ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast14a12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 377 bits (190), Expect = e-101 Identities = 259/282 (91%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 506 gcgggagcactcggcggggaagccctgcgggaatcgccagccgtcgtcgcagtagttgta 447 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | ||||||||| |||||||||||||||||||| | | ||||||| ||||||||||||| Sbjct: 446 gtgcatgtagttctgcctggcccaggcgacggtgccccactcggcggcgtcgagctggcg 387 Query: 300 gtccatccagcggccggtgccggcggggcaggagagcgggcggccgtcgccgttgggcac 359 | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 386 gctcatccagcggtcggtgccggcggggcaggagagcgggcggccgtcgccgtcgggcac 327 Query: 360 gcacgcgtcggcggagtagccgcggtaggagacgacgaagggcgcgccggaccagtcgac 419 ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| || Sbjct: 326 gcaggcgtcggcggagtagccgcggtaggagacggcgaagggcgcggcggaccagtccac 267 Query: 420 ggggaccttgcccttctgcgtggcccagtagctgccgtccca 461 ||||| |||| ||||||||||||||||||||||||||| Sbjct: 266 cttcaccttcccctgctgcgtggcccagtagctgccgtccca 225
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 369 bits (186), Expect = 5e-99 Identities = 258/282 (91%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 984 gcgggagcactcggcggggaagccctgcgggaagcgccagccgtcgtcgcagtagttgta 925 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | ||||||||| |||||||||||||||||||| | | ||||||| ||||||||||||| Sbjct: 924 gtgcatgtagttctgcctggcccaggcgacggtgccccactcggcggcgtcgagctggcg 865 Query: 300 gtccatccagcggccggtgccggcggggcaggagagcgggcggccgtcgccgttgggcac 359 | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 864 gctcatccagcggtcggtgccggcggggcaggagagcgggcggccgtcgccgtcgggcac 805 Query: 360 gcacgcgtcggcggagtagccgcggtaggagacgacgaagggcgcgccggaccagtcgac 419 ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| || Sbjct: 804 gcaggcgtcggcggagtagccgcggtaggagacggcgaagggcgcggcggaccagtccac 745 Query: 420 ggggaccttgcccttctgcgtggcccagtagctgccgtccca 461 ||||| |||| ||||||||||||||||||||||||||| Sbjct: 744 cttcaccttcccctgctgcgtggcccagtagctgccgtccca 703
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 143 bits (72), Expect = 6e-31 Identities = 96/104 (92%) Strand = Plus / Minus Query: 358 acgcacgcgtcggcggagtagccgcggtaggagacgacgaagggcgcgccggaccagtcg 417 ||||| |||| |||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 767 acgcaggcgttggcggagtagccccggtaggagacgacgaagggcgcggcggaccagtcc 708 Query: 418 acggggaccttgcccttctgcgtggcccagtagctgccgtccca 461 ||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 707 acgggcaccttgcccttctcggtggcccagtagctgccgtccca 664 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 186 gcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgtagcgcat 245 |||||||| |||| |||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 927 gcactcgggcgggaggccctgggggaaccgccagccgtcgtcgcagtagttgtagcgcat 868 Query: 246 gtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctg 296 ||||| || | |||||| ||||||| | | ||||||||||||| |||| Sbjct: 867 gtagttgctctcggcccaccggacggtgccccactcggcgtcgtcgggctg 817
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 910 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 851 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | |||||||| |||| |||||| ||||||||| || |||||||| ||||||||| ||| Sbjct: 850 ggacatgtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagctcgcg 791 Query: 300 gt 301 || Sbjct: 790 gt 789 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtccca 461 |||||||||||||||||||| Sbjct: 639 gcccagtagctgccgtccca 620
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 915 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 856 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | |||||||| |||| |||||| ||||||||| || |||||||| ||||||||| ||| Sbjct: 855 ggacatgtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagctcgcg 796 Query: 300 gt 301 || Sbjct: 795 gt 794 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtccca 461 |||||||||||||||||||| Sbjct: 644 gcccagtagctgccgtccca 625
