ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast13h07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 274 bits (138), Expect = 2e-70 Identities = 162/170 (95%) Strand = Plus / Minus Query: 202 gatggcgcacaaaagctctgatctctcttagtatttgatcggggccaggatctccagctg 261 |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 666 gatggcgcacggaagctctaatctctcttagtatttgatcggggctaggatctccagctg 607 Query: 262 agttcccaacttctcctcggctgccttctcggccttgacgcggagcttcgccagctgctt 321 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 606 agttcccaacttctcctcggccgccttctcggccttgacgcggagcttcgccagttgctt 547 Query: 322 tctcctgtcgtacgagaccttggccttctccttcctcttttcctccagct 371 |||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 546 tctcctgtcgtaggagaccttggccttctcctttctcttttcctccagct 497
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 145 bits (73), Expect = 1e-31 Identities = 124/141 (87%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 ||||||||||||| || || ||||||||||||| |||| |||||||||||||||||||| Sbjct: 692 agtatttgatcggagcaagaatctccagctgaggacccagcttctcctcggctgccttct 633 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 | |||||||| || ||||||||||| ||||| |||||||| || | ||||||||||||| Sbjct: 632 cagccttgacacgcagcttcgccagttgcttcctcctgtcataggcaaccttggccttct 573 Query: 351 ccttcctcttttcctccagct 371 |||||||||| ||||| |||| Sbjct: 572 ccttcctcttctcctcaagct 552 Score = 75.8 bits (38), Expect = 9e-11 Identities = 85/98 (86%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 33 agaatcttcaaatgcacacatttgataaac-gaaacagttgaccaagtagaaaatttcaa 91 ||||||| ||||||||||||||||| |||| ||||||||| | | | ||||||||||||| Sbjct: 885 agaatctccaaatgcacacatttgacaaacagaaacagttcatcgactagaaaatttcaa 826 Query: 92 atgagggtagcagaact-gcatgcataacaaaggttta 128 || | ||||||||||| | ||||||||||| |||||| Sbjct: 825 ataggagtagcagaactgggatgcataacaacggttta 788
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 1e-31 Identities = 124/141 (87%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 ||||||||||||| || || ||||||||||||| |||| |||||||||||||||||||| Sbjct: 30901123 agtatttgatcggagcaagaatctccagctgaggacccagcttctcctcggctgccttct 30901064 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 | |||||||| || ||||||||||| ||||| |||||||| || | ||||||||||||| Sbjct: 30901063 cagccttgacacgcagcttcgccagttgcttcctcctgtcataggcaaccttggccttct 30901004 Query: 351 ccttcctcttttcctccagct 371 |||||||||| ||||| |||| Sbjct: 30901003 ccttcctcttctcctcaagct 30900983 Score = 75.8 bits (38), Expect = 9e-11 Identities = 85/98 (86%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 33 agaatcttcaaatgcacacatttgataaac-gaaacagttgaccaagtagaaaatttcaa 91 ||||||| ||||||||||||||||| |||| ||||||||| | | | ||||||||||||| Sbjct: 30901316 agaatctccaaatgcacacatttgacaaacagaaacagttcatcgactagaaaatttcaa 30901257 Query: 92 atgagggtagcagaact-gcatgcataacaaaggttta 128 || | ||||||||||| | ||||||||||| |||||| Sbjct: 30901256 ataggagtagcagaactgggatgcataacaacggttta 30901219
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 145 bits (73), Expect = 1e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 ||||||||||||| || || ||||||||||||| |||| |||||||||||||||||||| Sbjct: 41967 agtatttgatcggagcaagaatctccagctgaggacccagcttctcctcggctgccttct 42026 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 | |||||||| || ||||||||||| ||||| |||||||| || | ||||||||||||| Sbjct: 42027 cagccttgacacgcagcttcgccagttgcttcctcctgtcataggcaaccttggccttct 42086 Query: 351 ccttcctcttttcctccagct 371 |||||||||| ||||| |||| Sbjct: 42087 ccttcctcttctcctcaagct 42107 Score = 75.8 bits (38), Expect = 9e-11 Identities = 85/98 (86%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 33 agaatcttcaaatgcacacatttgataaac-gaaacagttgaccaagtagaaaatttcaa 91 ||||||| ||||||||||||||||| |||| ||||||||| | | | ||||||||||||| Sbjct: 41774 agaatctccaaatgcacacatttgacaaacagaaacagttcatcgactagaaaatttcaa 41833 Query: 92 atgagggtagcagaact-gcatgcataacaaaggttta 128 || | ||||||||||| | ||||||||||| |||||| Sbjct: 41834 ataggagtagcagaactgggatgcataacaacggttta 41871
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 1e-31 Identities = 124/141 (87%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 ||||||||||||| || || ||||||||||||| |||| |||||||||||||||||||| Sbjct: 30991646 agtatttgatcggagcaagaatctccagctgaggacccagcttctcctcggctgccttct 30991587 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 | |||||||| || ||||||||||| ||||| |||||||| || | ||||||||||||| Sbjct: 30991586 cagccttgacacgcagcttcgccagttgcttcctcctgtcataggcaaccttggccttct 30991527 Query: 351 ccttcctcttttcctccagct 371 |||||||||| ||||| |||| Sbjct: 30991526 ccttcctcttctcctcaagct 30991506 Score = 75.8 bits (38), Expect = 9e-11 Identities = 85/98 (86%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 33 agaatcttcaaatgcacacatttgataaac-gaaacagttgaccaagtagaaaatttcaa 91 ||||||| ||||||||||||||||| |||| ||||||||| | | | ||||||||||||| Sbjct: 30991839 agaatctccaaatgcacacatttgacaaacagaaacagttcatcgactagaaaatttcaa 30991780 Query: 92 atgagggtagcagaact-gcatgcataacaaaggttta 128 || | ||||||||||| | ||||||||||| |||||| Sbjct: 30991779 ataggagtagcagaactgggatgcataacaacggttta 30991742
