>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 89/104 (85%), Gaps = 4/104 (3%)
 Strand = Plus / Plus

                                                                            
Query: 124      acatagacaaatataagttaaatcctgcatgtgtatagtatgatcaacatcacagggagg 183
                ||||||| ||||||| | |||||||||||| |||||||||||| | |||||| | |||||
Sbjct: 35864926 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 35864984

                                                            
Query: 184      agaaactgaacaggtagggctgcatttcctgtcatcatgtatcc 227
                ||||| |||||||||  ||||| ||||||   ||||||||||||
Sbjct: 35864985 agaaattgaacaggtcaggctgtatttcc---catcatgtatcc 35865025



 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 92      agaaataaacagaagtgaaga 112
               |||||||||||||||||||||
Sbjct: 7977120 agaaataaacagaagtgaaga 7977100

>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 89/104 (85%), Gaps = 4/104 (3%)
 Strand = Plus / Plus

                                                                          
Query: 124    acatagacaaatataagttaaatcctgcatgtgtatagtatgatcaacatcacagggagg 183
              ||||||| ||||||| | |||||||||||| |||||||||||| | |||||| | |||||
Sbjct: 129384 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 129442

                                                          
Query: 184    agaaactgaacaggtagggctgcatttcctgtcatcatgtatcc 227
              ||||| |||||||||  ||||| ||||||   ||||||||||||
Sbjct: 129443 agaaattgaacaggtcaggctgtatttcc---catcatgtatcc 129483

>dbj|AK119783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F04, full
            insert sequence
          Length = 1678

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 89/104 (85%), Gaps = 4/104 (3%)
 Strand = Plus / Minus

                                                                        
Query: 124  acatagacaaatataagttaaatcctgcatgtgtatagtatgatcaacatcacagggagg 183
            ||||||| ||||||| | |||||||||||| |||||||||||| | |||||| | |||||
Sbjct: 1531 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1473

                                                        
Query: 184  agaaactgaacaggtagggctgcatttcctgtcatcatgtatcc 227
            ||||| |||||||||  ||||| ||||||   ||||||||||||
Sbjct: 1472 agaaattgaacaggtcaggctgtatttcc---catcatgtatcc 1432

>dbj|AK106145.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H02, full
            insert sequence
          Length = 1599

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 89/104 (85%), Gaps = 4/104 (3%)
 Strand = Plus / Minus

                                                                        
Query: 124  acatagacaaatataagttaaatcctgcatgtgtatagtatgatcaacatcacagggagg 183
            ||||||| ||||||| | |||||||||||| |||||||||||| | |||||| | |||||
Sbjct: 1492 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1434

                                                        
Query: 184  agaaactgaacaggtagggctgcatttcctgtcatcatgtatcc 227
            ||||| |||||||||  ||||| ||||||   ||||||||||||
Sbjct: 1433 agaaattgaacaggtcaggctgtatttcc---catcatgtatcc 1393

>dbj|AK098958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063N02, full
            insert sequence
          Length = 1656

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 89/104 (85%), Gaps = 4/104 (3%)
 Strand = Plus / Minus

                                                                        
Query: 124  acatagacaaatataagttaaatcctgcatgtgtatagtatgatcaacatcacagggagg 183
            ||||||| ||||||| | |||||||||||| |||||||||||| | |||||| | |||||
Sbjct: 1532 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1474

                                                        
Query: 184  agaaactgaacaggtagggctgcatttcctgtcatcatgtatcc 227
            ||||| |||||||||  ||||| ||||||   ||||||||||||
Sbjct: 1473 agaaattgaacaggtcaggctgtatttcc---catcatgtatcc 1433

>dbj|AK066629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071A10, full
            insert sequence
          Length = 1745

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 89/104 (85%), Gaps = 4/104 (3%)
 Strand = Plus / Minus

                                                                        
Query: 124  acatagacaaatataagttaaatcctgcatgtgtatagtatgatcaacatcacagggagg 183
            ||||||| ||||||| | |||||||||||| |||||||||||| | |||||| | |||||
Sbjct: 1533 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1475