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 8322681 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 8322622 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | |||||||| |||| |||||| ||||||||| || |||||||| ||||||||| ||| Sbjct: 8322621 ggacatgtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagctcgcg 8322562 Query: 300 gt 301 || Sbjct: 8322561 gt 8322560 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtccca 461 |||||||||||||||||||| Sbjct: 8322410 gcccagtagctgccgtccca 8322391
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 906 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 847 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | |||||||| |||| |||||| ||||||||| || |||||||| ||||||||| ||| Sbjct: 846 ggacatgtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagctcgcg 787 Query: 300 gt 301 || Sbjct: 786 gt 785 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtccca 461 |||||||||||||||||||| Sbjct: 635 gcccagtagctgccgtccca 616
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 62790 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 62731 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | |||||||| |||| |||||| ||||||||| || |||||||| ||||||||| ||| Sbjct: 62730 ggacatgtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagctcgcg 62671 Query: 300 gt 301 || Sbjct: 62670 gt 62669 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtccca 461 |||||||||||||||||||| Sbjct: 62519 gcccagtagctgccgtccca 62500
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 915 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 856 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | |||||||| |||| |||||| ||||||||| || |||||||| ||||||||| ||| Sbjct: 855 ggacatgtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagctcgcg 796 Query: 300 gt 301 || Sbjct: 795 gt 794 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtccca 461 |||||||||||||||||||| Sbjct: 644 gcccagtagctgccgtccca 625
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 910 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 851 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcg 299 | |||||||| |||| |||||| ||||||||| || |||||||| ||||||||| ||| Sbjct: 850 ggacatgtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagctcgcg 791 Query: 300 gt 301 || Sbjct: 790 gt 789 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtccca 461 |||||||||||||||||||| Sbjct: 639 gcccagtagctgccgtccca 620
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 113 bits (57), Expect = 5e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 369 ggcggagtagccgcggtaggagacgacgaagggcgcgccggaccagtcgacggggacctt 428 |||| |||||| ||||||||||||||||||||||||| |||||||||||| | |||| | Sbjct: 752 ggcgtagtagctgcggtaggagacgacgaagggcgcgtcggaccagtcgatgccgaccct 693 Query: 429 gcccttctgcgtggcccagtagctgccgtccca 461 |||||||| ||||||||||||||||||||||| Sbjct: 692 gcccttctcggtggcccagtagctgccgtccca 660 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 ||||| |||||||||||||| || |||||||| | ||| ||||| | |||||||||||| Sbjct: 929 gcgggcgcactcggcggggagtccttgcgggaacctccacccatcctggcagtagttgta 870 Query: 240 gcgcatgtagtcgcgc 255 ||||||| ||| |||| Sbjct: 869 gcgcatgaagttgcgc 854
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 359 cgcacgcgtcggcggagtagccgcggtaggagacgacgaagggcgcgccggaccagtcga 418 |||| |||| ||||| |||| | ||||||||||||||||||||||||| ||||||||||| Sbjct: 622 cgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtcga 563 Query: 419 cggggaccttgcccttctgcgtggcccagtagctgccgtccca 461 ||||| |||||| ||||||||||||||||||||||||| Sbjct: 562 tcttgacctcgcccttgcgcgtggcccagtagctgccgtccca 520 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 ||||| |||||| ||||||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 807 gcgggcgcactctccggggaacccctgcgggaagcgccacccgtcatcgcagtagttgta 748
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 359 cgcacgcgtcggcggagtagccgcggtaggagacgacgaagggcgcgccggaccagtcga 418 |||| |||| ||||| |||| | ||||||||||||||||||||||||| ||||||||||| Sbjct: 786 cgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtcga 727 Query: 419 cggggaccttgcccttctgcgtggcccagtagctgccgtccca 461 ||||| |||||| ||||||||||||||||||||||||| Sbjct: 726 tcttgacctcgcccttgcgcgtggcccagtagctgccgtccca 684 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 ||||| |||||| ||||||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 971 gcgggcgcactctccggggaacccctgcgggaagcgccacccgtcatcgcagtagttgta 912
