>YICO_ECOLI (P31440) Inner membrane protein yicO|
          Length = 470

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 149 LPVVYFAGLDGSMGVFFFLVGTFNSGVEYNNNTTIVM 39
           +P+    G+   +G+F  L+G  N+GV   N  T+VM
Sbjct: 167 IPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVM 203

>ANKS3_RAT (Q5M9H0) Ankyrin repeat and SAM domain-containing protein 3|
          Length = 663

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 37  HMTIVVLLLYSTPELNVPTKKKKTPIL 117
           H TIV LLL +   +NVPT + +TP++
Sbjct: 81  HDTIVHLLLEAGVSVNVPTPEGQTPLM 107

>ANKS3_MOUSE (Q9CZK6) Ankyrin repeat and SAM domain-containing protein 3|
          Length = 655

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 37  HMTIVVLLLYSTPELNVPTKKKKTPIL 117
           H TIV LLL +   +NVPT + +TP++
Sbjct: 81  HDTIVHLLLEAGVSVNVPTPEGQTPLM 107

>ANKS3_HUMAN (Q6ZW76) Ankyrin repeat and SAM domain-containing protein 3|
          Length = 656

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 37  HMTIVVLLLYSTPELNVPTKKKKTPIL 117
           H TIV LLL +   +NVPT + +TP++
Sbjct: 81  HDTIVHLLLEAGVSVNVPTPEGQTPLM 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,475,471
Number of Sequences: 219361
Number of extensions: 624136
Number of successful extensions: 1756
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)