| |||| |
Sbjct: 143419 acatgaaagccatggataactgcttgagatcattctcgaaattcttcatgttcaccagag 143478

                          
Query: 364    actgcgcgcaga 375
              ||||||||||||
Sbjct: 143479 actgcgcgcaga 143490

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                            
Query: 304      acatgaaagccatggagagctgcttgaggtcattctcgaagttcttcatgttcgccagcg 363
                |||||||||||||||| | ||||||||| ||||||||||| |||||||||||| |||| |
Sbjct: 31043168 acatgaaagccatggataactgcttgagatcattctcgaaattcttcatgttcaccagag 31043109

                            
Query: 364      actgcgcgcaga 375
                ||||||||||||
Sbjct: 31043108 actgcgcgcaga 31043097

>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                         
Query: 304   acatgaaagccatggagagctgcttgaggtcattctcgaagttcttcatgttcgccagcg 363
             ||||||| |||||||||||||| || || ||||||||||||||||||||||| |||| ||
Sbjct: 95340 acatgaaggccatggagagctgtttcagatcattctcgaagttcttcatgtttgccaacg 95281

                 
Query: 364   actg 367
             ||||
Sbjct: 95280 actg 95277



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                         
Query: 238   cagattagcgctttgtaccacctggacgaggc---ccaaaatagtttgtcaccaaaccca 294
             |||||||||||||||| |  |||||||||||    ||||||||||| ||||||| |||||
Sbjct: 99432 cagattagcgctttgtgctgcctggacgaggggggccaaaatagttcgtcaccagaccca 99373

                        
Query: 295   tgacagcaaac 305
             | |||||||||
Sbjct: 99372 taacagcaaac 99362

>ref|NM_120878.2| Arabidopsis thaliana unknown protein AT5G07960 mRNA, complete cds
          Length = 634

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 aggcccaaaatagtttgtcaccaaacccatgacagcaaacatgaaagccatggagagctg 325
           |||||| || |||||||| ||||| ||||| | ||||||||| | ||||||||||| |||
Sbjct: 404 aggccctaagtagtttgtaaccaatcccattatagcaaacatcatagccatggagatctg 345

                                               
Query: 326 cttgaggtcattctcgaagttcttcatgttcgccag 361
           ||| |  ||||| || |||||| ||||||| |||||
Sbjct: 344 ctttaaatcattttccaagttcctcatgttggccag 309

>gb|BT004553.1| Arabidopsis thaliana At5g07960 gene, complete cds
          Length = 324

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 aggcccaaaatagtttgtcaccaaacccatgacagcaaacatgaaagccatggagagctg 325
           |||||| || |||||||| ||||| ||||| | ||||||||| | ||||||||||| |||
Sbjct: 300 aggccctaagtagtttgtaaccaatcccattatagcaaacatcatagccatggagatctg 241

                                               
Query: 326 cttgaggtcattctcgaagttcttcatgttcgccag 361
           ||| |  ||||| || |||||| ||||||| |||||
Sbjct: 240 ctttaaatcattttccaagttcctcatgttggccag 205

>gb|AY086219.1| Arabidopsis thaliana clone 226 mRNA, complete sequence
          Length = 637

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 aggcccaaaatagtttgtcaccaaacccatgacagcaaacatgaaagccatggagagctg 325
           |||||| || |||||||| ||||| ||||| | ||||||||| | ||||||||||| |||
Sbjct: 407 aggccctaagtagtttgtaaccaatcccattatagcaaacatcatagccatggagatctg 348

                                               
Query: 326 cttgaggtcattctcgaagttcttcatgttcgccag 361
           ||| |  ||||| || |||||| ||||||| |||||
Sbjct: 347 ctttaaatcattttccaagttcctcatgttggccag 312

>gb|AC068762.15| Homo sapiens 3 BAC RP11-215N17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152541

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 34     actatctttataaaataactggaag 58
              |||||||||||||||||| ||||||
Sbjct: 126692 actatctttataaaataaatggaag 126716

>gb|AC123954.4| Mus musculus BAC clone RP23-249L6 from 13, complete sequence
          Length = 200727

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    aaagccatggagagctgctt 328
              ||||||||||||||||||||
Sbjct: 114563 aaagccatggagagctgctt 114582

>emb|AL133229.40| Human DNA sequence from clone RP5-1167E19 on chromosome 20 Contains
             STSs, GSSs and a CpG island, complete sequence
          Length = 161776

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   caaaatagtttgtcaccaaa 290
             ||||||||||||||||||||
Sbjct: 79786 caaaatagtttgtcaccaaa 79805

>ref|XM_779666.1| PREDICTED: Strongylocentrotus purpuratus similar to citron
            (LOC579556), mRNA
          Length = 4917

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  gctgcttgaggtcattctcg 341
            ||||||||||||||||||||
Sbjct: 1399 gctgcttgaggtcattctcg 1380

>gb|AC010609.7| Homo sapiens chromosome 5 clone CTB-4E7, complete sequence
          Length = 142576

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    cttggtccctaactgatgag 123
              ||||||||||||||||||||
Sbjct: 139002 cttggtccctaactgatgag 138983

>gb|AC009185.6|AC009185 Homo sapiens chromosome 5 clone CTC-248O19, complete sequence
          Length = 87973

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cttggtccctaactgatgag 123
             ||||||||||||||||||||
Sbjct: 31764 cttggtccctaactgatgag 31745

>gb|AC093892.3| Homo sapiens BAC clone RP11-702L18 from 2, complete sequence
          Length = 111078

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gaaattttaacaggaaactt 219
             ||||||||||||||||||||
Sbjct: 86650 gaaattttaacaggaaactt 86631

>gb|AC008389.4|AC008389 Homo sapiens chromosome 5 clone CTC-232D5, complete sequence
          Length = 80074

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cttggtccctaactgatgag 123
             ||||||||||||||||||||
Sbjct: 70427 cttggtccctaactgatgag 70408

>gb|AC093038.4| Homo sapiens BAC clone RP13-541C6 from 2, complete sequence
          Length = 93111

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   acatgaaagccatggagagctgct 327
             |||||||||||||| |||||||||
Sbjct: 88565 acatgaaagccatgaagagctgct 88542

>emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2591A6 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196431

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     aaaataactggaagaacaag 64
              ||||||||||||||||||||
Sbjct: 194326 aaaataactggaagaacaag 194345

>emb|AL121766.5|CNS01DSA Human chromosome 14 DNA sequence BAC R-412H8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158064

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aaaataactggaagaacaag 64
              ||||||||||||||||||||
Sbjct: 128396 aaaataactggaagaacaag 128377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,426,184
Number of Sequences: 3902068
Number of extensions: 3426184
Number of successful extensions: 59269
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59211
Number of HSP's gapped (non-prelim): 56
length of query: 375
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 353
effective length of database: 17,147,199,772
effective search space: 6052961519516
effective search space used: 6052961519516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)