ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast14f01 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 47.0 bits (110), Expect = 1e-05 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 G +R E +W +F++AG+SDY+I+ LG R +IEVY Sbjct: 328 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVY 363
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 G++R+E +W LF +AGF YKI G +IE+Y Sbjct: 316 GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 G++R+E +W LF +AGF YKI G +IE+Y Sbjct: 316 GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 G++R+E +W LF +AGF YKI G +IE+Y Sbjct: 316 GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 35.8 bits (81), Expect = 0.027 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -1 Query: 331 RQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 ++R+ ++W L + AGF+ YK+ G R +IE Y Sbjct: 321 KERTMNEWEKLISAAGFTSYKLTPAFGVRSLIEAY 355
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 35.4 bits (80), Expect = 0.036 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 331 RQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 ++R+ S+W L AGF YK+ G R +IE Y Sbjct: 322 KERTMSEWEKLIYDAGFKSYKLTPAFGVRSLIEAY 356
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 32.7 bits (73), Expect = 0.23 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 G++R+E +W L AG+ +KI + + VIE Y Sbjct: 310 GKERTEEEWKKLIHDAGYKGHKITQITAVQSVIEAY 345
>POLG_MCFA (P33515) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3341 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -2 Query: 291 KQGSAIIKLSKDWVPEVLSRFTSERFFKSPPKEYPDVPLHAVCFVYVWMVCF 136 + SA+ LS EV R+T+ER V + CF+ VW +CF Sbjct: 2058 RTASALWDLSDVMNGEVRDRYTTERSLTVVMAFVLGVSIMLSCFIAVWALCF 2109
>DBP6_CANGA (Q6FST5) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 651 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/20 (45%), Positives = 17/20 (85%) Frame = -2 Query: 261 KDWVPEVLSRFTSERFFKSP 202 ++W+PEV+S+F S++F + P Sbjct: 371 QNWIPEVMSKFKSDKFDQMP 390
>IMT1_MESCR (P45986) Inositol 4-methyltransferase (EC 2.1.1.129)| Length = 365 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVYK 224 G++RS+ D+ L +K GFS ++ V+E+YK Sbjct: 328 GKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364
>CHOMT_MEDSA (P93324) Isoliquiritigenin 2'-O-methyltransferase (EC 2.1.1.-)| (Chalcone O-methyltransferase) (ChOMT) Length = 372 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKR-LGARGVIEVYK 224 GR+R+E + L +GFS +++ R + GV+E YK Sbjct: 335 GRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372
>LYPA3_MOUSE (Q8VEB4) 1-O-acylceramide synthase precursor (EC 2.3.1.-) (ACS)| (Lysosomal phospholipase A2) (Lysophospholipase 3) (LCAT-like lysophospholipase) (LLPL) Length = 412 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +3 Query: 96 ILANLRQSIY--FFHQSRPSIHKQSTLHARVHQGTPWVDF*KTVHL 227 ++A+ ++Y +F Q +P + K +HA V G PW KT+ + Sbjct: 194 LVAHSMGNVYMLYFLQRQPQVWKDKYIHAFVSLGAPWGGVAKTLRV 239
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 227 G++R++ W + AGFS KI + VIEV+ Sbjct: 314 GKERTKEVWEKIVKSAGFSGCKIRHIAAIQSVIEVF 349
>HIOM_MACMU (Q8HZJ0) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)| (Acetylserotonin O-methyltransferase) (ASMT) Length = 345 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGA 248 G++R+ + +H+L + AGF D++ K+ GA Sbjct: 309 GQERTPTHYHMLLSSAGFRDFQF-KKTGA 336
>HIOM_HUMAN (P46597) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)| (Acetylserotonin O-methyltransferase) (ASMT) Length = 345 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -1 Query: 334 GRQRSESDWHVLFTKAGFSDYKIVKRLGA 248 G++R+ + +H+L + AGF D++ K+ GA Sbjct: 309 GQERTPTHYHMLLSSAGFRDFQF-KKTGA 336
>TBP12_NEIMB (Q06987) Transferrin-binding protein 1 precursor| Length = 908 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 182 TSGYSLGGLLKNRSLVNLDNTSGTQSF 262 +SGYS+ G+ KNR + +D S QS+ Sbjct: 96 SSGYSIRGMDKNRVSLTVDGVSQIQSY 122
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/64 (23%), Positives = 26/64 (40%) Frame = -2 Query: 327 SVVKVTGMCYSPKQGSAIIKLSKDWVPEVLSRFTSERFFKSPPKEYPDVPLHAVCFVYVW 148 S V VT +C+SPK + V + L ++ PP D P+ + +++ Sbjct: 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG 250 Query: 147 MVCF 136 F Sbjct: 251 TYVF 254 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,646,000 Number of Sequences: 219361 Number of extensions: 1048431 Number of successful extensions: 2703 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2656 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2703 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