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 91.7 bits (46), Expect = 2e-15 Identities = 77/86 (89%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 376 tagccgcggtaggagacgacgaagggcgcgccggaccagtcgacggggaccttgcccttc 435 ||||| || ||||||||||||||||||||| |||||||||| || || |||||||||||| Sbjct: 776 tagccccgttaggagacgacgaagggcgcggcggaccagtccaccggcaccttgcccttc 717 Query: 436 tgcgtgg-cccagtagctgccgtccc 460 | |||| |||||||||||||||||| Sbjct: 716 tcggtggccccagtagctgccgtccc 691
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Minus Query: 186 gcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgtagcgcat 245 ||||||| |||||||||||| ||||| ||||| || ||| |||||||||||||| | Sbjct: 883 gcactcgccggggaagcccttggggaagcgccatccgtcggcgcagtagttgtaggagag 824 Query: 246 gtagtcgcgcctggcccaggcgacggtggcgcgctcggcgtcgtcgagctggcggtccat 305 | ||| |||| |||||| ||||||||| | ||||| |||||||||||| ||||| ||| Sbjct: 823 gcagttgcgctcggcccacgcgacggtgctgagctcgccgtcgtcgagctcgcggtgcat 764 Query: 306 ccagcggccggtgccggcggggcaggag 333 |||| | || ||||||||||||||||| Sbjct: 763 ccaggcgtcgctgccggcggggcaggag 736 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 435 ctgcgtggcccagtagctgccgtccca 461 |||||| |||||||||||||||||||| Sbjct: 634 ctgcgtcgcccagtagctgccgtccca 608
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 |||||||||||||||||||||||| | ||||| |||||||| ||| |||||||| ||| Sbjct: 907 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 848 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtg 273 | |||||| | || | |||||||||||||||| Sbjct: 847 ggacatgtacttgctctcggcccaggcgacggtg 814 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 439 gtggcccagtagctgccgtcccaga 463 ||||||||||||||||||||||||| Sbjct: 654 gtggcccagtagctgccgtcccaga 630 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 375 gtagccgcggtaggagacgacgaagggcgc 404 ||||||||||||| ||||||||||||||| Sbjct: 718 gtagccgcggtagttgacgacgaagggcgc 689
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 186 gcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgtagcgcat 245 |||||||||||||||||| | ||||| |||||||| ||| |||||||| |||| ||| Sbjct: 890 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 831 Query: 246 gtagtcgcgcctggcccaggcgacggtg 273 ||| | || | |||||||||||||||| Sbjct: 830 gtacttgctctcggcccaggcgacggtg 803 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 ggagtagccgcggtaggagacgacgaagggcgc 404 |||||||||||||||| ||||||||||||||| Sbjct: 710 ggagtagccgcggtagttgacgacgaagggcgc 678 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 439 gtggcccagtagctgccgtcccaga 463 ||||||||||||||||||||||||| Sbjct: 643 gtggcccagtagctgccgtcccaga 619
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 186 gcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgtagcgcat 245 |||||||||||||||||| | ||||| |||||||| ||| |||||||| |||| ||| Sbjct: 890 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 831 Query: 246 gtagtcgcgcctggcccaggcgacggtg 273 ||| | || | |||||||||||||||| Sbjct: 830 gtacttgctctcggcccaggcgacggtg 803 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 ggagtagccgcggtaggagacgacgaagggcgc 404 |||||||||||||||| ||||||||||||||| Sbjct: 710 ggagtagccgcggtagttgacgacgaagggcgc 678 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 439 gtggcccagtagctgccgtcccaga 463 ||||||||||||||||||||||||| Sbjct: 643 gtggcccagtagctgccgtcccaga 619
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 377 agccgcggtaggagacgacgaagggcgcgccggaccagtc 416 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 723 agccgcggtaggaggcgacgaagggcgcgttggaccagtc 684
