>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds
          Length = 1373

 Score =  184 bits (93), Expect = 1e-43
 Identities = 265/319 (83%), Gaps = 8/319 (2%)
 Strand = Plus / Minus

                                                                        
Query: 17   tattaattattggaaaaggaaatatgatacaaagatgacagaaattacaagcttgtcacg 76
            |||| ||| ||| ||||||||| |||| |||||||||| |||||||||||||||||||| 
Sbjct: 1337 tatttattgttgaaaaaggaaaaatga-acaaagatga-agaaattacaagcttgtcac- 1281

                                                                        
Query: 77   taggctgctacatgataatatccttgcaaacctaaggcagtccatttannnnnnn-catc 135
            ||||||| ||||||||||||||||||||||| || |||||| | ||||        || |
Sbjct: 1280 taggctgttacatgataatatccttgcaaacatagggcagtgcctttatttttcttcagc 1221

                                                                        
Query: 136  aaagcagaccatccatacataaacaaagcacactgcatgcaagggtacatcagggtactc 195
            |||||| |||||||||||||||| ||||||||||| |    |||||||   || ||||  
Sbjct: 1220 aaagcaaaccatccatacataaataaagcacactgaa----agggtactaaagagtacaa 1165

                                                                        
Query: 196  cttgggtggacttttaaaaaaccgttcacttgtaaacctcgataacacctcgggcaccca 255
            ||||| |  |||||||  |||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1164 cttggataaacttttatgaaaccgttcacttgtagacctcgataacacctcgtgcaccca 1105

                                                                        
Query: 256  gtcttttgacaattttataatcgctgaaccctgctttggtgaataacacatgccagtcac 315
            || | ||||||||||| || ||||| ||||||||||| ||||| | | ||||||||| | 
Sbjct: 1104 gtttcttgacaattttgtagtcgctaaaccctgctttcgtgaagagctcatgccagttat 1045

                               
Query: 316  tttcactacgctgacggcc 334
            ||||||| || ||||||||
Sbjct: 1044 tttcacttcgttgacggcc 1026

>gb|AY103669.1| Zea mays PCO073521 mRNA sequence
          Length = 1503

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 276  tcgctgaaccctgctttggtgaa 298
            |||||||||||||||||||||||
Sbjct: 1069 tcgctgaaccctgctttggtgaa 1047

>gb|AF033496.1|AF033496 Zea mays herbicide safener binding protein (SBP1) mRNA, complete cds
          Length = 1438

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 276  tcgctgaaccctgctttggtgaa 298
            |||||||||||||||||||||||
Sbjct: 1067 tcgctgaaccctgctttggtgaa 1045

>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence
          Length = 215150

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 154   ataaacaaagcacactgcatgc 175
             ||||||||||||||||||||||
Sbjct: 25688 ataaacaaagcacactgcatgc 25709

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 311     gtcactttcactacgctgacg 331
               |||||||||||||||||||||
Sbjct: 1351664 gtcactttcactacgctgacg 1351644

>gb|AC124818.7| Mus musculus chromosome 14, clone RP24-505E8, complete sequence
          Length = 159170

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 24    tattggaaaaggaaatatgatacaa 48
             |||| ||||||||||||||||||||
Sbjct: 49690 tattagaaaaggaaatatgatacaa 49666

>gb|AY372453.1| Uncultured marine proteobacterium ANT32C12 fosmid clone
          Length = 39378

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 21   aattattggaaaaggaaatat 41
            |||||||||||||||||||||
Sbjct: 9763 aattattggaaaaggaaatat 9783

>gb|AY372452.1| Uncultured marine proteobacterium ANT8C10 fosmid clone
          Length = 37903

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    aattattggaaaaggaaatat 41
             |||||||||||||||||||||
Sbjct: 22274 aattattggaaaaggaaatat 22294

>gb|AC159166.4| Atelerix albiventris clone LB4-482N5, complete sequence
          Length = 61580

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    aaatatgatacaaagatgaca 56
             |||||||||||||||||||||
Sbjct: 33950 aaatatgatacaaagatgaca 33970

>gb|AC158982.2| Mus musculus BAC clone RP23-235N21 from chromosome 14, complete sequence
          Length = 208135

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 24     tattggaaaaggaaatatgatacaa 48
              |||| ||||||||||||||||||||
Sbjct: 207329 tattagaaaaggaaatatgatacaa 207305

>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence
          Length = 115074

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 32   aaggaaatatgatacaaagatgacagaaa 60
            |||||||||||||  ||||||||||||||
Sbjct: 1179 aaggaaatatgatctaaagatgacagaaa 1151

>gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete sequence
          Length = 111786

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 32    aaggaaatatgatacaaagatgacagaaa 60
             |||||||||||||  ||||||||||||||
Sbjct: 46750 aaggaaatatgatctaaagatgacagaaa 46778

>ref|XM_480481.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 agcacactgcatgcaagggt 181
           ||||||||||||||||||||
Sbjct: 552 agcacactgcatgcaagggt 533

>gb|AC004037.1| Homo sapiens chromosome 5, BAC clone 64o24, BAC 5001 (LBNL H101),
           complete sequence
          Length = 32424

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  aaaaggaaatatgatacaaa 49
           ||||||||||||||||||||
Sbjct: 546 aaaaggaaatatgatacaaa 527

>gb|AC093360.7| Mus musculus chromosome 3, clone RP23-57F18, complete sequence
          Length = 275076

