>gb|BT019021.1| Zea mays clone Contig521.F mRNA sequence
          Length = 1346

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 371 tcatcatctttcatgtacttttcctgcaccgccgctgt 408
           |||||||||||||||||||| ||||||||  |||||||
Sbjct: 942 tcatcatctttcatgtacttctcctgcacttccgctgt 905

>gb|AY106817.1| Zea mays PCO140690 mRNA sequence
          Length = 1428

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 371  tcatcatctttcatgtacttttcctgcaccgccgctgt 408
            |||||||||||||||||||| ||||||||  |||||||
Sbjct: 1056 tcatcatctttcatgtacttctcctgcacttccgctgt 1019

>ref|XM_466196.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 352  gcttgttttctgaatgatttcatcatctttcatgtacttttcctgcacc 400
            |||||| ||||| | || ||| || |||||||||||||| |||||||||
Sbjct: 1036 gcttgtcttctgcacgaattcgtcgtctttcatgtacttctcctgcacc 988

>ref|XM_506823.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470G10.26 mRNA
          Length = 1212

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 352  gcttgttttctgaatgatttcatcatctttcatgtacttttcctgcacc 400
            |||||| ||||| | || ||| || |||||||||||||| |||||||||
Sbjct: 1031 gcttgtcttctgcacgaattcgtcgtctttcatgtacttctcctgcacc 983

>ref|XM_686766.1| PREDICTED: Danio rerio similar to hephaestin (LOC563409), mRNA
          Length = 2147

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 326 agtgaatgtcgatctcattgc 346
           |||||||||||||||||||||
Sbjct: 928 agtgaatgtcgatctcattgc 908

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 352      gcttgttttctgaatgatttcatcatctttcatgtacttttcctgcacc 400
                |||||| ||||| | || ||| || |||||||||||||| |||||||||
Sbjct: 20982743 gcttgtcttctgcacgaattcgtcgtctttcatgtacttctcctgcacc 20982791

>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0470G10
          Length = 145419

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                               
Query: 352    gcttgttttctgaatgatttcatcatctttcatgtacttttcctgcacc 400
              |||||| ||||| | || ||| || |||||||||||||| |||||||||
Sbjct: 106215 gcttgtcttctgcacgaattcgtcgtctttcatgtacttctcctgcacc 106263

>dbj|AK121253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101O11, full
            insert sequence
          Length = 1212

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 352  gcttgttttctgaatgatttcatcatctttcatgtacttttcctgcacc 400
            |||||| ||||| | || ||| || |||||||||||||| |||||||||
Sbjct: 1031 gcttgtcttctgcacgaattcgtcgtctttcatgtacttctcctgcacc 983

>dbj|AK065270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L01, full
            insert sequence
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 352  gcttgttttctgaatgatttcatcatctttcatgtacttttcctgcacc 400
            |||||| ||||| | || ||| || |||||||||||||| |||||||||
Sbjct: 1036 gcttgtcttctgcacgaattcgtcgtctttcatgtacttctcctgcacc 988

>emb|AL929315.8| Zebrafish DNA sequence from clone CH211-69K21, complete sequence
          Length = 174143

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 326  agtgaatgtcgatctcattgc 346
            |||||||||||||||||||||
Sbjct: 2213 agtgaatgtcgatctcattgc 2233

>gb|AY458649.1| Uncultured bacterium 582 clone EBAC080-L028H02 genomic sequence
          Length = 145153

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    gatttcatcatctttcatgt 386
              ||||||||||||||||||||
Sbjct: 108008 gatttcatcatctttcatgt 108027

>gb|AC121848.3| Mus musculus BAC clone RP24-87G10 from chromosome 15, complete sequence
          Length = 231797

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    catgctgaaatcaaccaagt 139
              ||||||||||||||||||||
Sbjct: 109522 catgctgaaatcaaccaagt 109541

>gb|AC116658.4| Mus musculus BAC clone RP23-293I4 from 17, complete sequence
          Length = 199182

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   catgctgaaatcaaccaagt 139
             ||||||||||||||||||||
Sbjct: 41085 catgctgaaatcaaccaagt 41066

>emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A18 on chromosome 1p13.2-21.1
              Contains a keratin 18 (KRT18) pseudogene, the 3' end of the
              RAP1A gene for RAP1A member of RAS oncogene family, three
              novel genes, the DDX20 gene for DEAD (Asp-Glu-Ala-Asp) box
              polypeptide 20, the 3' end of the KCND3 gene for potassium
              voltage-gated channel Shal-related subfamily member 3 and
              two CpG islands, complete sequence
          Length = 128379

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    tgttttctgaatgatttcat 374
              ||||||||||||||||||||
Sbjct: 117124 tgttttctgaatgatttcat 117105

>gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    aatgatttcatcatctttca 383
              ||||||||||||||||||||
Sbjct: 148325 aatgatttcatcatctttca 148344

>gb|AC125334.4| Homo sapiens BAC clone RP11-569E7 from 4, complete sequence
          Length = 18306

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  ttgttttctgaatgatttca 373
            ||||||||||||||||||||
Sbjct: 3783 ttgttttctgaatgatttca 3802

>gb|AC109341.7| Homo sapiens chromosome 11, clone CTD-2504M7, complete sequence
          Length = 202761

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   gtagcaagaaacttcaggca 254
             ||||||||||||||||||||
Sbjct: 82793 gtagcaagaaacttcaggca 82812

>gb|AC116156.3| Homo sapiens chromosome 11, clone RP11-44D14, complete sequence
          Length = 176597

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    gtagcaagaaacttcaggca 254
              ||||||||||||||||||||
Sbjct: 172429 gtagcaagaaacttcaggca 172448

>gb|AC007638.8| Homo sapiens chromosome 17, clone RP11-515O17, complete sequence
          Length = 182051

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   aatgatttcatcatctttca 383
             ||||||||||||||||||||
Sbjct: 14001 aatgatttcatcatctttca 14020

>gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosome 17, complete sequence
          Length = 185556

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    catgctgaaatcaaccaagt 139
              ||||||||||||||||||||
Sbjct: 132460 catgctgaaatcaaccaagt 132441

>gb|AC124577.5| Mus musculus BAC clone RP23-162P10 from 9, complete sequence
          Length = 218248

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     ggttaggtgcttggtatataattg 37
              |||||||| |||||||||||||||
Sbjct: 155826 ggttaggttcttggtatataattg 155803


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,122,819
Number of Sequences: 3902068
Number of extensions: 3122819
Number of successful extensions: 84010
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83960
Number of HSP's gapped (non-prelim): 50
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)