>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  113 bits (57), Expect = 4e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                            
Query: 249      attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
                ||||||||||||| || |||||||| |||| ||| |||| ||||||||||||||||| ||
Sbjct: 27264831 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggtgccgaagacggcga 27264772

                                                                            
Query: 309      gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
                ||  ||||||||||| ||| || |||||||||||||| ||||||| ||||  ||||||||
Sbjct: 27264771 gcgagaggccgagcaggacgagcaggacgtcgctgagcaccccggaccaggacatctcgg 27264712

                 
Query: 369      c 369
                |
Sbjct: 27264711 c 27264711



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 5        ctgtcgtagcaaaaccatacagatttctccatgcc 39
                ||||||| |||||||||||||||||||||||||||
Sbjct: 27265099 ctgtcgttgcaaaaccatacagatttctccatgcc 27265065

>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0684A08
          Length = 137841

 Score =  113 bits (57), Expect = 4e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                          
Query: 249    attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
              ||||||||||||| || |||||||| |||| ||| |||| ||||||||||||||||| ||
Sbjct: 115502 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggtgccgaagacggcga 115443

                                                                          
Query: 309    gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
              ||  ||||||||||| ||| || |||||||||||||| ||||||| ||||  ||||||||
Sbjct: 115442 gcgagaggccgagcaggacgagcaggacgtcgctgagcaccccggaccaggacatctcgg 115383

               
Query: 369    c 369
              |
Sbjct: 115382 c 115382



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 5      ctgtcgtagcaaaaccatacagatttctccatgcc 39
              ||||||| |||||||||||||||||||||||||||
Sbjct: 115770 ctgtcgttgcaaaaccatacagatttctccatgcc 115736

>dbj|AK100650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D06, full
            insert sequence
          Length = 2089

 Score =  113 bits (57), Expect = 4e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                        
Query: 249  attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
            ||||||||||||| || |||||||| |||| ||| |||| ||||||||||||||||| ||
Sbjct: 1493 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggtgccgaagacggcga 1434

                                                                        
Query: 309  gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
            ||  ||||||||||| ||| || |||||||||||||| ||||||| ||||  ||||||||
Sbjct: 1433 gcgagaggccgagcaggacgagcaggacgtcgctgagcaccccggaccaggacatctcgg 1374

             
Query: 369  c 369
            |
Sbjct: 1373 c 1373



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 5    ctgtcgtagcaaaaccatacagatttctccatgcc 39
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1761 ctgtcgttgcaaaaccatacagatttctccatgcc 1727

>dbj|AK100585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B08, full
            insert sequence
          Length = 2977

 Score =  113 bits (57), Expect = 4e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                        
Query: 249  attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
            ||||||||||||| || |||||||| |||| ||| |||| ||||||||||||||||| ||
Sbjct: 2554 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggtgccgaagacggcga 2495

                                                                        
Query: 309  gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
            ||  ||||||||||| ||| || |||||||||||||| ||||||| ||||  ||||||||
Sbjct: 2494 gcgagaggccgagcaggacgagcaggacgtcgctgagcaccccggaccaggacatctcgg 2435

             
Query: 369  c 369
            |
Sbjct: 2434 c 2434



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 5    ctgtcgtagcaaaaccatacagatttctccatgcc 39
            ||||||| |||||||||||||||||||||||||||
Sbjct: 2822 ctgtcgttgcaaaaccatacagatttctccatgcc 2788

>dbj|AK061743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F02, full
            insert sequence
          Length = 1756

 Score =  113 bits (57), Expect = 4e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                        
Query: 249  attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
            ||||||||||||| || |||||||| |||| ||| |||| ||||||||||||||||| ||
Sbjct: 1496 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggtgccgaagacggcga 1437

                                                                        
Query: 309  gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
            ||  ||||||||||| ||| || |||||||||||||| ||||||| ||||  ||||||||
Sbjct: 1436 gcgagaggccgagcaggacgagcaggacgtcgctgagcaccccggaccaggacatctcgg 1377

             
Query: 369  c 369
            |
Sbjct: 1376 c 1376



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 13   gcaaaaccatacagatttctccatgcc 39
            |||||||||||||||||||||||||||
Sbjct: 1756 gcaaaaccatacagatttctccatgcc 1730

>dbj|AK061649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C02, full
            insert sequence
          Length = 1697

