ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast14b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB199220.1| Pongo pygmaeus Popy-T2R48 gene for bitter taste ... 44 0.092
2gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosom... 42 0.36
3gb|AF058440.1|AF058440 Buchnera aphidicola specific-host Uroleuc... 42 0.36
4gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 1.4
5emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 ... 40 1.4
6gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, com... 40 1.4
7ref|XM_725035.1| Plasmodium yoelii yoelii str. 17XNL chaperonin ... 40 1.4
8ref|XM_727541.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 1.4
9gb|CP000001.1| Bacillus cereus E33L, complete genome 40 1.4
10gb|AC166066.6| Mus musculus 10 BAC RP24-285H2 (Roswell Park Canc... 40 1.4
11emb|AL121588.24|HSDJ54G6 Human DNA sequence from clone RP1-54G6 ... 40 1.4
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
13dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
14gb|AY724972.1| Pongo pygmaeus chromosome 12 taste receptor T2R48... 40 1.4
15gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 1.4
16gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chrom... 38 5.6
17gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.6
18ref|XM_717169.1| Candida albicans SC5314 hypothetical protein (C... 38 5.6
19ref|XM_717055.1| Candida albicans SC5314 hypothetical protein (C... 38 5.6
20gb|AC087067.3| Rattus norvegicus strain Brown Norway clone RP31-... 38 5.6
21gb|AC087041.2| Rattus norvegicus strain Brown Norway clone RP31-... 38 5.6
22gb|AC151307.2| Xenopus tropicalis clone CH216-61M14, complete se... 38 5.6
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 5.6
24gb|AC100817.5| Homo sapiens chromosome 8, clone RP11-936G2, comp... 38 5.6
25gb|AC124538.4| Mus musculus BAC clone RP23-338P10 from chromosom... 38 5.6
26emb|BX004997.17| Zebrafish DNA sequence from clone DKEY-46E6 in ... 38 5.6
27emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chr... 38 5.6
28gb|AC074263.5| Homo sapiens BAC clone RP11-324M21 from 7, comple... 38 5.6
29gb|AC006016.3| Homo sapiens PAC clone RP5-968I16 from 7, complet... 38 5.6
30gb|AF098992.2| Caenorhabditis elegans cosmid F53C3, complete seq... 38 5.6
31gb|AC150706.4| Medicago truncatula clone mth2-132l18, complete s... 38 5.6
32emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chr... 38 5.6
33emb|BX664724.7| Human DNA sequence from clone RP11-259A5 on chro... 38 5.6
34emb|CR788267.4| Human DNA sequence from clone RP11-120E5 on chro... 38 5.6
35emb|BX649597.2| Human DNA sequence from clone RP11-186G6 on chro... 38 5.6
36emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chr... 38 5.6
37emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chro... 38 5.6
38emb|AL449423.14| Human DNA sequence from clone RP11-149I2 on chr... 38 5.6
39emb|AL359770.12| Human DNA sequence from clone RP11-286B9 on chr... 38 5.6
40emb|AL132767.7|HSJ819L10 Human DNA sequence from clone RP5-819L1... 38 5.6
41emb|AL049562.7|HSDA86H19 Human DNA sequence from clone RP6-86H19... 38 5.6
42emb|AL035563.19|HS1068E13 Human DNA sequence from clone RP5-1068... 38 5.6
43gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Ca... 38 5.6
44gb|AC091913.2| Homo sapiens chromosome 5 clone RP11-216D7, compl... 38 5.6
45gb|AC170742.3| Sorex araneus clone SA_Ba-580J7, complete sequence 38 5.6
46gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete se... 38 5.6
47dbj|AK141991.1| Mus musculus 12 days embryo spinal ganglion cDNA... 38 5.6
48gb|AC103409.2| Homo sapiens chromosome 8, clone RP11-1107H4, com... 38 5.6
49gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Ca... 38 5.6
50gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 38 5.6
51gb|DQ073386.1| Heliocidaris erythrogramma goosecoid (Gsc) mRNA, ... 38 5.6
52gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosom... 38 5.6
53gb|AC000048.4| Homo sapiens Chromosome 9p21 Cosmid Clone c66, co... 38 5.6
54ref|NM_062289.4| Caenorhabditis elegans F53C3.4 (F53C3.4) mRNA, ... 38 5.6
55gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate h... 38 5.6
56dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
57dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
58gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, comp... 38 5.6
59dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
60emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in ... 38 5.6
61gb|AC097472.2| Homo sapiens BAC clone RP11-75M18 from 4, complet... 38 5.6
62gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 38 5.6
63gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, compl... 38 5.6
64gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complet... 38 5.6
65gb|AY569337.1| Pan troglodytes chromosome 10 clone RP43-163C1, c... 38 5.6
66gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568... 38 5.6
67gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 38 5.6
68emb|AL606599.3|OSJN00034 Oryza sativa genomic DNA, chromosome 4,... 38 5.6
69gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Rosw... 38 5.6
70emb|AL607143.14| Mouse DNA sequence from clone RP23-455G15 on ch... 38 5.6
71dbj|D13454.1|YSACACHS3 Candida albicans CACHS3 gene for chitin s... 38 5.6
72dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds 38 5.6 
>dbj|AB199220.1| Pongo pygmaeus Popy-T2R48 gene for bitter taste receptor T2R48,
           partial cds
          Length = 847