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 145 bits (73), Expect = 1e-31 Identities = 124/141 (87%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 ||||||||||||| || || ||||||||||||| |||| |||||||||||||||||||| Sbjct: 702 agtatttgatcggagcaagaatctccagctgaggacccagcttctcctcggctgccttct 643 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 | |||||||| || ||||||||||| ||||| |||||||| || | ||||||||||||| Sbjct: 642 cagccttgacacgcagcttcgccagttgcttcctcctgtcataggcaaccttggccttct 583 Query: 351 ccttcctcttttcctccagct 371 |||||||||| ||||| |||| Sbjct: 582 ccttcctcttctcctcaagct 562 Score = 75.8 bits (38), Expect = 9e-11 Identities = 85/98 (86%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 33 agaatcttcaaatgcacacatttgataaac-gaaacagttgaccaagtagaaaatttcaa 91 ||||||| ||||||||||||||||| |||| ||||||||| | | | ||||||||||||| Sbjct: 895 agaatctccaaatgcacacatttgacaaacagaaacagttcatcgactagaaaatttcaa 836 Query: 92 atgagggtagcagaact-gcatgcataacaaaggttta 128 || | ||||||||||| | ||||||||||| |||||| Sbjct: 835 ataggagtagcagaactgggatgcataacaacggttta 798
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 145 bits (73), Expect = 1e-31 Identities = 124/141 (87%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 ||||||||||||| || || ||||||||||||| |||| |||||||||||||||||||| Sbjct: 702 agtatttgatcggagcaagaatctccagctgaggacccagcttctcctcggctgccttct 643 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 | |||||||| || ||||||||||| ||||| |||||||| || | ||||||||||||| Sbjct: 642 cagccttgacacgcagcttcgccagttgcttcctcctgtcataggcaaccttggccttct 583 Query: 351 ccttcctcttttcctccagct 371 |||||||||| ||||| |||| Sbjct: 582 ccttcctcttctcctcaagct 562 Score = 75.8 bits (38), Expect = 9e-11 Identities = 85/98 (86%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 33 agaatcttcaaatgcacacatttgataaac-gaaacagttgaccaagtagaaaatttcaa 91 ||||||| ||||||||||||||||| |||| ||||||||| | | | ||||||||||||| Sbjct: 895 agaatctccaaatgcacacatttgacaaacagaaacagttcatcgactagaaaatttcaa 836 Query: 92 atgagggtagcagaact-gcatgcataacaaaggttta 128 || | ||||||||||| | ||||||||||| |||||| Sbjct: 835 ataggagtagcagaactgggatgcataacaacggttta 798
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 137 bits (69), Expect = 3e-29 Identities = 123/141 (87%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 |||||||||||||||| || ||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 70475 agtatttgatcggggcaagaatctccagctgagatcccagcttctcctcggctgtcttct 70416 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 | |||||||| || ||||| ||||| ||||| ||||| || || | ||||||||||||| Sbjct: 70415 cagccttgacacgcagcttggccagttgcttcctcctctcataggcaaccttggccttct 70356 Query: 351 ccttcctcttttcctccagct 371 |||||||||| ||||| |||| Sbjct: 70355 ccttcctcttctcctcaagct 70335
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 119 bits (60), Expect = 7e-24 Identities = 117/136 (86%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 |||| ||||| ||||| || ||||||| ||||| ||||||||||||||||||||||||| Sbjct: 678 agtacttgataggggcaagaatctccaactgagaccccaacttctcctcggctgccttct 619 Query: 291 cggccttgacgcggagcttcgccagctgctttctcctgtcgtacgagaccttggccttct 350 |||||||||| || ||||| |||| ||||| |||| ||||| | ||||||||||||| Sbjct: 618 cggccttgacacgcagcttggccaattgcttcttcctctcgtaggcaaccttggccttct 559 Query: 351 ccttcctcttttcctc 366 |||||||||| ||||| Sbjct: 558 ccttcctcttctcctc 543
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 87.7 bits (44), Expect = 2e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 231 agtatttgatcggggccaggatctccagctgagttcccaacttctcctcggctgccttct 290 |||| ||||| ||||| || ||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1166 agtacttgataggggcaagaatctccaactgagaccccaacttctcctcggctgccttct 1107 Query: 291 cggccttgacgcggagcttcgcca 314 |||||||||| || ||||| |||| Sbjct: 1106 cggccttgacacgcagcttggcca 1083
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 305 agcttcgccagctgctttctcctgtcgtacgagaccttggccttctccttcctcttttcc 364 ||||| ||||||||||| ||||| || || | ||||| ||||||||||||||||| ||| Sbjct: 593 agcttggccagctgcttcctcctctcataggccaccttagccttctccttcctcttctcc 534 Query: 365 tccagct 371 || |||| Sbjct: 533 tcaagct 527
>gb|DQ200397.1| Solanum tuberosum clone 070F10 60S ribosomal protein L13a-like protein mRNA, complete cds Length = 848 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 271 cttctcctcggctgccttctcggccttgacgcggagcttcgccagctgctttctcctgtc 330 ||||||||| || |||||||||||||| || | ||| || |||| |||||||||||| || Sbjct: 618 cttctcctcagcagccttctcggccttaaccctgagtttggccaactgctttctcctctc 559 Query: 331 gta 333 ||| Sbjct: 558 gta 556
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||||||| |||||||| Sbjct: 416 cttggccttctccttcctcttctcctccag 387
>ref|XM_526928.1| PREDICTED: Pan troglodytes integrin alpha 2 (LOC471550), mRNA Length = 3000 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||||||| |||||||| Sbjct: 2883 cttggccttctccttcctcttctcctccag 2854
>ref|XM_514152.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC457684), mRNA Length = 663 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||||||| |||||||| Sbjct: 495 cttggccttctccttcctcttctcctccag 466
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||||||| |||||||| Sbjct: 81648 cttggccttctccttcctcttctcctccag 81677
