ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast14e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_191211.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
2dbj|AK104674.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
3dbj|AK071920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
5dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
6gb|AC083949.3| Homo sapiens BAC clone CTD-2096A9 from 2, complet... 46 0.094
7gb|AC135116.2| Mus musculus BAC clone RP24-316A1 from chromosome... 42 1.5
8gb|AC126681.4| Mus musculus BAC clone RP24-362M8 from chromosome... 42 1.5
9gb|AC166984.7| Mus musculus chromosome 15, clone RP24-359A11, co... 40 5.8
10gb|AC110499.19| Mus musculus chromosome 1, clone RP23-202J6, com... 40 5.8
11ref|NM_001031021.1| Gallus gallus transmembrane protein 68 (TMEM... 40 5.8
12gb|AC157771.8| Mus musculus chromosome 1, clone RP24-287N8, comp... 40 5.8
13gb|BC022917.1| Mus musculus resistance to inhibitors of cholines... 40 5.8
14gb|BC005633.1| Mus musculus resistance to inhibitors of cholines... 40 5.8
15gb|AC117635.6| Mus musculus chromosome 12, clone RP23-203G2, com... 40 5.8
16gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, co... 40 5.8
17ref|NM_053194.3| Mus musculus resistance to inhibitors of cholin... 40 5.8
18emb|Z70688.1|HSN27C5 Human DNA sequence from clone LL22NC03-27C5... 40 5.8
19gb|AC133480.2| Homo sapiens 12 BAC RP11-12K6 (Roswell Park Cance... 40 5.8
20emb|AL132773.14|HSDJ741H3 Human DNA sequence from clone RP4-741H... 40 5.8
21gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, comp... 40 5.8
22emb|AJ720496.1| Gallus gallus mRNA for hypothetical protein, clo... 40 5.8
23gb|AC018921.22| Homo sapiens 12 BAC RP11-956E11 (Roswell Park Ca... 40 5.8
24emb|CR753829.1| Human DNA sequence from clone XX-NCIH2171_14G18,... 40 5.8
25gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-... 40 5.8
26dbj|AK167746.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-... 40 5.8
27dbj|AK165536.1| Mus musculus RCB-0559 K-1 . F1 cDNA, RIKEN full-... 40 5.8
28dbj|AK169367.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 5.8
29emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in ... 40 5.8
30dbj|AK080192.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 5.8
31dbj|AK031466.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 5.8
32gb|AC122297.4| Mus musculus BAC clone RP23-266D1 from chromosome... 40 5.8
33ref|XM_215118.3| PREDICTED: Rattus norvegicus synembryn (Ric8a),... 40 5.8
34gb|AF288813.1|AF288813 Mus musculus synembryn mRNA, complete cds 40 5.8
35gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, com... 40 5.8
36gb|U91327.1|HSU91327 Human chromosome 12p15 BAC clone CIT987SK-9... 40 5.8
37gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1... 40 5.8
38dbj|AP001831.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.8
39gb|AC147968.2| Gallus gallus BAC clone CH261-119F24 from chromos... 40 5.8
40dbj|AP002898.1| Homo sapiens genomic DNA, chromosome 20p, clone:... 40 5.8

>ref|NM_191211.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1215

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                        
Query: 286  cgatgagcgtgacgaacggttggtgctgccctcattgcgatccttcttccgcaaaccttc 345
            |||||| ||||| |||||  |||||||||||||||| ||||| ||||||| ||  || ||
Sbjct: 1200 cgatgaacgtgatgaacgagtggtgctgccctcatttcgatctttcttccacatgccctc 1141

                                                         
Query: 346  gaagctcaggaaacacttcagaggtctgaccttccaacggtttct 390
             ||||||||||| || || |||||| | |||||||||||||||||
Sbjct: 1140 aaagctcaggaagcatttgagaggtttcaccttccaacggtttct 1096



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>dbj|AK104674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B05, full
            insert sequence
          Length = 1743

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                        
Query: 286  cgatgagcgtgacgaacggttggtgctgccctcattgcgatccttcttccgcaaaccttc 345
            |||||| ||||| |||||  |||||||||||||||| ||||| ||||||| ||  || ||
Sbjct: 1524 cgatgaacgtgatgaacgagtggtgctgccctcatttcgatctttcttccacatgccctc 1465

                                                         
Query: 346  gaagctcaggaaacacttcagaggtctgaccttccaacggtttct 390
             ||||||||||| || || |||||| | |||||||||||||||||
Sbjct: 1464 aaagctcaggaagcatttgagaggtttcaccttccaacggtttct 1420



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>dbj|AK071920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072M02, full
            insert sequence
          Length = 1752

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                        
Query: 286  cgatgagcgtgacgaacggttggtgctgccctcattgcgatccttcttccgcaaaccttc 345
            |||||| ||||| |||||  |||||||||||||||| ||||| ||||||| ||  || ||
Sbjct: 1535 cgatgaacgtgatgaacgagtggtgctgccctcatttcgatctttcttccacatgccctc 1476

