>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 352      gatcagccgcacaccgtcttgaggatcctcttggcctcttgttcgccgtgcctaagcgtg 411
                |||||| |||||||||||||||||| | || ||||| | |  ||||||| ||| | || |
Sbjct: 31246154 gatcaggcgcacaccgtcttgaggaccttcctggccccctcctcgccgtacctcaccgcg 31246213

                                     
Query: 412      gcgagccggcacgactgctcc 432
                |||||||||||||||||||||
Sbjct: 31246214 gcgagccggcacgactgctcc 31246234



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 162      caaaggtcaagggcacgtacaa 183
                ||||||||||||||||||||||
Sbjct: 31245852 caaaggtcaagggcacgtacaa 31245873

>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0014K08
          Length = 177263

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                          
Query: 352    gatcagccgcacaccgtcttgaggatcctcttggcctcttgttcgccgtgcctaagcgtg 411
              |||||| |||||||||||||||||| | || ||||| | |  ||||||| ||| | || |
Sbjct: 172499 gatcaggcgcacaccgtcttgaggaccttcctggccccctcctcgccgtacctcaccgcg 172558

                                   
Query: 412    gcgagccggcacgactgctcc 432
              |||||||||||||||||||||
Sbjct: 172559 gcgagccggcacgactgctcc 172579



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 162    caaaggtcaagggcacgtacaa 183
              ||||||||||||||||||||||
Sbjct: 172197 caaaggtcaagggcacgtacaa 172218

>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0481E12
          Length = 161563

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                       
Query: 352 gatcagccgcacaccgtcttgaggatcctcttggcctcttgttcgccgtgcctaagcgtg 411
           |||||| |||||||||||||||||| | || ||||| | |  ||||||| ||| | || |
Sbjct: 437 gatcaggcgcacaccgtcttgaggaccttcctggccccctcctcgccgtacctcaccgcg 496

                                
Query: 412 gcgagccggcacgactgctcc 432
           |||||||||||||||||||||
Sbjct: 497 gcgagccggcacgactgctcc 517



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 162 caaaggtcaagggcacgtacaa 183
           ||||||||||||||||||||||
Sbjct: 135 caaaggtcaagggcacgtacaa 156

>ref|NM_191189.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1338

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                        
Query: 354  tcagccgcacaccgtcttgaggatcctcttggcctcttgttcgccgtgcctaagcgtggc 413
            |||| |||||||||||||||||| | || ||||| | |  ||||||| ||| | || |||
Sbjct: 1338 tcaggcgcacaccgtcttgaggaccttcctggccccctcctcgccgtacctcaccgcggc 1279

                               
Query: 414  gagccggcacgactgctcc 432
            |||||||||||||||||||
Sbjct: 1278 gagccggcacgactgctcc 1260

>gb|AC131108.3| Mus musculus BAC clone RP23-351K24 from chromosome 16, complete
             sequence
          Length = 175409

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 59    cttatgcaggcatagaaatatctctt 84
             |||||||||||||||||||| |||||
Sbjct: 54593 cttatgcaggcatagaaatagctctt 54568

>gb|AC117217.2| Mus musculus BAC clone RP23-318C3 from 17, complete sequence
          Length = 199711

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    aatgacaacaccaaaggtcaa 171
              |||||||||||||||||||||
Sbjct: 122715 aatgacaacaccaaaggtcaa 122735

>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome
          Length = 221454

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 243    cgtcggcgccgagcacacagc 263
              |||||||||||||||||||||
Sbjct: 218216 cgtcggcgccgagcacacagc 218196

>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome
          Length = 215678

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 243    cgtcggcgccgagcacacagc 263
              |||||||||||||||||||||
Sbjct: 212430 cgtcggcgccgagcacacagc 212410

>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09,
              complete sequence
          Length = 171861

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    gtacaagtacaacaacacag 197
              ||||||||||||||||||||
Sbjct: 151079 gtacaagtacaacaacacag 151060

>gb|AC175459.3| Mus musculus BAC clone RP24-110P17 from chromosome y, complete sequence
          Length = 166872

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aacatgcctacatttttctt 55
             ||||||||||||||||||||
Sbjct: 43273 aacatgcctacatttttctt 43292

>gb|AC007255.4| Homo sapiens BAC clone RP11-550A18 from 7, complete sequence
          Length = 157092

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  cagcaaggaaaatacagaga 214
            ||||||||||||||||||||
Sbjct: 9486 cagcaaggaaaatacagaga 9505

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    gccgacgtcggcgccgagca 257
              ||||||||||||||||||||
Sbjct: 289954 gccgacgtcggcgccgagca 289935

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 178      gtacaagtacaacaacacag 197
                ||||||||||||||||||||
Sbjct: 15741398 gtacaagtacaacaacacag 15741379

>gb|AC145987.2| Pan troglodytes BAC clone RP43-165D6 from chromosome 7, complete sequence
          Length = 158415

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    cagcaaggaaaatacagaga 214
              ||||||||||||||||||||
Sbjct: 136112 cagcaaggaaaatacagaga 136131

>gb|AC110075.4| Homo sapiens BAC clone RP11-258L23 from 2, complete sequence
          Length = 12267

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  aaggaaaatacagagacagt 218
            ||||||||||||||||||||
Sbjct: 7897 aaggaaaatacagagacagt 7878

>gb|AF204167.1|AF204167 Macaca nemestrina rhadinovirus 2 DNA polymerase and ORF 10-like
           protein genes, partial cds
          Length = 2708

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 366 cgtcttgaggatcctcttgg 385
           ||||||||||||||||||||
Sbjct: 141 cgtcttgaggatcctcttgg 122

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 178      gtacaagtacaacaacacag 197
                ||||||||||||||||||||
Sbjct: 15828775 gtacaagtacaacaacacag 15828756


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,072,875
Number of Sequences: 3902068
Number of extensions: 3072875
Number of successful extensions: 56556
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56389
Number of HSP's gapped (non-prelim): 167
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)