ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast13c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016654.1| Zea mays clone Contig487 mRNA sequence 101 2e-18
2gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence 101 2e-18
3emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 101 2e-18
4dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
5ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA 100 7e-18
6ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA 100 7e-18
7gb|BT016442.1| Zea mays clone Contig275 mRNA sequence 100 7e-18
8gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence 100 7e-18
9gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence 100 7e-18
10dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
11dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
12ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predic... 98 3e-17
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 98 3e-17
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
15gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome... 98 3e-17
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
17dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
18emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene 92 2e-15
19ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA 90 7e-15
20gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence 90 7e-15
21emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene 90 7e-15
22dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 7e-15
23ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA 84 4e-13
24gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA,... 82 2e-12
25ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA 70 6e-09
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
27dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
28dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
29dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
30dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
31dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
32gb|DQ083207.1| Oryza sativa (indica cultivar-group) clone 6S8A23... 64 4e-07
33gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence 54 4e-04
34ref|NM_129462.2| Arabidopsis thaliana unknown protein AT2G39050 ... 40 5.5
35gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, com... 40 5.5
36emb|AL136992.22| Human DNA sequence from clone RP11-400P21 on ch... 40 5.5
37emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome;... 40 5.5
38gb|AY118445.1| Drosophila melanogaster SD10002 full insert cDNA 40 5.5
39ref|NM_170106.2| Drosophila melanogaster CG5902-RB, transcript v... 40 5.5
40gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, com... 40 5.5
41dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 5.5
42ref|NM_142944.2| Drosophila melanogaster CG5902-RA, transcript v... 40 5.5
43gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map ... 40 5.5
44gb|AY093795.1| Arabidopsis thaliana At2g39050/T7F6.22 mRNA, comp... 40 5.5
45gb|AF411801.1|AF411801 Arabidopsis thaliana At2g39050/T7F6.22 mR... 40 5.5
46gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosom... 40 5.5
47gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, r... 40 5.5
48emb|BX819436.1|CNS0A8S2 Arabidopsis thaliana Full-length cDNA Co... 40 5.5
49gb|AC008202.4|AC008202 Drosophila melanogaster, chromosome 3R, r... 40 5.5
50gb|AY087909.1| Arabidopsis thaliana clone 39558 mRNA, complete s... 40 5.5
51gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, comp... 40 5.5
52gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83... 40 5.5
53gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complet... 40 5.5
54emb|AL627073.15| Mouse DNA sequence from clone RP23-234E14 on ch... 40 5.5 
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence
          Length = 905

 Score =  101 bits (51), Expect = 2e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 360 taccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagca 504
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>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence
          Length = 567

 Score =  101 bits (51), Expect = 2e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 360 taccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagca 188
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>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1
          Length = 1458

 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                       
Query: 355  gcatctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagc 413
            |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 gcatttaccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagc 1055



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |  ||||| ||||||||
Sbjct: 599 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagca 547
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>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full
            insert sequence
          Length = 1765

 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                       
Query: 355  gcatctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagc 413
            |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 gcatttaccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagc 1068



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |  ||||| ||||||||
Sbjct: 612 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagca 560
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>ref|XM_479572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1239

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                     
Query: 357 atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 899 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagca 842



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 375 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagca 323
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>ref|XM_479571.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1511

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                      
Query: 357  atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1114 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagca 1057



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 590 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagca 538
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>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence
          Length = 1443

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 53/54 (98%)
 Strand = Plus / Minus

                                                                  
Query: 361  accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 accaagggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 1014



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 369 aggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           ||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 561 aggatcttccagctctggttgtcgcccttgcaccactcccagagca 516
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>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence
          Length = 690

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 53/54 (98%)
 Strand = Plus / Minus

                                                                 
Query: 361 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 accaagggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 266
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>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence
          Length = 842

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 53/54 (98%)
 Strand = Plus / Minus

                                                                 
Query: 361 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accaagggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 448
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>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full
            insert sequence
          Length = 1512

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                      
Query: 357  atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1114 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagca 1057



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 590 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagca 538
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>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full
           insert sequence
          Length = 1239

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                     
Query: 357 atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 899 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagca 842



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 375 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagca 323
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>ref|NM_187532.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1122

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Minus

                                                                 
Query: 361  accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagc 413
            ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagc 993