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||||||| |||||||| Sbjct: 95042 cttggccttctccttcctcttctcctccag 95013
>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence Length = 190861 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||||||| |||||||| Sbjct: 188727 cttggccttctccttcctcttctcctccag 188756
>gb|AC003072.1|AC003072 Human BAC clone CTA-963H5 from 22q12.1-qter, complete sequence Length = 39401 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||||||| |||||||| Sbjct: 2080 cttggccttctccttcctcttctcctccag 2109
>gb|AY498745.1| Capsicum annuum 60S ribosomal protein L13a (RpL13a) mRNA, complete cds Length = 797 Score = 50.1 bits (25), Expect = 0.005 Identities = 83/101 (82%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 271 cttctcctcggctgccttctcggccttgacgcggagcttcgccagctgctttctcctgtc 330 |||||||||||| ||||| || ||||| || | ||| || ||||||||||||||||| || Sbjct: 644 cttctcctcggcagcctt-tcagccttaaccctgagtttggccagctgctttctcctctc 586 Query: 331 gtacgagaccttggccttctccttcctcttttcctccagct 371 || | ||||| ||| ||||||| ||||| ||||| |||| Sbjct: 585 ataagtgacctgggctctctcctttctcttgtcctcgagct 545
>gb|U18488.1|STU18488 Salmo trutta transplantation antigen mRNA, partial cds Length = 621 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctcca 368 ||||||||||||||||||||| ||||||| Sbjct: 455 cttggccttctccttcctcttctcctcca 427
>gb|AC140724.4| Mus musculus chromosome 8, clone RP24-291N1, complete sequence Length = 159182 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 144 taacacagagttaccaaactactt 167 |||||||||||||||||||||||| Sbjct: 85840 taacacagagttaccaaactactt 85817
>gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome 8, complete sequence Length = 176667 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 144 taacacagagttaccaaactactt 167 |||||||||||||||||||||||| Sbjct: 144654 taacacagagttaccaaactactt 144677
>gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome 13, complete sequence Length = 208578 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcc 367 ||||||||||||||||||||||| Sbjct: 164552 ccttctccttcctcttttcctcc 164530
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence Length = 176188 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 343 ggccttctccttcctcttttcctccag 369 |||||||||||||||||| |||||||| Sbjct: 137634 ggccttctccttcctcttctcctccag 137660
>gb|AC035139.11| Homo sapiens chromosome 10 clone RP11-563N6, complete sequence Length = 210472 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 343 ggccttctccttcctcttttcctccag 369 |||||||||||||||||| |||||||| Sbjct: 1517 ggccttctccttcctcttctcctccag 1543
>gb|AC022533.10| Homo sapiens chromosome 10 clone RP11-230D19, complete sequence Length = 174569 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 343 ggccttctccttcctcttttcctccag 369 |||||||||||||||||| |||||||| Sbjct: 136041 ggccttctccttcctcttctcctccag 136015
>gb|AC161811.6| Mus musculus chromosome 5, clone RP23-456E9, complete sequence Length = 163565 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcc 367 ||||||||||||||||||||||| Sbjct: 6106 ccttctccttcctcttttcctcc 6084
>emb|CT030185.11| Mouse DNA sequence from clone RP23-204L16 on chromosome 13, complete sequence Length = 116416 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcctcc 367 ||||||||||||||||||||||| Sbjct: 67988 ccttctccttcctcttttcctcc 68010
>gb|AC138365.16| Mus musculus chromosome 5, clone RP23-262B5, complete sequence Length = 172631 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcctcc 367 ||||||||||||||||||||||| Sbjct: 122336 ccttctccttcctcttttcctcc 122358
>ref|XM_520729.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465277), mRNA Length = 662 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||| |||||||||||||| |||||||| Sbjct: 514 cttggctttctccttcctcttctcctccag 485
>ref|XM_508935.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC451757), mRNA Length = 690 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||| ||||| |||||||| Sbjct: 423 cttggccttctcctttctcttctcctccag 394
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||| ||| |||||||| Sbjct: 499 cttggccttctccttccgcttctcctccag 470
>gb|DQ216003.1| Taeniopygia guttata clone 0058P0045E08 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||| ||| |||||||| Sbjct: 528 cttggccttctccttccgcttctcctccag 499
>gb|DQ216001.1| Taeniopygia guttata clone 0058P0049C02 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||| ||| |||||||| Sbjct: 528 cttggccttctccttccgcttctcctccag 499
>ref|XM_526130.1| PREDICTED: Pan troglodytes similar to APG7 autophagy 7-like; ubiquitin activating enzyme E1-like protein (LOC470747), mRNA Length = 2091 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||||||||| |||||||| |||||||| Sbjct: 169 cttggccttctcattcctcttctcctccag 198
>gb|AC167134.5| Mus musculus chromosome 1, clone RP23-59E7, complete sequence Length = 140039 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcctc 366 |||||||||||||||||||||| Sbjct: 36545 ccttctccttcctcttttcctc 36566