                                                        
Query: 184  agaaactgaacaggtagggctgcatttcctgtcatcatgtatcc 227
            ||||| |||||||||  ||||| ||||||   ||||||||||||
Sbjct: 1474 agaaattgaacaggtcaggctgtatttcc---catcatgtatcc 1434

>dbj|AK061720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A01, full
            insert sequence
          Length = 1599

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 89/104 (85%), Gaps = 4/104 (3%)
 Strand = Plus / Minus

                                                                        
Query: 124  acatagacaaatataagttaaatcctgcatgtgtatagtatgatcaacatcacagggagg 183
            ||||||| ||||||| | |||||||||||| |||||||||||| | |||||| | |||||
Sbjct: 1492 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1434

                                                        
Query: 184  agaaactgaacaggtagggctgcatttcctgtcatcatgtatcc 227
            ||||| |||||||||  ||||| ||||||   ||||||||||||
Sbjct: 1433 agaaattgaacaggtcaggctgtatttcc---catcatgtatcc 1393

>gb|AY110073.1| Zea mays CL26733_1 mRNA sequence
          Length = 731

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 108 gaagatttaccacagtacatagacaaatataagttaaatcctgcatgtgtatagtatgat 167
           |||||||||||||| ||| |||||| |||| || |||| |||| || |||||||||||||
Sbjct: 86  gaagatttaccacaatacgtagacatatattagctaaaccctgaatctgtatagtatgat 145

                     
Query: 168 caacatcaca 177
           ||||||||||
Sbjct: 146 caacatcaca 155

>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence
          Length = 205069

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 91     aagaaataaacagaagtgaagatt 114
              ||||||||||||||||||||||||
Sbjct: 102170 aagaaataaacagaagtgaagatt 102147

>gb|AC148447.3| Pan troglodytes chromosome X clone RP43-041A20 map human ortholog p11.3,
              complete sequence
          Length = 210474

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 91     aagaaataaacagaagtgaag 111
              |||||||||||||||||||||
Sbjct: 174420 aagaaataaacagaagtgaag 174400

>emb|AL034370.1|HSA218J18 Human DNA sequence from clone RP6-218J18 on chromosome Xp11.3-11.4
              Contains the NDP gene for norrie disease (pseudoglioma),  a
              RNA-binding region (RNP1, RRM) containing 2 (RNPC2)
              pseudogene, a novel gene and a CpG island, complete
              sequence
          Length = 119945

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 91     aagaaataaacagaagtgaag 111
              |||||||||||||||||||||
Sbjct: 103568 aagaaataaacagaagtgaag 103548

>gb|AC163734.3| Pan troglodytes BAC clone CH251-558I15 from chromosome unknown,
             complete sequence
          Length = 157458

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    aagaaataaacagaagtgaag 111
             |||||||||||||||||||||
Sbjct: 16864 aagaaataaacagaagtgaag 16844

>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1008C01
          Length = 144141

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    agaaataaacagaagtgaaga 112
             |||||||||||||||||||||
Sbjct: 83432 agaaataaacagaagtgaaga 83412

>ref|NM_197612.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0001O14.12), mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  tcctgcatgtgtatagtatg 165
            ||||||||||||||||||||
Sbjct: 1150 tcctgcatgtgtatagtatg 1169

>gb|AC159321.3| Mus musculus BAC clone RP23-18G14 from chromosome 6, complete sequence
          Length = 202584

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     agctaaaagaaataaacaga 104
              ||||||||||||||||||||
Sbjct: 189271 agctaaaagaaataaacaga 189252

>gb|AC103934.10| Mus musculus chromosome 6, clone RP23-287O14, complete sequence
          Length = 208817

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     agctaaaagaaataaacaga 104
              ||||||||||||||||||||
Sbjct: 163153 agctaaaagaaataaacaga 163134

>gb|AC125399.3| Mus musculus BAC clone RP24-245C15 from chromosome 14, complete sequence
          Length = 195425