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 180 gcgggagcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgta 239 ||||| ||||||||||||||| || | ||||| |||||||| ||| |||||||| ||| Sbjct: 895 gcgggtgcactcggcggggaatccgttggggaagcgccagccgtcggtgcagtagtcgta 836 Query: 240 gcgcatgtagtcgcgcctggcccaggcgacggtg 273 | |||||| | || | |||||||||||||||| Sbjct: 835 ggacatgtacttgctctcggcccaggcgacggtg 802 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 442 gcccagtagctgccgtcccaga 463 |||||||||||||||||||||| Sbjct: 639 gcccagtagctgccgtcccaga 618 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 ggagtagccgcggtaggagacgacgaagggcgc 404 |||||||||||||||| ||||||||| ||||| Sbjct: 709 ggagtagccgcggtagttgacgacgaacggcgc 677
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 227 cgcagtagttgtagcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgt 286 |||||||||||||| |||||||| |||| || | ||||||| ||| || ||| ||||| Sbjct: 108866 cgcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgagcttggcgt 108807 Query: 287 cgtcgagct 295 ||||||||| Sbjct: 108806 cgtcgagct 108798
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 227 cgcagtagttgtagcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgt 286 |||||||||||||| |||||||| |||| || | ||||||| ||| || ||| ||||| Sbjct: 28249 cgcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgagcttggcgt 28190 Query: 287 cgtcgagct 295 ||||||||| Sbjct: 28189 cgtcgagct 28181
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 227 cgcagtagttgtagcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgt 286 |||||||||||||| |||||||| |||| || | ||||||| ||| || ||| ||||| Sbjct: 108984 cgcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgagcttggcgt 108925 Query: 287 cgtcgagct 295 ||||||||| Sbjct: 108924 cgtcgagct 108916
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 227 cgcagtagttgtagcgcatgtagtcgcgcctggcccaggcgacggtggcgcgctcggcgt 286 |||||||||||||| |||||||| |||| || | ||||||| ||| || ||| ||||| Sbjct: 33677806 cgcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgagcttggcgt 33677747 Query: 287 cgtcgagct 295 ||||||||| Sbjct: 33677746 cgtcgagct 33677738 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||| ||||||||||||||||| Sbjct: 30516387 ggagcactcgggcgggaagccctgcgggaa 30516416 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cggtggcgcgctcggcgtcg 288 |||||||||||||||||||| Sbjct: 5610080 cggtggcgcgctcggcgtcg 5610061
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 194 cggggaagccctgcgggaatcgccagccatcgtcgcagtagttgtag 240 ||||||| |||| ||||| |||||||| ||| |||||||||||||| Sbjct: 886 cggggaatcccttggggaaccgccagccgtcggcgcagtagttgtag 840 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 435 ctgcgtggcccagtagctgccgtccca 461 |||||| |||||||||||||||||||| Sbjct: 651 ctgcgttgcccagtagctgccgtccca 625 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gtagccgcggtaggagacgacgaagggc 402 |||| ||||||||||||| ||||||||| Sbjct: 711 gtaggcgcggtaggagaccacgaagggc 684
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 ggcgcgctcggcgtcgtcgagct 295 ||||||||||||||||||||||| Sbjct: 177881 ggcgcgctcggcgtcgtcgagct 177903
>gb|AF378327.1| Schizochytrium sp. ATCC_20888 polyunsaturated fatty acid synthase subunit A gene, complete cds Length = 8733 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 273 ggcgcgctcggcgtcgtcgagctggcg 299 |||||||| |||||||||||||||||| Sbjct: 3090 ggcgcgcttggcgtcgtcgagctggcg 3064
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 435 ctgcgtggcccagtagctgccgtccca 461 |||||| |||||||||||||||||||| Sbjct: 643 ctgcgtcgcccagtagctgccgtccca 617 Score = 44.1 bits (22), Expect = 0.40 Identities = 70/86 (81%) Strand = Plus / Minus Query: 187 cactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgtagcgcatg 246 |||||| ||||||| |||| ||||| | |||||| ||| |||||||||||||| | | Sbjct: 891 cactcgccggggaatcccttggggaacctccagccgtcggcgcagtagttgtaggagagg 832 Query: 247 tagtcgcgcctggcccaggcgacggt 272 ||| |||| ||||||||||||||| Sbjct: 831 cagttgcgctcggcccaggcgacggt 806
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Minus Query: 186 gcactcggcggggaagccctgcgggaatcgccagccatcgtcgcagtagttgtag 240 |||||||||||| | |||||||||||| ||| | | ||| |||||||||||||| Sbjct: 995 gcactcggcgggcacgccctgcgggaagcgcttggcgtcggcgcagtagttgtag 941
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||| ||||||||||||||||| Sbjct: 813 ggagcactcgggcgggaagccctgcgggaa 784