>ref|XM_533620.2| PREDICTED: Canis familiaris Ribosomal protein L13a (RPL13A), mRNA Length = 525 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||| ||||||||| |||||||| Sbjct: 372 cttggccttcttcttcctcttctcctccag 343
>gb|BC043976.1| Xenopus laevis ribosomal protein L13a, mRNA (cDNA clone MGC:54018 IMAGE:5571546), complete cds Length = 819 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||| ||||| |||||||| Sbjct: 584 cttggccttctcctttctcttctcctccag 555
>gb|AC166831.3| Mus musculus BAC clone RP23-270P14 from chromosome 16, complete sequence Length = 230269 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttt 361 |||||||||||||||||||||| Sbjct: 45570 cttggccttctccttcctcttt 45549
>emb|AL391822.12| Human DNA sequence from clone RP11-494K3 on chromosome 1 Contains the 3' end of the gene for neurofascin (NFASC) and a ribosomal protein L13a (RPL13A) pseudogene, complete sequence Length = 115292 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||| ||| |||||||||||||||| Sbjct: 35865 cttggccttttccctcctcttttcctccag 35836
>emb|AJ843089.1| Platichthys flesus mRNA for 60S ribosomal protein L13A (rpl13A gene) Length = 686 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||| ||||| |||||||| Sbjct: 522 cttggccttctcctttctcttctcctccag 493
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||| |||||||||||||| |||||||| Sbjct: 431 cttggctttctccttcctcttctcctccag 402
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence Length = 146364 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||| |||||||||||||| |||||||| Sbjct: 2917 cttggctttctccttcctcttctcctccag 2946
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||| ||||| |||||||| Sbjct: 518 cttggccttctcctttctcttctcctccag 489
>gb|AC084878.12| Homo sapiens 12q BAC RP11-101K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135060 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 |||| |||||||||||||||| |||||||| Sbjct: 77781 cttgaccttctccttcctcttctcctccag 77810
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||||| ||| |||||||| Sbjct: 60141 cttggccttctccttccacttctcctccag 60112
>gb|AC074250.6| Homo sapiens BAC clone RP11-622A1 from 4, complete sequence Length = 199331 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||| ||||||||| |||||||||||||| Sbjct: 37403 cttggtcttctcctttctcttttcctccag 37374
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||| |||||||||||||| |||||||| Sbjct: 430 cttggctttctccttcctcttctcctccag 401
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||| |||||||||||||| |||||||| Sbjct: 430 cttggctttctccttcctcttctcctccag 401
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||| ||||| |||||||| Sbjct: 1303 cttggccttctcctttctcttctcctccag 1274
>gb|AC129776.3| Mus musculus BAC clone RP23-197A15 from chromosome 16, complete sequence Length = 219345 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttt 361 |||||||||||||||||||||| Sbjct: 1434 cttggccttctccttcctcttt 1413
>ref|NG_002538.1| Homo sapiens ribosomal protein L13a pseudogene 2 (RPL13AP2) on chromosome 14 Length = 773 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcct 365 ||||||||||||||||||||| |||| Sbjct: 530 cttggccttctccttcctcttctcct 505
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence Length = 166507 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||| |||||||||||||| |||||||| Sbjct: 162299 cttggctttctccttcctcttctcctccag 162328
>gb|AC107675.13| Mus musculus chromosome 1, clone RP24-471N7, complete sequence Length = 127374 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctc 366 |||||||||||||||||||||| Sbjct: 43714 ccttctccttcctcttttcctc 43693
>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194760 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcct 365 ||||||||||||||||||||| |||| Sbjct: 115340 cttggccttctccttcctcttctcct 115365
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cttggccttctccttcctcttttcctccag 369 |||||| |||||||||||||| |||||||| Sbjct: 124955 cttggctttctccttcctcttctcctccag 124984
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctccag 369 ||||||||||||||| ||||| |||||||| Sbjct: 493 cttggccttctcctttctcttctcctccag 464
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctcca 368 |||||| |||||||||||||| ||||||| Sbjct: 366 cttggctttctccttcctcttctcctcca 338
>ref|NM_001016486.2| Xenopus tropicalis hypothetical protein LOC549240 (LOC549240), mRNA Length = 771 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctcca 368 ||||||||||||||| ||||| ||||||| Sbjct: 584 cttggccttctcctttctcttctcctcca 556
>ref|XM_456551.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A05302g) partial mRNA Length = 681 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ttcacaagaatcttcaaatgc 47 ||||||||||||||||||||| Sbjct: 252 ttcacaagaatcttcaaatgc 232
>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence Length = 189036 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 115153 cttggccttctccttcctctt 115133
>ref|XM_673595.1| Plasmodium berghei strain ANKA hypothetical protein (PB000517.00.0) partial mRNA Length = 6858 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 aatttcaaatgagggtagcagaact 108 |||||||||||||||||||| |||| Sbjct: 966 aatttcaaatgagggtagcacaact 990
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 50599 cttggccttctccttcctctt 50579