 Score =  113 bits (57), Expect = 4e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                        
Query: 249  attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
            ||||||||||||| || |||||||| |||| ||| |||| ||||||||||||||||| ||
Sbjct: 1119 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggtgccgaagacggcga 1060

                                                                        
Query: 309  gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
            ||  ||||||||||| ||| || |||||||||||||| ||||||| ||||  ||||||||
Sbjct: 1059 gcgagaggccgagcaggacgagcaggacgtcgctgagcaccccggaccaggacatctcgg 1000

             
Query: 369  c 369
            |
Sbjct: 999  c 999



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 5    ctgtcgtagcaaaaccatacagatttctccatgcc 39
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1387 ctgtcgttgcaaaaccatacagatttctccatgcc 1353

>dbj|AK119517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C05, full
            insert sequence
          Length = 2055

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 249  attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
            ||||||||||||| || |||||||| |||| ||| |||| ||||| ||||||||||| ||
Sbjct: 1496 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggcgccgaagacggcga 1437

                                                                        
Query: 309  gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
            ||  ||||||||||| ||| || |||||||||||||| ||||||| ||||  ||||||||
Sbjct: 1436 gcgagaggccgagcaggacgagcaggacgtcgctgagcaccccggaccaggacatctcgg 1377

             
Query: 369  c 369
            |
Sbjct: 1376 c 1376



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 5    ctgtcgtagcaaaaccatacagatttctccatgcc 39
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1764 ctgtcgttgcaaaaccatacagatttctccatgcc 1730

>dbj|AK064827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F07, full
            insert sequence
          Length = 1984

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 103/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 249  attaagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggaga 308
            ||||||||||||| || |||||||| |||| ||| |||| ||||||||||||||||| ||
Sbjct: 1492 attaagcgctggaggaatggaagatctgcagcagggacgtgtaggtgccgaagacggcga 1433

                                                                        
Query: 309  gcacgaggccgagcacgaccaggaggacgtcgctgagaaccccggcccagcccatctcgg 368
            ||  ||||||||||| ||| || |||||||| ||| | ||||||| ||||  ||||||||
Sbjct: 1432 gcgagaggccgagcaggacgagcaggacgtcactgggcaccccggaccaggacatctcgg 1373

             
Query: 369  c 369
            |
Sbjct: 1372 c 1372



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 5    ctgtcgtagcaaaaccatacagatttctccatgcc 39
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1760 ctgtcgttgcaaaaccatacagatttctccatgcc 1726

>gb|AY109638.1| Zea mays CL25119_1 mRNA sequence
          Length = 1009

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                       
Query: 252 aagcgctggaagagtggaagatttgcaccagcgacgagtaggtgccgaagacggagagca 311
           ||||||| || || ||||||||||||| |||||||| ||| || ||||| |||| |||| 
Sbjct: 217 aagcgcttgacgattggaagatttgcagcagcgacgtgtacgtcccgaacacggcgagcg 276

                                    
Query: 312 cgaggccgagcacgaccaggaggac 336
           ||||||||| ||||| ||| |||||
Sbjct: 277 cgaggccgatcacgagcagcaggac 301

>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 346    aaccccggcccagcccatctcggc 369
              ||||||||||||||||||||||||
Sbjct: 248336 aaccccggcccagcccatctcggc 248313

>gb|AC021200.7| Homo sapiens BAC clone RP11-62B4 from 4, complete sequence
          Length = 154690

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 206    gagccaatgcacccagcaattta 228
              |||||||||||||||||||||||
Sbjct: 124491 gagccaatgcacccagcaattta 124469

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 347     accccggcccagcccatctcggc 369
               |||||||||||||||||||||||
Sbjct: 3011233 accccggcccagcccatctcggc 3011255

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 344     agaaccccggcccagcccatctcggc 369
               ||||||||||||||||||||| ||||
Sbjct: 2098683 agaaccccggcccagcccatcgcggc 2098708

>emb|BX890604.9| Human DNA sequence from clone RP11-706O15 on chromosome X, complete
              sequence
          Length = 192469

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 103    agatcaacaaatagctgagcca 124
              ||||||||||||||||||||||
Sbjct: 176274 agatcaacaaatagctgagcca 176253

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 316     gccgagcacgaccaggaggacgtcgc 341
               ||||||||||||||||| ||||||||
Sbjct: 1884518 gccgagcacgaccaggacgacgtcgc 1884493