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   ccttgggtggacttttaaaa 214
             ||||||||||||||||||||
Sbjct: 83616 ccttgggtggacttttaaaa 83635

>emb|CR513781.13| Zebrafish DNA sequence from clone CH211-61A15 in linkage group 15,
              complete sequence
          Length = 158040

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aaagatgacagaaattacaa 66
              ||||||||||||||||||||
Sbjct: 107644 aaagatgacagaaattacaa 107625

>gb|AC164401.4| Mus musculus chromosome 3, clone RP23-447D6, complete sequence
          Length = 214398

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ccttgggtggacttttaaaa 214
             ||||||||||||||||||||
Sbjct: 74549 ccttgggtggacttttaaaa 74530

>emb|Z92543.1|HS271G9 Human DNA sequence from clone RP1-271G9 on chromosome 6q22, complete
             sequence
          Length = 120376

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttaattattggaaaaggaaa 38
             ||||||||||||||||||||
Sbjct: 65117 ttaattattggaaaaggaaa 65136

>emb|AL590397.7| Human DNA sequence from clone RP11-376O21 on chromosome 9 Contains the
             3' end of the PTPRD gene for protein tyrosine phosphatase,
             receptor type, D (HPTP, PTPD, HPTPD), complete sequence
          Length = 168323

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    atattaattattggaaaaggaaat 39
             |||||||||||||||| |||||||
Sbjct: 66621 atattaattattggaataggaaat 66644

>emb|AL445926.5| Human DNA sequence from clone RP11-439I6 on chromosome 9 Contains the 3'
              end of the PTPRD gene for protein tyrosine phosphatase,
              receptor type, D (HPTP, PTPD, HPTPD), complete sequence
          Length = 167253

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     atattaattattggaaaaggaaat 39
              |||||||||||||||| |||||||
Sbjct: 123647 atattaattattggaataggaaat 123670

>gb|AC041039.8| Homo sapiens chromosome 8, clone RP11-273P3, complete sequence
          Length = 159332

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    caaagatgacagaaattacaagct 69
             |||||||||||||||| |||||||
Sbjct: 19726 caaagatgacagaaatgacaagct 19749

>emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 in linkage group 4 Contains
              the gene for a novel protein (zgc:56546), the gene for a
              novel protein similar to the Tctex-1 family, the gene for a
              novel protein similar to vertebrate tubby like protein 4
              (TULP4), the gene for a novel protein similar to vertebrate
              mitochondrial ribosomal protein S10 (MRPS10), the 3' end of
              a novel gene, two novel genes and three CpG islands,
              complete sequence
          Length = 189764

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    tcttttgacaattttataat 276
              ||||||||||||||||||||
Sbjct: 124745 tcttttgacaattttataat 124726

>gb|AC129713.1| Homo sapiens chromosome 5 clone RP11-391B2, complete sequence
          Length = 65846

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  aaaaggaaatatgatacaaa 49
           ||||||||||||||||||||
Sbjct: 339 aaaaggaaatatgatacaaa 320

>gb|AC022721.9| Homo sapiens, clone RP11-191H13, complete sequence
          Length = 164354

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    caaagatgacagaaattacaagct 69
             |||||||||||||||| |||||||
Sbjct: 19977 caaagatgacagaaatgacaagct 19954

>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence
          Length = 216143

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   cttttgacaattttataatc 277
             ||||||||||||||||||||
Sbjct: 48038 cttttgacaattttataatc 48057

>gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, complete sequence
          Length = 191049

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 46     caaagatgacagaaattacaagct 69
              |||||||||||||||| |||||||
Sbjct: 183486 caaagatgacagaaatgacaagct 183463

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 162     agcacactgcatgcaagggt 181
               ||||||||||||||||||||
Sbjct: 5376615 agcacactgcatgcaagggt 5376634

>gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 sequence, complete sequence
          Length = 70116

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aattattggaaaaggaaata 40
             ||||||||||||||||||||
Sbjct: 11508 aattattggaaaaggaaata 11527

>gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M13, complete sequence
          Length = 125764

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aaaaggaaatatgatacaaa 49
             ||||||||||||||||||||
Sbjct: 11658 aaaaggaaatatgatacaaa 11677

>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agcacactgcatgcaagggt 181
             ||||||||||||||||||||
Sbjct: 46426 agcacactgcatgcaagggt 46445

>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 31     aaaggaaatatgatacaaagatga 54
              ||||||| ||||||||||||||||
Sbjct: 875301 aaaggaagtatgatacaaagatga 875278

>emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 in linkage group 4,
             complete sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   tcttttgacaattttataat 276
             ||||||||||||||||||||
Sbjct: 72864 tcttttgacaattttataat 72883

>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence
          Length = 214005

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   tacataaacaaagcacactg 170
             ||||||||||||||||||||
Sbjct: 31022 tacataaacaaagcacactg 31003

>emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chromosome 18, complete
             sequence
          Length = 174264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   cccagtcttttgacaattttataa 275
             ||||||||| ||||||||||||||
Sbjct: 33435 cccagtcttctgacaattttataa 33458

>gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, RP23-233F17, complete
              sequence
          Length = 176773

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    cccagtcttttgacaattttataa 275
              ||||||||| ||||||||||||||
Sbjct: 156054 cccagtcttctgacaattttataa 156077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,361,337
Number of Sequences: 3902068
Number of extensions: 3361337
Number of successful extensions: 64722
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64639
Number of HSP's gapped (non-prelim): 82
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)