 Score = 44.1 bits (22), Expect = 0.092
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 49  tttgacaaattattgcaatcatgtat 74
           |||| |||||||||||||||||||||
Sbjct: 764 tttgccaaattattgcaatcatgtat 789
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>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence
          Length = 205094

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    ttcatattctaaactagtttg 52
             |||||||||||||||||||||
Sbjct: 49257 ttcatattctaaactagtttg 49237
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>gb|AF058440.1|AF058440 Buchnera aphidicola specific-host Uroleucon solidaginis tryptophan
           synthase beta chain (trpB) gene, partial cds
          Length = 679

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 24  aagttattttcatattctaaa 44
           |||||||||||||||||||||
Sbjct: 321 aagttattttcatattctaaa 301
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      tacatttttcataagttatt 114
               ||||||||||||||||||||
Sbjct: 2711988 tacatttttcataagttatt 2712007
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>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23,
             complete sequence
          Length = 178472

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    ggtacagtacatttttcata 107
             ||||||||||||||||||||
Sbjct: 19431 ggtacagtacatttttcata 19450
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>gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, complete sequence
          Length = 177145

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     tcatgtattcttgcaatccc 86
              ||||||||||||||||||||
Sbjct: 148868 tcatgtattcttgcaatccc 148887
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>ref|XM_725035.1| Plasmodium yoelii yoelii str. 17XNL chaperonin (PY02258) partial
           mRNA
          Length = 1669

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  ttttcatattctaaactagt 49
           ||||||||||||||||||||
Sbjct: 734 ttttcatattctaaactagt 715
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>ref|XM_727541.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000439.00.0)
           partial mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  ttttcatattctaaactagt 49
           ||||||||||||||||||||
Sbjct: 524 ttttcatattctaaactagt 505
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      tacatttttcataagttatt 114
               ||||||||||||||||||||
Sbjct: 2734428 tacatttttcataagttatt 2734447
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>gb|AC166066.6| Mus musculus 10 BAC RP24-285H2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 173920

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    tcatgtattcttgcaatccc 86
             ||||||||||||||||||||
Sbjct: 19815 tcatgtattcttgcaatccc 19834
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>emb|AL121588.24|HSDJ54G6 Human DNA sequence from clone RP1-54G6 on chromosome 20 Contains an
             autophagy Apg3p/Aut1p-like (APG3) pseudogene, complete
             sequence
          Length = 84871

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    agttattttcatattctaaa 44
             ||||||||||||||||||||
Sbjct: 64877 agttattttcatattctaaa 64896
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 27      ttattttcatattctaaactagtttgac 54
               |||||||| ||| |||||||||||||||
Sbjct: 6257306 ttattttcgtatactaaactagtttgac 6257333
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>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1267_F10
          Length = 162669