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 57020 cttggccttctccttcctctt 57000
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 33892 cttggccttctccttcctctt 33872
>emb|AL109827.8|HSJ309K20 Human DNA sequence from clone RP1-309K20 on chromosome 20 Contains the 5' end of the FER1L4 gene for fer-1-like 4 (C. elegans), the C20orf124 gene for chromosome 20 open reading frame 124, the SPAG4 gene for sperm associated antigen 4, the CPNE1 gene for copine I, the RBM12 gene for RNA binding motif protein 12, the 3' end of the NIFS gene for nitrogen fixation 1 (S. cerevisiae) and four CpG islands, complete sequence Length = 98599 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcct 365 ||||||||||||||||||||| Sbjct: 86556 ccttctccttcctcttttcct 86576
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ttcacaagaatcttcaaatgc 47 ||||||||||||||||||||| Sbjct: 426048 ttcacaagaatcttcaaatgc 426028
>emb|CR759766.5| Human DNA sequence from clone DAMA-BMC177C8 on chromosome 6, complete sequence Length = 127280 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 28918 cttggccttctccttcctctt 28898
>emb|CR759870.6| Human DNA sequence from clone DADB-225M10 on chromosome 6, complete sequence Length = 57743 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 5744 cttggccttctccttcctctt 5724
>emb|CR788300.6| Human DNA sequence from clone DAAP-188P13 on chromosome 6, complete sequence Length = 78908 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 54303 cttggccttctccttcctctt 54283
>gb|AC161626.6| Pan troglodytes BAC clone CH251-114C24 from chromosome unknown, complete sequence Length = 167136 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcct 365 ||||||||||||||||||||| Sbjct: 139866 ccttctccttcctcttttcct 139886
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 206963 cttggccttctccttcctctt 206943
>ref|NM_203308.1| Homo sapiens ribosomal protein L13A-like (MGC34774), mRNA Length = 1848 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 1096 cttggccttctccttcctctt 1076
>gb|AC006137.3|AC006137 Homo sapiens clone SCb-254N2 (UWGC:rg254N02) from 6p21, complete sequence Length = 129806 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 74304 cttggccttctccttcctctt 74324
>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete sequence Length = 83649 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 76920 cttggccttctccttcctctt 76900
>dbj|AB168305.1| Macaca fascicularis testis cDNA clone: QtsA-11103, similar to human ribosomal protein L13a (RPL13A), mRNA, RefSeq: NM_012423.2 Length = 680 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctcca 368 |||||| |||||||||||||| ||||||| Sbjct: 517 cttggctttctccttcctcttctcctcca 489
>gb|AC091989.3| Homo sapiens chromosome 5 clone RP11-76H13, complete sequence Length = 168575 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 ttctccttcctcttttcctcc 367 ||||||||||||||||||||| Sbjct: 89242 ttctccttcctcttttcctcc 89262
>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete sequence Length = 185838 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 9142 cttggccttctccttcctctt 9122
>gb|AC148689.1| Macaca mulatta Major Histocompatibility Complex BAC MMU222I18, complete sequence Length = 174202 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 106204 cttggccttctccttcctctt 106184
>gb|AY855164.1| Callithrix jacchus RPGR mRNA, partial cds Length = 1818 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcct 365 ||||||||||||||||||||| Sbjct: 554 ccttctccttcctcttttcct 534
>gb|BC027852.1| Homo sapiens ribosomal protein L13A-like, mRNA (cDNA clone MGC:34774 IMAGE:5207622), complete cds Length = 1848 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 1096 cttggccttctccttcctctt 1076
>emb|CR760846.2| Xenopus tropicalis finished cDNA, clone TTpA004d22 Length = 771 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 cttggccttctccttcctcttttcctcca 368 ||||||||||||||| ||||| ||||||| Sbjct: 584 cttggccttctcctttctcttctcctcca 556
>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2 Contains a MAS1 oncogene pseudogene, the OR2H2 gene for olfactory receptor 2H2, olfactory receptor 2I1 and 2H5 pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin, an RPL13A (60S Ribosomal Protein L13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor 1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3, yeast) homolog) pseudogene and three CpG islands, complete sequence Length = 134292 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctctt 360 ||||||||||||||||||||| Sbjct: 79300 cttggccttctccttcctctt 79280
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 317 tgctttctcctgtcgtacgagaccttggccttctccttcctcttttcctcca 368 ||||| ||||| ||||| | ||||| ||||||||||| ||||| ||||||| Sbjct: 617 tgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctcca 566
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 317 tgctttctcctgtcgtacgagaccttggccttctccttcctcttttcctcca 368 ||||| ||||| ||||| | ||||| ||||||||||| ||||| ||||||| Sbjct: 621 tgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctcca 570