>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to marker R11, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||||||||| |||||| ||||| Sbjct: 78 ggagcactcggcggggacgccctgggggaa 49
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 ggcgcgctcggcgtcgtcgagc 294 |||||||||||||||||||||| Sbjct: 2228954 ggcgcgctcggcgtcgtcgagc 2228933
>gb|AC113524.9| Mus musculus chromosome 6, clone RP23-120I17, complete sequence Length = 216807 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 gaacaaatagaccaagaaaaccaaga 103 ||||||||||||||||| |||||||| Sbjct: 136826 gaacaaatagaccaagagaaccaaga 136851
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 aagaattgaactttattatcat 27 |||||||||||||||||||||| Sbjct: 1396642 aagaattgaactttattatcat 1396663
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 ggcgcgctcggcgtcgtcgagc 294 |||||||||||||||||||||| Sbjct: 390265 ggcgcgctcggcgtcgtcgagc 390244
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||| ||||||||||||||||| Sbjct: 149764 ggagcactcgggcgggaagccctgcgggaa 149793
>gb|AC010447.7| Homo sapiens chromosome unknown clone CTD-2236O18, complete sequence Length = 121020 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 aaaaccaagaaaccagaaatga 115 |||||||||||||||||||||| Sbjct: 42256 aaaaccaagaaaccagaaatga 42277
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 ggcgcgctcggcgtcgtcgagc 294 |||||||||||||||||||||| Sbjct: 1597833 ggcgcgctcggcgtcgtcgagc 1597854
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||||||||| |||||| ||||| Sbjct: 28773072 ggagcactcggcggggacgccctgggggaa 28773101
>gb|AE004520.1| Pseudomonas aeruginosa PAO1, section 81 of 529 of the complete genome Length = 12217 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 tggcgcgctcggcgtcgtcgagctgg 297 ||||||||||||||| |||||||||| Sbjct: 5694 tggcgcgctcggcgtagtcgagctgg 5719
>gb|AC007377.3| Homo sapiens BAC clone RP11-3F16 from 2, complete sequence Length = 144294 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 aaaaccaagaaaccagaaatga 115 |||||||||||||||||||||| Sbjct: 41024 aaaaccaagaaaccagaaatga 41045
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||||||||| |||||| ||||| Sbjct: 80847 ggagcactcggcggggacgccctgggggaa 80876
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||||||||| |||||| ||||| Sbjct: 985 ggagcactcggcggggacgccctgggggaa 956
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 183 ggagcactcggcggggaagccctgcgggaa 212 ||||||||||| ||||||||||||||||| Sbjct: 903 ggagcactcgggcgggaagccctgcgggaa 874
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 ggcgcgctcggcgtcgtcgagc 294 |||||||||||||||||||||| Sbjct: 2591155 ggcgcgctcggcgtcgtcgagc 2591176
>ref|NM_191230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 444 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 ccaggcgacggtggcgcgctcggcgtcgt 289 ||||||| ||| ||||||||||||||||| Sbjct: 114 ccaggcggcggcggcgcgctcggcgtcgt 86
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggcgcgctcggcgtcgtc 290 ||||||||||||||||||||| Sbjct: 3010896 ggtggcgcgctcggcgtcgtc 3010876
>emb|AL356866.22| Human DNA sequence from clone RP11-211D10 on chromosome 13 Contains a CpG island, complete sequence Length = 182321 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 agaaaaccaagaaaccagaaa 112 ||||||||||||||||||||| Sbjct: 27328 agaaaaccaagaaaccagaaa 27348
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gcgcgctcggcgtcgtcgagc 294 ||||||||||||||||||||| Sbjct: 41491 gcgcgctcggcgtcgtcgagc 41511
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gcgcgctcggcgtcgtcgagc 294 ||||||||||||||||||||| Sbjct: 324284 gcgcgctcggcgtcgtcgagc 324304
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 gcgcgctcggcgtcgtcgagc 294 ||||||||||||||||||||| Sbjct: 156521 gcgcgctcggcgtcgtcgagc 156501
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 ccaggcgacggtggcgcgctcggcg 285 |||||||| |||||||||||||||| Sbjct: 726010 ccaggcgatggtggcgcgctcggcg 725986
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 tcgcgcctggcccaggcgacggtgg 274 |||||||||||||||||| |||||| Sbjct: 2347779 tcgcgcctggcccaggcggcggtgg 2347803