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 27    ttattttcatattctaaactagtttgac 54
             |||||||| ||| |||||||||||||||
Sbjct: 54693 ttattttcgtatactaaactagtttgac 54720
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>gb|AY724972.1| Pongo pygmaeus chromosome 12 taste receptor T2R48 gene, complete
           cds
          Length = 957

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 49  tttgacaaattattgcaatcatgtat 74
           |||| |||||| ||||||||||||||
Sbjct: 845 tttgccaaattrttgcaatcatgtat 870
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      tacatttttcataagttatt 114
               ||||||||||||||||||||
Sbjct: 2751992 tacatttttcataagttatt 2752011
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>gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chromosome 9, complete
              sequence
          Length = 169499

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 98     atttttcataagttattgg 116
              |||||||||||||||||||
Sbjct: 114694 atttttcataagttattgg 114712
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>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009C07, complete sequence
          Length = 148731

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    ttattttcatattctaaac 45
             |||||||||||||||||||
Sbjct: 75289 ttattttcatattctaaac 75307
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>ref|XM_717169.1| Candida albicans SC5314 hypothetical protein (CaO19_12403), mRNA
          Length = 3336

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 31   tttcatattctaaactagt 49
            |||||||||||||||||||
Sbjct: 2161 tttcatattctaaactagt 2143
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>ref|XM_717055.1| Candida albicans SC5314 hypothetical protein (CaO19_4937), mRNA
          Length = 3336

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 31   tttcatattctaaactagt 49
            |||||||||||||||||||
Sbjct: 2161 tttcatattctaaactagt 2143
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>gb|AC087067.3| Rattus norvegicus strain Brown Norway clone RP31-40H10, complete
             sequence
          Length = 178746

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    taaactagtttgacaaatt 59
             |||||||||||||||||||
Sbjct: 27818 taaactagtttgacaaatt 27800
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>gb|AC087041.2| Rattus norvegicus strain Brown Norway clone RP31-188L2, complete sequence
          Length = 123260

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     taaactagtttgacaaatt 59
              |||||||||||||||||||
Sbjct: 106731 taaactagtttgacaaatt 106713
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>gb|AC151307.2| Xenopus tropicalis clone CH216-61M14, complete sequence
          Length = 164963

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    tacagtacatttttcataa 108
             |||||||||||||||||||
Sbjct: 13010 tacagtacatttttcataa 12992
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 89      gtacagtacatttttcata 107
               |||||||||||||||||||
Sbjct: 3965437 gtacagtacatttttcata 3965455
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>gb|AC100817.5| Homo sapiens chromosome 8, clone RP11-936G2, complete sequence
          Length = 152388

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 99682 atttttcataagttattgg 99664
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>gb|AC124538.4| Mus musculus BAC clone RP23-338P10 from chromosome 1, complete sequence
          Length = 181512

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 94     gtacatttttcataagtta 112
              |||||||||||||||||||
Sbjct: 141595 gtacatttttcataagtta 141577
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>emb|BX004997.17| Zebrafish DNA sequence from clone DKEY-46E6 in linkage group 7,
             complete sequence
          Length = 200556

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    tgcaatcatgtattcttgcaatc 84
             |||||| ||||||||||||||||
Sbjct: 85254 tgcaataatgtattcttgcaatc 85276
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>emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chromosome 9, complete
            sequence
          Length = 166687

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 98   atttttcataagttattgg 116
            |||||||||||||||||||
Sbjct: 4674 atttttcataagttattgg 4656
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>gb|AC074263.5| Homo sapiens BAC clone RP11-324M21 from 7, complete sequence
          Length = 65580

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    tattgcaatcatgtattct 77
             |||||||||||||||||||
Sbjct: 60062 tattgcaatcatgtattct 60080
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>gb|AC006016.3| Homo sapiens PAC clone RP5-968I16 from 7, complete sequence
          Length = 160457