>gb|AC099743.3| Papio anubis clone RP41-450I16, complete sequence Length = 115022 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ttctccttcctcttttcctc 366 |||||||||||||||||||| Sbjct: 71049 ttctccttcctcttttcctc 71030
>gb|AC115061.20| Mus musculus chromosome 1, clone RP24-399G3, complete sequence Length = 203058 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ctccttcctcttttcctcca 368 |||||||||||||||||||| Sbjct: 159848 ctccttcctcttttcctcca 159867
>gb|AC126115.5| Rattus norvegicus 4 BAC CH230-213L22 (Children's Hospital Oakland Research Institute) complete sequence Length = 214442 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cttctccttcctcttttcct 365 |||||||||||||||||||| Sbjct: 190669 cttctccttcctcttttcct 190650
>gb|BC052385.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:57944 IMAGE:5703859), complete cds Length = 3018 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 2014 ccttctccttcctcttctcctcca 1991
>ref|NM_026539.1| Mus musculus chromodomain helicase DNA binding protein 1-like (Chd1l), mRNA Length = 2991 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 2032 ccttctccttcctcttctcctcca 2009
>gb|AC146171.2| Pan troglodytes BAC clone RP43-24K1 from 7, complete sequence Length = 131575 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ttctccttcctcttttcctc 366 |||||||||||||||||||| Sbjct: 90410 ttctccttcctcttttcctc 90391
>ref|XR_002787.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 338 accttggccttctccttcctcttttcctccag 369 ||||||||||||||||||| || |||||||| Sbjct: 517 accttggccttctccttccgtttctcctccag 486
>ref|XR_004732.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 338 accttggccttctccttcctcttttcctccag 369 ||||||||||||||||||| || |||||||| Sbjct: 517 accttggccttctccttccgtttctcctccag 486
>gb|AC146025.2| Pan troglodytes BAC clone RP43-119E9 from 7, complete sequence Length = 156630 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ttctccttcctcttttcctc 366 |||||||||||||||||||| Sbjct: 5631 ttctccttcctcttttcctc 5650
>ref|XM_568754.1| Cryptococcus neoformans var. neoformans JEC21 exonuclease (CNB00080) partial mRNA Length = 3126 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 cttggccttctccttcctct 359 |||||||||||||||||||| Sbjct: 2118 cttggccttctccttcctct 2099
>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete sequence Length = 191814 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 25560 ccttctccttcctcttctcctcca 25583
>gb|AC134901.4| Mus musculus BAC clone RP23-287E23 from chromosome 18, complete sequence Length = 188224 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcc 364 |||||||||||||||||||| Sbjct: 141000 ccttctccttcctcttttcc 141019
>gb|AC122213.4| Mus musculus BAC clone RP23-104C8 from chromosome 18, complete sequence Length = 188125 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ccttctccttcctcttttcc 364 |||||||||||||||||||| Sbjct: 5787 ccttctccttcctcttttcc 5806
>gb|BC020486.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone IMAGE:3708149) Length = 1179 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 202 ccttctccttcctcttctcctcca 179
>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence Length = 184989 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cttcctcttttcctccagct 371 |||||||||||||||||||| Sbjct: 16646 cttcctcttttcctccagct 16627
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 gccttctccttcctcttttcctcc 367 ||||||||||||||||| |||||| Sbjct: 60994 gccttctccttcctcttctcctcc 61017
>emb|CR727990.2|CNS0GONW Tetraodon nigroviridis full-length cDNA Length = 1347 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 cttctccttcctcttttcctccag 369 |||||||||||||| ||||||||| Sbjct: 244 cttctccttcctctcttcctccag 221
>emb|AL590092.6| Human DNA sequence from clone RP11-237C19 on chromosome 1, complete sequence Length = 109470 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ttcaaatgcacacatttgat 58 |||||||||||||||||||| Sbjct: 19823 ttcaaatgcacacatttgat 19842
>ref|XM_504032.1| Yarrowia lipolytica CLIB122, YALI0E16665g predicted mRNA Length = 762 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tctcctcggctgccttctcggcct 296 |||||| ||||||||||||||||| Sbjct: 574 tctccttggctgccttctcggcct 551
>gb|BC057567.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:66868 IMAGE:6415898), complete cds Length = 3037 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 2043 ccttctccttcctcttctcctcca 2020
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cttggccttctccttcctct 359 |||||||||||||||||||| Sbjct: 20767 cttggccttctccttcctct 20786
>gb|AC104232.5| Homo sapiens chromosome 8, clone RP11-1D12, complete sequence Length = 148933 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 aacagttgaccaagtagaaa 84 |||||||||||||||||||| Sbjct: 119755 aacagttgaccaagtagaaa 119736
>ref|NM_079920.2| Drosophila melanogaster gomdanji CG6727-RA (gom), mRNA Length = 1286 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gaccttggccttctccttcc 356 |||||||||||||||||||| Sbjct: 951 gaccttggccttctccttcc 932
>gb|AC010265.5| Homo sapiens chromosome 5 clone CTC-470E21, complete sequence Length = 126619 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gccttctccttcctcttttc 363 |||||||||||||||||||| Sbjct: 126394 gccttctccttcctcttttc 126413