                                                         
Query: 346  gaagctcaggaaacacttcagaggtctgaccttccaacggtttct 390
             ||||||||||| || || |||||| | |||||||||||||||||
Sbjct: 1475 aaagctcaggaagcatttgagaggtttcaccttccaacggtttct 1431



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                            
Query: 286      cgatgagcgtgacgaacggttggtgctgccctcattgcgatccttcttccgcaaaccttc 345
                |||||| ||||| |||||  |||||||||||||||| ||||| ||||||| ||  || ||
Sbjct: 31326805 cgatgaacgtgatgaacgagtggtgctgccctcatttcgatctttcttccacatgccctc 31326864

                                         
Query: 346      gaagctcaggaaacacttcagaggt 370
                 ||||||||||| || || ||||||
Sbjct: 31326865 aaagctcaggaagcatttgagaggt 31326889



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>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0481E12
          Length = 161563

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 286   cgatgagcgtgacgaacggttggtgctgccctcattgcgatccttcttccgcaaaccttc 345
             |||||| ||||| |||||  |||||||||||||||| ||||| ||||||| ||  || ||
Sbjct: 81088 cgatgaacgtgatgaacgagtggtgctgccctcatttcgatctttcttccacatgccctc 81147

                                      
Query: 346   gaagctcaggaaacacttcagaggt 370
              ||||||||||| || || ||||||
Sbjct: 81148 aaagctcaggaagcatttgagaggt 81172



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>gb|AC083949.3| Homo sapiens BAC clone CTD-2096A9 from 2, complete sequence
          Length = 109296

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 165   catgccattcttctgagagagaa 187
             |||||||||||||||||||||||
Sbjct: 78448 catgccattcttctgagagagaa 78426



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>gb|AC135116.2| Mus musculus BAC clone RP24-316A1 from chromosome 5, complete sequence
          Length = 138444

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   atttagacacacaaagataat 207
             |||||||||||||||||||||
Sbjct: 26019 atttagacacacaaagataat 25999



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>gb|AC126681.4| Mus musculus BAC clone RP24-362M8 from chromosome 5, complete sequence
          Length = 153715

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 187    atttagacacacaaagataat 207
              |||||||||||||||||||||
Sbjct: 126816 atttagacacacaaagataat 126796



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>gb|AC166984.7| Mus musculus chromosome 15, clone RP24-359A11, complete sequence
          Length = 167492

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    gccaaatgaaatcaacaacc 268
              ||||||||||||||||||||
Sbjct: 113066 gccaaatgaaatcaacaacc 113047



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>gb|AC110499.19| Mus musculus chromosome 1, clone RP23-202J6, complete sequence
          Length = 212282

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   ttagcatgccattcttctga 180
             ||||||||||||||||||||
Sbjct: 49062 ttagcatgccattcttctga 49043



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>ref|NM_001031021.1| Gallus gallus transmembrane protein 68 (TMEM68), mRNA
          Length = 3298

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  tgatcagcagggaagtaaca 160
            ||||||||||||||||||||
Sbjct: 1739 tgatcagcagggaagtaaca 1720



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>gb|AC157771.8| Mus musculus chromosome 1, clone RP24-287N8, complete sequence
          Length = 189621

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   ttagcatgccattcttctga 180
             ||||||||||||||||||||
Sbjct: 88744 ttagcatgccattcttctga 88725



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>gb|BC022917.1| Mus musculus resistance to inhibitors of cholinesterase 8 homolog (C.
            elegans), mRNA (cDNA clone MGC:27540 IMAGE:4460521),
            complete cds
          Length = 2371

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1848 catttccacaagtgaagttg 1867



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>gb|BC005633.1| Mus musculus resistance to inhibitors of cholinesterase 8 homolog (C.
            elegans), mRNA (cDNA clone IMAGE:3156151), complete cds
          Length = 2185

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1643 catttccacaagtgaagttg 1662



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>gb|AC117635.6| Mus musculus chromosome 12, clone RP23-203G2, complete sequence
          Length = 270063

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    acaaatctgtacatgaattc 98
             ||||||||||||||||||||
Sbjct: 37513 acaaatctgtacatgaattc 37532



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>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence
          Length = 211926

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    caaaagcaaactataaaaca 72
             ||||||||||||||||||||
Sbjct: 70748 caaaagcaaactataaaaca 70729



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>ref|NM_053194.3| Mus musculus resistance to inhibitors of cholinesterase 8 homolog (C.
            elegans) (Ric8), mRNA
          Length = 2967

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1871 catttccacaagtgaagttg 1890



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>emb|Z70688.1|HSN27C5 Human DNA sequence from clone LL22NC03-27C5 on chromosome 22, complete
             sequence
          Length = 41375

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    caaaagcaaactataaaaca 72
             ||||||||||||||||||||
Sbjct: 36165 caaaagcaaactataaaaca 36146



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>gb|AC133480.2| Homo sapiens 12 BAC RP11-12K6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128301

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   aagtaacattagcatgccat 172
             ||||||||||||||||||||
Sbjct: 65253 aagtaacattagcatgccat 65234