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    attttcatattctaaacta 47
             |||||||||||||||||||
Sbjct: 29819 attttcatattctaaacta 29837
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>gb|AF098992.2| Caenorhabditis elegans cosmid F53C3, complete sequence
          Length = 44323

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    caagttattttcatattct 41
             |||||||||||||||||||
Sbjct: 18011 caagttattttcatattct 18029
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>gb|AC150706.4| Medicago truncatula clone mth2-132l18, complete sequence
          Length = 105472

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 26   gttattttcatattctaaa 44
            |||||||||||||||||||
Sbjct: 4310 gttattttcatattctaaa 4328
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>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a
             RAB28, member RAS oncogene family pseudogene (RAB28), a
             pseudogene similar to part of recombining binding protein
             suppressor of hairless (Drosophila) (RBPSUH), two novel
             pseudogenes, a pseudogene similar to part of fibroblast
             growth factor 7 (keratinocyte growth factor) (FGF7), the
             3' end of a novel gene and two CpG islands, complete
             sequence
          Length = 163837

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 16936 atttttcataagttattgg 16918
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>emb|BX664724.7| Human DNA sequence from clone RP11-259A5 on chromosome 9 Contains a
              pseudogene similar to part of ATP synthase, H+
              transporting, mitochondrial F1 complex, alpha subunit,
              isoform 1, cardiac muscle (ATP5A1), a novel pseudogene and
              an FK506 binding protein 4, 59kDa (FKBP4) pseudogene,
              complete sequence
          Length = 174979

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 98     atttttcataagttattgg 116
              |||||||||||||||||||
Sbjct: 115204 atttttcataagttattgg 115186
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>emb|CR788267.4| Human DNA sequence from clone RP11-120E5 on chromosome 9 Contains a
             pseudogene similar to part of recombining binding protein
             suppressor of hairless (Drosophila) (RBPSUH) and a RAB28,
             member RAS oncogene family (RAB28) pseudogene, complete
             sequence
          Length = 156350

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 37193 atttttcataagttattgg 37211
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>emb|BX649597.2| Human DNA sequence from clone RP11-186G6 on chromosome 9 Contains a
             pseudogene similar to part of recombining binding protein
             suppressor of hairless (Drosophila) (RBPSUH), a RAB28,
             member RAS oncogene family (RAB28) pseudogene, a
             pseudogene similar to part of ATP synthase, H+
             transporting, mitochondrial F1 complex, alpha subunit,
             isoform 1, cardiac muscle (ATP5A1), a novel pseudogene and
             a FK506 binding protein 4, 59kDa (FKBP4) pseudogene,
             complete sequence
          Length = 165995

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 31681 atttttcataagttattgg 31699
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>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a
              pseudogene similar to part of fibroblast growth factor 7
              (keratinocyte growth factor) (FGF7), three novel
              pseudogenes, two novel genes, a recombining binding protein
              suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a
              RAB28, member RAS oncogene family (RAB28) pseudogene and
              two CpG islands, complete sequence
          Length = 202891

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 98     atttttcataagttattgg 116
              |||||||||||||||||||
Sbjct: 198683 atttttcataagttattgg 198701
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>emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chromosome 9 Contains two
              novel pseudogenes, two novel genes, a recombining binding
              protein suppressor of hairless (Drosophila) (RBPSUH)
              pseudogene, a RAB28, member RAS oncogene family (RAB28)
              pseudogene and a G protein-coupled receptor, family C,
              group 5,member B (GPRC5B) pseudogene, complete sequence
          Length = 157298

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 98     atttttcataagttattgg 116
              |||||||||||||||||||
Sbjct: 154615 atttttcataagttattgg 154633
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>emb|AL449423.14| Human DNA sequence from clone RP11-149I2 on chromosome 9 Contains the
             CDKN2A gene for cyclin-dependent kinase inhibitor 2A
             (melanoma, p16, inhibits CDK4), the gene for
             susceptibility protein NSG-x (LOC51198), the 5' end of a
             variant of the MTAP gene for methylthioadenosine
             phosphorylase (MSAP), the 3' end of the CDKN2B gene for
             cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
             and 4 CpG islands, complete sequence
          Length = 101155