>dbj|AK040351.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430088F20 product:unclassifiable, full insert sequence Length = 2905 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 gaaaaccaagaaaccagaaatgaat 117 ||||||||||| ||||||||||||| Sbjct: 2775 gaaaaccaagagaccagaaatgaat 2751
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 ccaggcgacggtggcgcgctcggcgtcgt 289 ||||||| ||| ||||||||||||||||| Sbjct: 31411078 ccaggcggcggcggcgcgctcggcgtcgt 31411050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgcgctcggcgtcgtcgagc 294 |||||||||||||||||||| Sbjct: 40519234 cgcgctcggcgtcgtcgagc 40519253
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 ccaggcgacggtggcgcgctcggcgtcgt 289 ||||||| ||| ||||||||||||||||| Sbjct: 5142 ccaggcggcggcggcgcgctcggcgtcgt 5114
>emb|AL607123.22| Mouse DNA sequence from clone RP23-391E6 on chromosome 4, complete sequence Length = 149369 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 gaaaaccaagaaaccagaaatgaat 117 ||||||||||| ||||||||||||| Sbjct: 63163 gaaaaccaagagaccagaaatgaat 63187
>ref|XM_636698.1| Dictyostelium discoideum hypothetical protein (DDB0205717), partial mRNA Length = 2184 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atagaccaagaaaaccaaga 103 |||||||||||||||||||| Sbjct: 1817 atagaccaagaaaaccaaga 1836
>ref|XM_474687.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1524 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cggtggcgcgctcggcgtcg 288 |||||||||||||||||||| Sbjct: 262 cggtggcgcgctcggcgtcg 243
>ref|XM_463666.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 645 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cgcgctcggcgtcgtcgagc 294 |||||||||||||||||||| Sbjct: 361 cgcgctcggcgtcgtcgagc 342
>gb|AC104192.11| Mus musculus chromosome 5, clone RP24-439L10, complete sequence Length = 155839 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 agaaaccagaaatgaatgga 120 |||||||||||||||||||| Sbjct: 83628 agaaaccagaaatgaatgga 83609
>gb|AC164607.4| Mus musculus chromosome 5, clone RP23-455A10, complete sequence Length = 183927 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 agaaaccagaaatgaatgga 120 |||||||||||||||||||| Sbjct: 38868 agaaaccagaaatgaatgga 38887
>ref|XM_367621.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07532.4) partial mRNA Length = 3516 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 tcggcgtcgtcgagctggcggtcc 303 ||||||||| |||||||||||||| Sbjct: 2072 tcggcgtcgccgagctggcggtcc 2049
>ref|XM_580917.2| PREDICTED: Bos taurus similar to SH3 domain GRB2-like protein B2 (Endophilin B2) (LOC504750), mRNA Length = 1982 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gacggggaccttgcccttct 436 |||||||||||||||||||| Sbjct: 1296 gacggggaccttgcccttct 1277
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgcgctcggcgtcgtcgagc 294 |||||||||||||||||||| Sbjct: 14163465 cgcgctcggcgtcgtcgagc 14163484
>ref|XM_534735.2| PREDICTED: Canis familiaris similar to SEC14-like 3 (LOC477540), mRNA Length = 1526 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gaaaaccaagaaaccagaaa 112 |||||||||||||||||||| Sbjct: 1477 gaaaaccaagaaaccagaaa 1496
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 gccggtgccggcggggcaggagag 335 ||||||||||||||||| |||||| Sbjct: 3522775 gccggtgccggcggggccggagag 3522798
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 gtggcgcgctcggcgtcgtcgagc 294 |||| ||||||||||||||||||| Sbjct: 752435 gtggtgcgctcggcgtcgtcgagc 752412
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ggcgcgctcggcgtcgtcga 292 |||||||||||||||||||| Sbjct: 3489967 ggcgcgctcggcgtcgtcga 3489948
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 agccgcggtaggagacgacgaagggcgc 404 |||| ||||||||| ||||||||||||| Sbjct: 749 agccccggtaggaggcgacgaagggcgc 722
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tggcgcgctcggcgtcgtcg 291 |||||||||||||||||||| Sbjct: 114966 tggcgcgctcggcgtcgtcg 114985
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgcgctcggcgtcgtcgagc 294 |||||||||||||||||||| Sbjct: 37756 cgcgctcggcgtcgtcgagc 37775
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgcgctcggcgtcgtcgagc 294 |||||||||||||||||||| Sbjct: 1440749 cgcgctcggcgtcgtcgagc 1440768