>gb|AC104126.2| Homo sapiens chromosome 5 clone RP11-526F3, complete sequence Length = 187914 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gccttctccttcctcttttc 363 |||||||||||||||||||| Sbjct: 146002 gccttctccttcctcttttc 145983
>dbj|AK165656.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched library, clone:G430108O15 product:chromodomain helicase DNA binding protein 1-like, full insert sequence Length = 2716 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 2057 ccttctccttcctcttctcctcca 2034
>gb|AC060766.8| Homo sapiens chromosome 17, clone RP11-686D22, complete sequence Length = 169675 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cttcctcttttcctccagct 371 |||||||||||||||||||| Sbjct: 72744 cttcctcttttcctccagct 72763
>gb|AC099019.1| Drosophila melanogaster, chromosome 2R, region 58C-58D, BAC clone BACR02O12, complete sequence Length = 171594 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gaccttggccttctccttcc 356 |||||||||||||||||||| Sbjct: 105322 gaccttggccttctccttcc 105341
>gb|AC073850.4| Homo sapiens BAC clone RP11-697H17 from 7, complete sequence Length = 183846 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ttctccttcctcttttcctc 366 |||||||||||||||||||| Sbjct: 84785 ttctccttcctcttttcctc 84804
>gb|AC182810.1| Gasterosteus aculeatus clone VMRC28-119K03, complete sequence Length = 131913 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tctccttcctcttttcctcc 367 |||||||||||||||||||| Sbjct: 85845 tctccttcctcttttcctcc 85826
>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence Length = 177867 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 338 accttggccttctccttcctcttttcctccag 369 ||||||||||||||||||| || |||||||| Sbjct: 124043 accttggccttctccttccgtttctcctccag 124074
>gb|S48758.1| cyclin B [goldfish, oocytes, mRNA, 1425 nt] Length = 1425 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cagaggtttcccaaaactga 203 |||||||||||||||||||| Sbjct: 815 cagaggtttcccaaaactga 796
>gb|AC154231.2| Mus musculus BAC clone RP24-339I11 from chromosome 13, complete sequence Length = 141075 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tctccttcctcttttcctcc 367 |||||||||||||||||||| Sbjct: 128514 tctccttcctcttttcctcc 128495
>gb|BC066506.1| Danio rerio tropomyosin 1 (alpha), mRNA (cDNA clone MGC:77009 IMAGE:6805687), complete cds Length = 1719 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tctcctcggctgccttctcggcct 296 |||| ||||||||||||||||||| Sbjct: 441 tctcatcggctgccttctcggcct 418
>gb|BC045504.1| Danio rerio tropomyosin 1 (alpha), mRNA (cDNA clone MGC:55951 IMAGE:3819329), complete cds Length = 1217 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tctcctcggctgccttctcggcct 296 |||| ||||||||||||||||||| Sbjct: 436 tctcatcggctgccttctcggcct 413
>dbj|AK014473.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432404A22 product:CDNA FLJ10480 FIS, CLONE NT2RP2000126, WEAKLY SIMILAR TO POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 2991 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 2032 ccttctccttcctcttctcctcca 2009
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ctccttcctcttttcctcca 368 |||||||||||||||||||| Sbjct: 11624105 ctccttcctcttttcctcca 11624124
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 317 tgctttctcctgtcgtacgagaccttggccttctccttcctcttttcctcca 368 ||||| ||||| ||||| | ||||| ||||||||||| ||||| ||||||| Sbjct: 523008 tgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctcca 523059
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cttctccttcctcttttcct 365 |||||||||||||||||||| Sbjct: 198344 cttctccttcctcttttcct 198325
>gb|AC147097.3| Pan troglodytes BAC clone RP43-51D4 from chromosome 7, complete sequence Length = 192069 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ttctccttcctcttttcctc 366 |||||||||||||||||||| Sbjct: 113065 ttctccttcctcttttcctc 113084
>gb|AC017048.6| Homo sapiens BAC clone RP11-324L17 from 2, complete sequence Length = 186373 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctccttcctcttttcctcc 367 |||||||||||||||||||| Sbjct: 96960 tctccttcctcttttcctcc 96979
>gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, complete sequence Length = 209613 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ctccttcctcttttcctcca 368 |||||||||||||||||||| Sbjct: 11613 ctccttcctcttttcctcca 11632
>ref|XM_342921.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 9330177P20 (LOC362602), mRNA Length = 2967 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gctgccttctcggccttgac 300 |||||||||||||||||||| Sbjct: 2845 gctgccttctcggccttgac 2864
>gb|AC136603.3| Homo sapiens chromosome 16 clone RP11-133M8, complete sequence Length = 183708 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ggccttctccttcctctttt 362 |||||||||||||||||||| Sbjct: 132624 ggccttctccttcctctttt 132643
>gb|AC009141.7| Homo sapiens chromosome 16 clone RP11-543G23, complete sequence Length = 201716 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ggccttctccttcctctttt 362 |||||||||||||||||||| Sbjct: 60081 ggccttctccttcctctttt 60100