>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds
          Length = 1209

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 24 cagatttctccatgcctccaa 44
          |||||||||||||||||||||
Sbjct: 82 cagatttctccatgcctccaa 62

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 279    ccagcgacgagtaggtgccga 299
              |||||||||||||||||||||
Sbjct: 125026 ccagcgacgagtaggtgccga 125006

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 305     gagagcacgaggccgagcacg 325
               |||||||||||||||||||||
Sbjct: 1514101 gagagcacgaggccgagcacg 1514121

>gb|DQ213889.1| Taeniopygia guttata clone 0058P0051B11 stem cell antigen 2 variant
           2-like mRNA, complete sequence
          Length = 887

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 gccgagcacgaccaggagga 335
           ||||||||||||||||||||
Sbjct: 118 gccgagcacgaccaggagga 99

>gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete sequence
          Length = 185417

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   gccaatgcacccagcaattt 227
             ||||||||||||||||||||
Sbjct: 77546 gccaatgcacccagcaattt 77565

>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02,
              complete sequence
          Length = 157106

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 304    ggagagcacgaggccgagcacgac 327
              ||||||| ||||||||||||||||
Sbjct: 143651 ggagagcgcgaggccgagcacgac 143674

>gb|AC183100.3| Pan troglodytes BAC clone CH251-736D14 from chromosome 16, complete
             sequence
          Length = 173550

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   agcaattcctctctgatccg 144
             ||||||||||||||||||||
Sbjct: 49524 agcaattcctctctgatccg 49543

>gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone
             BACR04A24, complete sequence
          Length = 166677

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   gccaatgcacccagcaattt 227
             ||||||||||||||||||||
Sbjct: 82976 gccaatgcacccagcaattt 82995

>ref|NM_057981.3| Drosophila melanogaster ebi CG4063-RA (ebi), mRNA
          Length = 3325

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  gccaatgcacccagcaattt 227
            ||||||||||||||||||||
Sbjct: 1768 gccaatgcacccagcaattt 1787

>gb|AY061326.1| Drosophila melanogaster LD24373 full length cDNA
          Length = 3310

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  gccaatgcacccagcaattt 227
            ||||||||||||||||||||
Sbjct: 1735 gccaatgcacccagcaattt 1754

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    ccggcccagcccatctcggc 369
              ||||||||||||||||||||
Sbjct: 564804 ccggcccagcccatctcggc 564823

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 304      ggagagcacgaggccgagcacgac 327
                ||||||| ||||||||||||||||
Sbjct: 27913234 ggagagcgcgaggccgagcacgac 27913257

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 304      ggagagcacgaggccgagcacgac 327
                ||||||| ||||||||||||||||
Sbjct: 27214563 ggagagcgcgaggccgagcacgac 27214540

>gb|AC009021.8| Homo sapiens chromosome 16 clone RP11-105C19, complete sequence
          Length = 176219

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    agcaattcctctctgatccg 144
              ||||||||||||||||||||
Sbjct: 132646 agcaattcctctctgatccg 132665

>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0003E08
          Length = 135014

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    ggagagcacgaggccgagcacgac 327
              ||||||| ||||||||||||||||
Sbjct: 122241 ggagagcgcgaggccgagcacgac 122218

>emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome
          Length = 9979

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   cctccaatcaactagtagta 57
            ||||||||||||||||||||
Sbjct: 3969 cctccaatcaactagtagta 3988

>gb|AF146345.1|AF146345 Drosophila melanogaster Ebi mRNA, complete cds
          Length = 3349

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  gccaatgcacccagcaattt 227
            ||||||||||||||||||||
Sbjct: 1766 gccaatgcacccagcaattt 1785

>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete
              sequence
          Length = 306076

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gccaatgcacccagcaattt 227
              ||||||||||||||||||||
Sbjct: 111139 gccaatgcacccagcaattt 111158

>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054
             (D135)), complete sequence
          Length = 81053

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   gccaatgcacccagcaattt 227
             ||||||||||||||||||||
Sbjct: 56365 gccaatgcacccagcaattt 56384


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,431,618
Number of Sequences: 3902068
Number of extensions: 2431618
Number of successful extensions: 44979
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44733
Number of HSP's gapped (non-prelim): 246
length of query: 370
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 348
effective length of database: 17,147,199,772
effective search space: 5967225520656
effective search space used: 5967225520656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)