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     aaaagaaataaacagaagtg 108
              ||||||||||||||||||||
Sbjct: 127337 aaaagaaataaacagaagtg 127318

>emb|AL583808.6| Human DNA sequence from clone RP11-262K1 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 174642

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   agtacatagacaaatataag 140
             ||||||||||||||||||||
Sbjct: 41904 agtacatagacaaatataag 41885

>emb|AL117350.12|HSJ803J11 Human DNA sequence from clone RP4-803J11 on chromosome 1 Contains the
             3' end of the RAB4A gene for RAB4A, member RAS oncogene
             family, a  novel gene, a novel gene (LOC126731) and a CpG
             island, complete sequence
          Length = 106441

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    gcaacatttgaagctaaaagaaat 97
             |||||||| |||||||||||||||
Sbjct: 16800 gcaacattggaagctaaaagaaat 16823

>emb|X95989.1|DASRASECE D.ambivalens ORF1 and ORF2, sra & secE genes
          Length = 2331

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  taaacagaagtgaagattta 116
           ||||||||||||||||||||
Sbjct: 506 taaacagaagtgaagattta 525

>emb|AL731818.6| Mouse DNA sequence from clone RP23-401L13 on chromosome 11 Contains two
             novel genes, the AI503894 gene for expressed sequence
             AI503894, a laminin receptor 1 (ribosomal protein
             SA)(Lamr1) pseudogene and a CpG island, complete sequence
          Length = 201664

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aagttaaatcctgcatgtgt 157
             ||||||||||||||||||||
Sbjct: 67849 aagttaaatcctgcatgtgt 67868

>gb|AC026367.14| Homo sapiens 12 BAC RP11-131L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181445

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 73     ggcaacatttgaagctaaaagaaataaa 100
              ||||||||| ||||||||||| ||||||
Sbjct: 160076 ggcaacattggaagctaaaagcaataaa 160049

>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
             sequence
          Length = 178022

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tcctgcatgtgtatagtatg 165
             ||||||||||||||||||||
Sbjct: 62485 tcctgcatgtgtatagtatg 62504

>emb|BX248115.12| Zebrafish DNA sequence from clone CH211-208K15 in linkage group 16,
              complete sequence
          Length = 211852

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    acagtacatagacaaatata 138
              ||||||||||||||||||||
Sbjct: 197600 acagtacatagacaaatata 197581

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 146      tcctgcatgtgtatagtatg 165
                ||||||||||||||||||||
Sbjct: 20800086 tcctgcatgtgtatagtatg 20800105

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 92       agaaataaacagaagtgaag 111
                ||||||||||||||||||||
Sbjct: 18674023 agaaataaacagaagtgaag 18674042

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 116     accacagtacatagacaaatataa 139
               |||||||||||||| |||||||||
Sbjct: 8519472 accacagtacatagtcaaatataa 8519495

>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1197_D06
          Length = 103844

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    agaaataaacagaagtgaag 111
             ||||||||||||||||||||
Sbjct: 99077 agaaataaacagaagtgaag 99096

>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0055I24
          Length = 155872

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   agaaataaacagaagtgaag 111
            ||||||||||||||||||||
Sbjct: 6311 agaaataaacagaagtgaag 6330

>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1113_G05
          Length = 131445

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   accacagtacatagacaaatataa 139
             |||||||||||||| |||||||||
Sbjct: 68742 accacagtacatagtcaaatataa 68765

>dbj|AK065073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K10, full
            insert sequence
          Length = 3470

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 116  accacagtacatagacaaatataa 139
            |||||||||||||| |||||||||
Sbjct: 1868 accacagtacatagtcaaatataa 1891

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 146      tcctgcatgtgtatagtatg 165
                ||||||||||||||||||||
Sbjct: 20811350 tcctgcatgtgtatagtatg 20811369


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,864,593
Number of Sequences: 3902068
Number of extensions: 2864593
Number of successful extensions: 59311
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59178
Number of HSP's gapped (non-prelim): 133
length of query: 261
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 239
effective length of database: 17,147,199,772
effective search space: 4098180745508
effective search space used: 4098180745508
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)