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 52889 atttttcataagttattgg 52907
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>emb|AL359770.12| Human DNA sequence from clone RP11-286B9 on chromosome 13, complete
             sequence
          Length = 104638

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    gttattttcatattctaaa 44
             |||||||||||||||||||
Sbjct: 82041 gttattttcatattctaaa 82059
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>emb|AL132767.7|HSJ819L10 Human DNA sequence from clone RP5-819L10 on chromosome 6q12-13,
            complete sequence
          Length = 19597

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   gtacagtacatttttcata 107
            |||||||||||||||||||
Sbjct: 8580 gtacagtacatttttcata 8562
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>emb|AL049562.7|HSDA86H19 Human DNA sequence from clone RP6-86H19 on chromosome Xq25-26.2,
             complete sequence
          Length = 91201

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 73626 atttttcataagttattgg 73644
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>emb|AL035563.19|HS1068E13 Human DNA sequence from clone RP5-1068E13 on chromosome 20p11.21-12.3
             Contains a eukaryotic translation elongation factor 1
             alpha 1 (EEF1A1) pseudogene, a novel gene, the C20orf78
             gene for chromosome 20 open reading frame 78 and the
             C20orf79 gene for chromosome 20 open reading frame 79,
             complete sequence
          Length = 148177

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 82096 atttttcataagttattgg 82114
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>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192046

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     tttttcataagttattgga 117
              |||||||||||||||||||
Sbjct: 117100 tttttcataagttattgga 117118
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>gb|AC091913.2| Homo sapiens chromosome 5 clone RP11-216D7, complete sequence
          Length = 90840

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    ttctaaactagtttgacaa 56
             |||||||||||||||||||
Sbjct: 60374 ttctaaactagtttgacaa 60356
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>gb|AC170742.3| Sorex araneus clone SA_Ba-580J7, complete sequence
          Length = 156998

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    ctaaactagtttgacaaat 58
             |||||||||||||||||||
Sbjct: 38716 ctaaactagtttgacaaat 38734
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>gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete sequence
          Length = 206400

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 87    gggtacagtacatttttca 105
             |||||||||||||||||||
Sbjct: 93406 gggtacagtacatttttca 93388
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>dbj|AK141991.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130084E08 product:hypothetical
            protein, full insert sequence
          Length = 2970

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   gtacatttttcataagtta 112
            |||||||||||||||||||
Sbjct: 988  gtacatttttcataagtta 1006
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>gb|AC103409.2| Homo sapiens chromosome 8, clone RP11-1107H4, complete sequence
          Length = 210230

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 98     atttttcataagttattgg 116
              |||||||||||||||||||
Sbjct: 140734 atttttcataagttattgg 140752
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>gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 163469

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 99   tttttcataagttattgga 117
            |||||||||||||||||||
Sbjct: 9708 tttttcataagttattgga 9690
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     gtacagtacatttttcata 107
              |||||||||||||||||||
Sbjct: 133931 gtacagtacatttttcata 133913
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>gb|DQ073386.1| Heliocidaris erythrogramma goosecoid (Gsc) mRNA, complete cds
          Length = 3438

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 54   caaattattgcaatcatgt 72
            |||||||||||||||||||
Sbjct: 2518 caaattattgcaatcatgt 2536
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>gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosome 14, complete sequence
          Length = 216848

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     aagttattttcatattcta 42
              |||||||||||||||||||
Sbjct: 160063 aagttattttcatattcta 160045
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>gb|AC000048.4| Homo sapiens Chromosome 9p21 Cosmid Clone c66, complete sequence
          Length = 34669

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    atttttcataagttattgg 116
             |||||||||||||||||||
Sbjct: 16040 atttttcataagttattgg 16058
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>ref|NM_062289.4| Caenorhabditis elegans F53C3.4 (F53C3.4) mRNA, complete cds
          Length = 910

