>gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosome 7, complete sequence
          Length = 186858

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 42    taagacatgtttaaggggtttgat 65
             ||||||||||||||||||||||||
Sbjct: 96135 taagacatgtttaaggggtttgat 96112

>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   ccttggcgaggtcctccttgccgcc 265
             ||||||| |||||||||||||||||
Sbjct: 37733 ccttggccaggtcctccttgccgcc 37757

>ref|XM_550509.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 752

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 229 tcagtgcttcgaccttggcgaggtcctccttgccgc 264
           ||||||||||  ||| ||||| ||||||||||||||
Sbjct: 563 tcagtgcttcatcctcggcgatgtcctccttgccgc 528



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 270 cctcagcggccttcctcttcggtgaggtcctc 301
           |||| |||||||||||| ||||||| ||||||
Sbjct: 426 cctcggcggccttcctcctcggtgaagtcctc 395

>ref|NM_185435.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 957

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 229 tcagtgcttcgaccttggcgaggtcctccttgccgc 264
           ||||||||||  ||| ||||| ||||||||||||||
Sbjct: 793 tcagtgcttcatcctcggcgatgtcctccttgccgc 758



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 270 cctcagcggccttcctcttcggtgaggtcctc 301
           |||| |||||||||||| ||||||| ||||||
Sbjct: 656 cctcggcggccttcctcctcggtgaagtcctc 625

>ref|NM_184902.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1962

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 cctccttgccgccggtgcct 272
           ||||||||||||||||||||
Sbjct: 777 cctccttgccgccggtgcct 758

>gb|AY740402.1| Bos taurus keratin 5 gene, complete cds
          Length = 5994

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 224  atccatcagtgcttcgaccttggc 247
            |||||||||||| |||||||||||
Sbjct: 2443 atccatcagtgcatcgaccttggc 2420

>ref|XM_614666.2| PREDICTED: Bos taurus similar to T-lymphokine-activated killer
           cell-originated protein kinase (T-LAK cell-originated
           protein kinase) (PDZ-binding kinase)
           (Spermatogenesis-related protein kinase) (SPK)
           (MAPKK-like protein kinase) (Nori-3) (LOC534781), mRNA
          Length = 1764

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 60  tttgattcatactctgataatcat 83
           |||||| |||||||||||||||||
Sbjct: 220 tttgatacatactctgataatcat 197

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 253      cctccttgccgccggtgcct 272
                ||||||||||||||||||||
Sbjct: 31844103 cctccttgccgccggtgcct 31844084

>ref|NM_001008663.1| Bos taurus keratin 5 (epidermolysis bullosa simplex,
           Dowling-Meara/Kobner/Weber-Cockayne types) (KRT5), mRNA
          Length = 1872

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 224 atccatcagtgcttcgaccttggc 247
           |||||||||||| |||||||||||
Sbjct: 897 atccatcagtgcatcgaccttggc 874

>gb|BC112889.1| Bos taurus cDNA clone IMAGE:8163679, containing frame-shift errors
          Length = 1991

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 60  tttgattcatactctgataatcat 83
           |||||| |||||||||||||||||
Sbjct: 431 tttgatacatactctgataatcat 408

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 270    cctcagcggccttcctcttcggtgaggtcctc 301
              |||| |||||||||||| ||||||| ||||||
Sbjct: 874715 cctcggcggccttcctcctcggtgaagtcctc 874746



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 229    tcagtgcttcgaccttggcgaggtcctccttgccgc 264
              ||||||||||  ||| ||||| ||||||||||||||
Sbjct: 874578 tcagtgcttcatcctcggcgatgtcctccttgccgc 874613

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 253      cctccttgccgccggtgcct 272
                ||||||||||||||||||||
Sbjct: 31934619 cctccttgccgccggtgcct 31934600

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     ccttggcgaggtcctccttg 260
               ||||||||||||||||||||
Sbjct: 3049691 ccttggcgaggtcctccttg 3049710

>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5)
          Length = 11618

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 270  cctcagcggccttcctcttcggtgaggtcctc 301
            |||| |||||||||||| ||||||| ||||||
Sbjct: 6805 cctcggcggccttcctcctcggtgaagtcctc 6836



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 229  tcagtgcttcgaccttggcgaggtcctccttgccgc 264
            ||||||||||  ||| ||||| ||||||||||||||
Sbjct: 6668 tcagtgcttcatcctcggcgatgtcctccttgccgc 6703

>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0019F11
          Length = 123673

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 270   cctcagcggccttcctcttcggtgaggtcctc 301
             |||| |||||||||||| ||||||| ||||||
Sbjct: 55610 cctcggcggccttcctcctcggtgaagtcctc 55641



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 229   tcagtgcttcgaccttggcgaggtcctccttgccgc 264
             ||||||||||  ||| ||||| ||||||||||||||
Sbjct: 55473 tcagtgcttcatcctcggcgatgtcctccttgccgc 55508

>dbj|AK100507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099L20, full
           insert sequence
          Length = 2135

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 cctccttgccgccggtgcct 272
           ||||||||||||||||||||
Sbjct: 694 cctccttgccgccggtgcct 675

>dbj|AK073098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003O07, full
           insert sequence
          Length = 956

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 229 tcagtgcttcgaccttggcgaggtcctccttgccgc 264
           ||||||||||  ||| ||||| ||||||||||||||
Sbjct: 792 tcagtgcttcatcctcggcgatgtcctccttgccgc 757



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 270 cctcagcggccttcctcttcggtgaggtcctc 301
           |||| |||||||||||| ||||||| ||||||
Sbjct: 655 cctcggcggccttcctcctcggtgaagtcctc 624

>dbj|AK060414.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E09, full
           insert sequence
          Length = 774

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 229 tcagtgcttcgaccttggcgaggtcctccttgccgc 264
           ||||||||||  ||| ||||| ||||||||||||||
Sbjct: 585 tcagtgcttcatcctcggcgatgtcctccttgccgc 550



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 270 cctcagcggccttcctcttcggtgaggtcctc 301
           |||| |||||||||||| ||||||| ||||||
Sbjct: 448 cctcggcggccttcctcctcggtgaagtcctc 417

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 303     ccgctgacccagccgccggc 322
               ||||||||||||||||||||
Sbjct: 4746398 ccgctgacccagccgccggc 4746417

>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete
             sequence
          Length = 150663

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   cctccttgccgccggtgcct 272
             ||||||||||||||||||||
Sbjct: 45356 cctccttgccgccggtgcct 45337


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,664,127
Number of Sequences: 3902068
Number of extensions: 2664127
Number of successful extensions: 73469
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73183
Number of HSP's gapped (non-prelim): 286
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)