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>emb|AL132773.14|HSDJ741H3 Human DNA sequence from clone RP4-741H3 on chromosome 20 Contains the
             3' end of the ATRN gene for attractin (with
             dipeptidylpeptidase IV activity) (KIAA0548), ESTs, STSs
             and GSSs, complete sequence
          Length = 104907

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 48    atcaccaaaagcaaactataaaacagaa 75
             |||||| |||| ||||||||||||||||
Sbjct: 46372 atcacccaaagaaaactataaaacagaa 46345



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>gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, complete sequence
          Length = 152934

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    catttccacaagtgaagttg 40
             ||||||||||||||||||||
Sbjct: 40956 catttccacaagtgaagttg 40975



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>emb|AJ720496.1| Gallus gallus mRNA for hypothetical protein, clone 19b17
          Length = 3298

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  tgatcagcagggaagtaaca 160
            ||||||||||||||||||||
Sbjct: 1739 tgatcagcagggaagtaaca 1720



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>gb|AC018921.22| Homo sapiens 12 BAC RP11-956E11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188666

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     agaagagacaaatctgtaca 91
              ||||||||||||||||||||
Sbjct: 103298 agaagagacaaatctgtaca 103279



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>emb|CR753829.1| Human DNA sequence from clone XX-NCIH2171_14G18, complete sequence
          Length = 111550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   attcttctgagagagaattt 190
             ||||||||||||||||||||
Sbjct: 33282 attcttctgagagagaattt 33263



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>gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-336B1, complete sequence
          Length = 218476

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    gccaaatgaaatcaacaacc 268
              ||||||||||||||||||||
Sbjct: 196877 gccaaatgaaatcaacaacc 196896



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>dbj|AK167746.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched
            library, clone:I730005F12 product:Synembryn, full insert
            sequence
          Length = 2381

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1874 catttccacaagtgaagttg 1893



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>dbj|AK165536.1| Mus musculus RCB-0559 K-1 . F1 cDNA, RIKEN full-length enriched
            library, clone:G430001A09 product:Synembryn, full insert
            sequence
          Length = 2355

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1848 catttccacaagtgaagttg 1867



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>dbj|AK169367.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:I920192M15 product:Synembryn, full insert sequence
          Length = 2342

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1835 catttccacaagtgaagttg 1854



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>emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in linkage group 7,
            complete sequence
          Length = 181415

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 52   ccaaaagcaaactataaaacagaagaga 79
            ||||||||||| ||| ||||||||||||
Sbjct: 8441 ccaaaagcaaaatatcaaacagaagaga 8468



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>dbj|AK080192.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530079A14 product:synembryn,
            full insert sequence
          Length = 2034

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1814 catttccacaagtgaagttg 1833



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>dbj|AK031466.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030437B01 product:synembryn,
            full insert sequence
          Length = 2914

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1818 catttccacaagtgaagttg 1837



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>gb|AC122297.4| Mus musculus BAC clone RP23-266D1 from chromosome 6, complete sequence
          Length = 170005

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   agctcaggaaacacttcaga 367
             ||||||||||||||||||||
Sbjct: 80876 agctcaggaaacacttcaga 80857



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>ref|XM_215118.3| PREDICTED: Rattus norvegicus synembryn (Ric8a), mRNA
          Length = 2389

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1879 catttccacaagtgaagttg 1898



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>gb|AF288813.1|AF288813 Mus musculus synembryn mRNA, complete cds
          Length = 2377

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   catttccacaagtgaagttg 40
            ||||||||||||||||||||
Sbjct: 1870 catttccacaagtgaagttg 1889



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>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence
          Length = 228068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    catttccacaagtgaagttg 40
             ||||||||||||||||||||
Sbjct: 62237 catttccacaagtgaagttg 62218



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>gb|U91327.1|HSU91327 Human chromosome 12p15 BAC clone CIT987SK-99D8 complete sequence
          Length = 129252

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    agaagagacaaatctgtaca 91
             ||||||||||||||||||||
Sbjct: 77931 agaagagacaaatctgtaca 77950



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>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     caaaagcaaactataaaaca 72
              ||||||||||||||||||||
Sbjct: 172979 caaaagcaaactataaaaca 172960



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>dbj|AP001831.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-317J19, complete
              sequence
          Length = 185919

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    attcttctgagagagaattt 190
              ||||||||||||||||||||
Sbjct: 175751 attcttctgagagagaattt 175770



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>gb|AC147968.2| Gallus gallus BAC clone CH261-119F24 from chromosome unknown, complete
              sequence
          Length = 209917

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     tctgtacatgaattccttga 103
              ||||||||||||||||||||
Sbjct: 193503 tctgtacatgaattccttga 193484



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>dbj|AP002898.1| Homo sapiens genomic DNA, chromosome 20p, clone:13N6, complete sequence
          Length = 206647

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 48    atcaccaaaagcaaactataaaacagaa 75
             |||||| |||| ||||||||||||||||
Sbjct: 70989 atcacccaaagaaaactataaaacagaa 70962


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,704,616
Number of Sequences: 3902068
Number of extensions: 3704616
Number of successful extensions: 71566
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71477
Number of HSP's gapped (non-prelim): 89
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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