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 23  caagttattttcatattct 41
           |||||||||||||||||||
Sbjct: 184 caagttattttcatattct 202
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>gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, intron 5,
             partial sequence
          Length = 166617

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    aagttattttcatattcta 42
             |||||||||||||||||||
Sbjct: 59711 aagttattttcatattcta 59693
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 19       caagcaagttattttcata 37
                |||||||||||||||||||
Sbjct: 15296465 caagcaagttattttcata 15296447



 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 19       caagcaagttattttcata 37
                |||||||||||||||||||
Sbjct: 14610752 caagcaagttattttcata 14610734
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 27       ttattttcatattctaaac 45
                |||||||||||||||||||
Sbjct: 28920996 ttattttcatattctaaac 28921014
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>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence
          Length = 188458

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    tttttcataagttattgga 117
             |||||||||||||||||||
Sbjct: 29143 tttttcataagttattgga 29125
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 89      gtacagtacatttttcata 107
               |||||||||||||||||||
Sbjct: 3965548 gtacagtacatttttcata 3965566
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>emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in linkage group 7,
             complete sequence
          Length = 233826

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    tgcaatcatgtattcttgcaatc 84
             |||||| ||||||||||||||||
Sbjct: 98369 tgcaattatgtattcttgcaatc 98391
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>gb|AC097472.2| Homo sapiens BAC clone RP11-75M18 from 4, complete sequence
          Length = 146479

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    tttttcataagttattgga 117
             |||||||||||||||||||
Sbjct: 68483 tttttcataagttattgga 68501
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     taaactagtttgacaaatt 59
              |||||||||||||||||||
Sbjct: 683517 taaactagtttgacaaatt 683499
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>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence
          Length = 199917

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     tttttcataagttattgga 117
              |||||||||||||||||||
Sbjct: 171243 tttttcataagttattgga 171261
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>gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complete sequence
          Length = 122076

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    tctaaactagtttgacaaa 57
             |||||||||||||||||||
Sbjct: 58561 tctaaactagtttgacaaa 58579
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>gb|AY569337.1| Pan troglodytes chromosome 10 clone RP43-163C1, complete sequence
          Length = 177228

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 98     atttttcataagttattgg 116
              |||||||||||||||||||
Sbjct: 114695 atttttcataagttattgg 114677
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>gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568A19, complete sequence
          Length = 157613

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     tttttcataagttattgga 117
              |||||||||||||||||||
Sbjct: 109405 tttttcataagttattgga 109387
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 96      acatttttcataagttatt 114
               |||||||||||||||||||
Sbjct: 2848576 acatttttcataagttatt 2848594
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>emb|AL606599.3|OSJN00034 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0050F15,
             complete sequence
          Length = 150562

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    caagcaagttattttcata 37
             |||||||||||||||||||
Sbjct: 78889 caagcaagttattttcata 78871
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>gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 104913

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    tttttcataagttattgga 117
             |||||||||||||||||||
Sbjct: 36201 tttttcataagttattgga 36183
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>emb|AL607143.14| Mouse DNA sequence from clone RP23-455G15 on chromosome 4, complete
              sequence
          Length = 173417

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     gttattttcatattctaaa 44
              |||||||||||||||||||
Sbjct: 106612 gttattttcatattctaaa 106594
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>dbj|D13454.1|YSACACHS3 Candida albicans CACHS3 gene for chitin synthase III
          Length = 4610

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 31   tttcatattctaaactagt 49
            |||||||||||||||||||
Sbjct: 2734 tttcatattctaaactagt 2716
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>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds
          Length = 250000

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 98     atttttcataagttattgg 116
              |||||||||||||||||||
Sbjct: 179514 atttttcataagttattgg 179532


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,383,704
Number of Sequences: 3902068
Number of extensions: 1383704
Number of successful extensions: 106663
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106085
Number of HSP's gapped (non-prelim): 578
length of query: 122
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 101
effective length of database: 17,151,101,840
effective search space: 1732261285840
effective search space used: 1732261285840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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