>RK4_ARATH (O50061) 50S ribosomal protein L4, chloroplast precursor (R-protein|
           L4)
          Length = 282

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -1

Query: 383 MLTPRTLNLYDILDARKHFFTPAAIEYLNSRYG 285
           MLTPRTLNL+DIL+A K   TPAA+E+LN+RYG
Sbjct: 230 MLTPRTLNLFDILNADKLVLTPAAVEFLNARYG 262

>RK4_TOBAC (O80361) 50S ribosomal protein L4, chloroplast precursor (R-protein|
           L4)
          Length = 282

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = -1

Query: 383 MLTPRTLNLYDILDARKHFFTPAAIEYLNSRYG 285
           MLTPRTLNL+DILD+ K   T +A+++LN RYG
Sbjct: 221 MLTPRTLNLFDILDSEKLVLTKSAVDFLNERYG 253

>RK4_SPIOL (O49937) 50S ribosomal protein L4, chloroplast precursor (R-protein|
           L4)
          Length = 293

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -1

Query: 383 MLTPRTLNLYDILDARKHFFTPAAIEYLNSRYG 285
           +LTPR+LNL+D+L+A K  FT   I+YLN RYG
Sbjct: 228 LLTPRSLNLFDVLNAEKLVFTEGTIQYLNQRYG 260

>VU47_HHV6U (Q06093) Glycoprotein U47 precursor|
          Length = 651

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 361 TCTTSSTHASISSPRLPLNTSIRGTVPPVLMNLWAKMARTTV 236
           T T SST AS++SP +P +T+I    PP +     K+   T+
Sbjct: 271 TTTPSSTSASLTSPHIP-STNIPTPAPPPVTKNSTKLHTDTI 311

>OPGH_PSEPK (Q88D04) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)|
          Length = 857

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 118 GITSPMKKPFWFAFIVI*LCMLHTDVILDFQF 23
           G+ S +  P WF F+V+   +L T+ +++ Q+
Sbjct: 519 GVMSYLSAPLWFLFLVLSTALLATNTLMEPQY 550

>RL4_SYNP6 (O24690) 50S ribosomal protein L4|
          Length = 210

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 383 MLTPRTLNLYDILDARKHFFTPAAIEYLNSRYG 285
           ++T   LN++D+L+A +   T AA+E +   YG
Sbjct: 177 LITATNLNIFDLLNADRIVSTSAALEKIQEVYG 209

>VU47_HHV6G (P30005) Glycoprotein U47 precursor|
          Length = 651

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 361 TCTTSSTHASISSPRLPLNTSIRGTVPPVLMN 266
           T T SST AS++SP +P         PPV  N
Sbjct: 271 TTTPSSTSASLTSPHIPSTNIPTPEPPPVTKN 302

>SYL_RICCN (Q92I35) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 835

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 42  TSVCNIHN*ITIKANQKGFFIGEVIPKPTNKKHHNNYL 155
           T V N  N ++++   KG F   ++   T K  HNN+L
Sbjct: 537 TKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWL 574

>OPGH_WIGBR (Q8D3D5) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)|
          Length = 826

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 118 GITSPMKKPFWFAFIVI*LCMLHTDVILDFQFSHIFQIN 2
           G+ S +  P WFAF+++   +    +I + +F   F+IN
Sbjct: 523 GVMSYLSAPLWFAFLILSTIL---QIIYNIEFMCCFKIN 558

>PRDX5_RAT (Q9R063) Peroxiredoxin-5, mitochondrial precursor (EC 1.11.1.15)|
           (Prx-V) (Peroxisomal antioxidant enzyme) (PLP)
           (Thioredoxin reductase) (Thioredoxin peroxidase PMP20)
           (Antioxidant enzyme B166) (AOEB166)
          Length = 213

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 270 IKTGGTVPRIEVFNGSRGEEM 332
           IK G T+P +EVF G  G+++
Sbjct: 55  IKVGDTIPSVEVFEGEPGKKV 75

>RL4_RHOPA (P61068) 50S ribosomal protein L4 (RRP-L4)|
          Length = 206

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 383 MLTPRTLNLYDILDARKHFFTPAAIEYLNSRY 288
           +L  + +N+YDIL  +K   T AA++ L +R+
Sbjct: 174 VLPVQGINVYDILRRKKLVLTKAAVDALEARF 205

>SYL_RICPR (Q9ZDB1) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 828

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 42  TSVCNIHN*ITIKANQKGFFIGEVIPKPTNKKHHNNYL 155
           T + N HN ++I+   KG F   ++   T K  +NN+L
Sbjct: 530 TKLMNEHNYVSIREPFKGLFTQGMVLHATYKDENNNWL 567


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,608,738
Number of Sequences: 219361
Number of extensions: 578884
Number of successful extensions: 1703
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1702
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)