>gb|AE011937.1| Xanthomonas axonopodis pv. citri str. 306, section 315 of 469 of the complete genome Length = 10372 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 gccggtgccggcggggcaggagag 335 ||||||||||||||||| |||||| Sbjct: 7821 gccggtgccggcggggccggagag 7844
>gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, complete sequence Length = 220031 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 caagaaaaccaagaaaccagaaat 113 |||||||||||||||||| ||||| Sbjct: 73329 caagaaaaccaagaaacctgaaat 73352
>gb|AC007120.6| Arabidopsis thaliana chromosome 2 clone T15D9 map mi421, complete sequence Length = 102331 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacggaatcaagaacaaata 86 |||||||||||||||||||| Sbjct: 42025 aacggaatcaagaacaaata 42044
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgcgctcggcgtcgtcgagc 294 |||||||||||||||||||| Sbjct: 14158440 cgcgctcggcgtcgtcgagc 14158459
>gb|AC110758.3| Homo sapiens BAC clone RP11-24D11 from 4, complete sequence Length = 165028 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tctagtaggtaagaataagc 59 |||||||||||||||||||| Sbjct: 61904 tctagtaggtaagaataagc 61923
>gb|AC106894.4| Homo sapiens BAC clone RP11-141E13 from 4, complete sequence Length = 183176 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tctagtaggtaagaataagc 59 |||||||||||||||||||| Sbjct: 73148 tctagtaggtaagaataagc 73129
>gb|AC013407.7| Homo sapiens BAC clone RP11-399L3 from 2, complete sequence Length = 171428 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aacaaatagaccaagaaaac 98 |||||||||||||||||||| Sbjct: 98211 aacaaatagaccaagaaaac 98192
>gb|AC084527.1|CBRG21F09 Caenorhabditis briggsae cosmid G21F09, complete sequence Length = 40701 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 agaccaagaaaaccaagaaa 105 |||||||||||||||||||| Sbjct: 6970 agaccaagaaaaccaagaaa 6951
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgcgctcggcgtcgtcgagc 294 |||||||||||||||||||| Sbjct: 80858 cgcgctcggcgtcgtcgagc 80877
>gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis thaliana BAC F1E22, complete sequence Length = 92356 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agaccaagaaaaccaagaaa 105 |||||||||||||||||||| Sbjct: 66251 agaccaagaaaaccaagaaa 66270
>gb|AY204468.1| Myxococcus xanthus clone C1203 adventurous gliding motility protein I (agmI), and hypothetical protein genes, complete cds; and nucleotide sugar dehydratase gene, partial cds Length = 3651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cgggcggccgtcgccgttgg 355 |||||||||||||||||||| Sbjct: 2323 cgggcggccgtcgccgttgg 2342
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ggtgccggcggggcaggaga 334 |||||||||||||||||||| Sbjct: 2341308 ggtgccggcggggcaggaga 2341289
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 gagacgacgaagggcgcgcc 407 |||||||||||||||||||| Sbjct: 1052294 gagacgacgaagggcgcgcc 1052313
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ggcgcgctcggcgtcgtcga 292 |||||||||||||||||||| Sbjct: 845160 ggcgcgctcggcgtcgtcga 845141
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cggtggcgcgctcggcgtcg 288 |||||||||||||||||||| Sbjct: 67287 cggtggcgcgctcggcgtcg 67268
>gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome 17, complete sequence Length = 211272 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gaatcaagaacaaatagacc 90 |||||||||||||||||||| Sbjct: 111715 gaatcaagaacaaatagacc 111696
>gb|M80238.1|ATHDNA Arabidopsis thaliana receptor kinase (Ark1) gene, exons 1-7 Length = 4312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agaccaagaaaaccaagaaa 105 |||||||||||||||||||| Sbjct: 469 agaccaagaaaaccaagaaa 488
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 agccgcggtaggagacgacgaagggcgc 404 |||| ||||||||| ||||||||||||| Sbjct: 710 agccccggtaggaggcgacgaagggcgc 683 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,090,944 Number of Sequences: 3902068 Number of extensions: 3090944 Number of successful extensions: 70861 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68928 Number of HSP's gapped (non-prelim): 1926 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