>gb|AF273495.1|AF273495 Carassius auratus cyclin B mRNA, complete cds Length = 1501 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cagaggtttcccaaaactga 203 |||||||||||||||||||| Sbjct: 877 cagaggtttcccaaaactga 858
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 317 tgctttctcctgtcgtacgagaccttggccttctccttcctcttttcctcca 368 ||||| ||||| ||||| | ||||| ||||||||||| ||||| ||||||| Sbjct: 125172 tgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctcca 125223
>emb|AL671536.8| Mouse DNA sequence from clone RP23-291O10 on chromosome X, complete sequence Length = 221255 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cttctccttcctcttttcct 365 |||||||||||||||||||| Sbjct: 171830 cttctccttcctcttttcct 171811
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 317 tgctttctcctgtcgtacgagaccttggccttctccttcctcttttcctcca 368 ||||| ||||| ||||| | ||||| ||||||||||| ||||| ||||||| Sbjct: 617 tgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctcca 566
>gb|AF045470.1|AF045470 Drosophila melanogaster Gom (gom) mRNA, complete cds Length = 1248 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gaccttggccttctccttcc 356 |||||||||||||||||||| Sbjct: 951 gaccttggccttctccttcc 932
>gb|AC151896.3| Mus musculus BAC clone RP24-501F15 from 18, complete sequence Length = 189528 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 agctctgatctctcttagtatttg 238 |||||||||||||||| ||||||| Sbjct: 30953 agctctgatctctcttggtatttg 30976
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 317 tgctttctcctgtcgtacgagaccttggccttctccttcctcttttcctcca 368 ||||| ||||| ||||| | ||||| ||||||||||| ||||| ||||||| Sbjct: 621 tgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctcca 570
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 317 tgctttctcctgtcgtacgagaccttggccttctccttcctcttttcctcca 368 ||||| ||||| ||||| | ||||| ||||||||||| ||||| ||||||| Sbjct: 76920 tgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctcca 76971
>gb|AE003456.3| Drosophila melanogaster chromosome 2R, section 64 of 73 of the complete sequence Length = 288451 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gaccttggccttctccttcc 356 |||||||||||||||||||| Sbjct: 142904 gaccttggccttctccttcc 142885
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 69068 ccttctccttcctcttctcctcca 69045
>gb|AC146916.3| Rattus norvegicus strain Brown Norway clone CH230-206L9, complete sequence Length = 215015 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cttctccttcctcttttcct 365 |||||||||||||||||||| Sbjct: 198344 cttctccttcctcttttcct 198325
>gb|AC154565.2| Mus musculus BAC clone RP23-403J19 from chromosome 16, complete sequence Length = 202981 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cttcctcttttcctccagct 371 |||||||||||||||||||| Sbjct: 9546 cttcctcttttcctccagct 9565
>ref|NM_200934.2| Danio rerio tropomyosin 1 (alpha) (tpm1), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tctcctcggctgccttctcggcct 296 |||| ||||||||||||||||||| Sbjct: 441 tctcatcggctgccttctcggcct 418
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ctccttcctcttttcctcca 368 |||||||||||||||||||| Sbjct: 11623776 ctccttcctcttttcctcca 11623795
>emb|AL772424.5|CNS08CA2 Oryza sativa chromosome 12, . BAC OJ1118_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108927 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ctccttcctcttttcctcca 368 |||||||||||||||||||| Sbjct: 36723 ctccttcctcttttcctcca 36704
>gb|AC003054.1|AC003054 Drosophila melanogaster DNA sequence (P1 DS04894 (D86)), complete sequence Length = 47334 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gaccttggccttctccttcc 356 |||||||||||||||||||| Sbjct: 22509 gaccttggccttctccttcc 22490
>gb|BC062966.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:64788 IMAGE:6415898), complete cds Length = 3066 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ccttctccttcctcttttcctcca 368 |||||||||||||||| ||||||| Sbjct: 2043 ccttctccttcctcttctcctcca 2020
>emb|CR974477.12| Pig DNA sequence from clone CH242-217L7 on chromosome 17, complete sequence Length = 204661 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 ctccttcctcttttcctccagctt 372 |||||||||||| ||||||||||| Sbjct: 73127 ctccttcctcttctcctccagctt 73150
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tctcctcggctgccttctcggcct 296 |||||| ||||||||||||||||| Sbjct: 1975373 tctccttggctgccttctcggcct 1975350
>gb|AC171072.2| Rhesus Macaque CHR7 BAC CH250-508E7 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 165491 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ttctccttcctcttttcctc 366 |||||||||||||||||||| Sbjct: 44040 ttctccttcctcttttcctc 44021 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,003,372 Number of Sequences: 3902068 Number of extensions: 4003372 Number of successful extensions: 117383 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116943 Number of HSP's gapped (non-prelim): 427 length of query: 372 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 350 effective length of database: 17,147,199,772 effective search space: 6001519920200 effective search space used: 6001519920200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