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |  ||||| ||||||||
Sbjct: 537 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagca 485
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                     
Query: 361      accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagc 413
                ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11931354 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagc 11931406



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 362      ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
                |||||||||||||||||||| |||||||||||||| |  ||||| ||||||||
Sbjct: 11931971 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagca 11932023
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                     
Query: 361      accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagc 413
                ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11928117 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagc 11928169



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 362      ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
                |||||||||||||||||||| |||||||||||||| |  ||||| ||||||||
Sbjct: 11928734 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagca 11928786
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>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0014I10, complete sequence
          Length = 113946

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                  
Query: 361   accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagc 413
             ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32616 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagc 32668



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 362   ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
             |||||||||||||||||||| |||||||||||||| |  ||||| ||||||||
Sbjct: 33233 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagca 33285
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                      
Query: 361      accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
                ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 28952114 accaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagca 28952061



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                             
Query: 370      ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28956077 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 28956033



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                      
Query: 361      accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
                ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||
Sbjct: 28940904 accaggggaggatcttccagcgctggttgtcgcccttacaccactcccagagca 28940851



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                     
Query: 362      ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
                |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 28951426 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagca 28951374



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                     
Query: 362      ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
                |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 28939901 ccaggggaggatcttccagcactggttgtcgcccttgcaccactcccagagca 28939849
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                   
Query: 361   accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
             ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 69651 accaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagca 69598



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                          
Query: 370   ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
             |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73614 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 73570



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                   
Query: 361   accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
             ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||
Sbjct: 58441 accaggggaggatcttccagcgctggttgtcgcccttacaccactcccagagca 58388



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 362   ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
             |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 68963 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagca 68911



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 362   ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
             |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 57438 ccaggggaggatcttccagcactggttgtcgcccttgcaccactcccagagca 57386
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>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene
          Length = 2101

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                  
Query: 361  accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 2041 accaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagca 1988



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                 
Query: 362  ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 1353 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagca 1301
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>ref|XM_479573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 988

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                        
Query: 370 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 656
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>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence
          Length = 666

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                        
Query: 370 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 381
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>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene
          Length = 1531

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                         
Query: 370  ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 1273
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>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full
           insert sequence
          Length = 987

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                        
Query: 370 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ggatcttccagcgctggttgtcgccctcgcaccacttccagagca 655
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>ref|XM_479570.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1209

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                  
Query: 361  accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||
Sbjct: 1201 accaggggaggatcttccagcgctggttgtcgcccttacaccactcccagagca 1148



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 362 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 512 ccaggggaggatcttccagcactggttgtcgcccttgcaccactcccagagca 460
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>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds
          Length = 846

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                    
Query: 374 cttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cttccagcgctggttgtcgccctcgcaccacttccagagca 552
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>ref|NM_183466.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1093

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 372 atcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagca 755
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                         
Query: 372    atcttccagcgctggttgtcgccctcgcaccacttccagagca 414
              |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 227774 atcttccagcgctggttgtcaccctcgcaccactcccagagca 227732
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>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436E04
          Length = 144644

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                        
Query: 372   atcttccagcgctggttgtcgccctcgcaccacttccagagca 414
             |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 69444 atcttccagcgctggttgtcaccctcgcaccactcccagagca 69402
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>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full
           insert sequence
          Length = 1093

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 372 atcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagca 755
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>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full
           insert sequence
          Length = 1088

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 372 atcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 794 atcttccagcgctggttgtcaccctcgcaccactcccagagca 752
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>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full
            insert sequence
          Length = 1392

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 372  atcttccagcgctggttgtcgccctcgcaccacttccagagca 414
            |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1080 atcttccagcgctggttgtcaccctcgcaccactcccagagca 1038
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>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full
           insert sequence
          Length = 1220

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 372 atcttccagcgctggttgtcgccctcgcaccacttccagagca 414
           |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 837 atcttccagcgctggttgtcaccctcgcaccactcccagagca 795
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>gb|DQ083207.1| Oryza sativa (indica cultivar-group) clone 6S8A23 mRNA sequence
          Length = 332

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 355 gcatctaccaggggaggatcttccagcgctggttgtcgcc 394
           |||| |||||||||| ||||||||||||||||||||||||
Sbjct: 40  gcatttaccaggggacgatcttccagcgctggttgtcgcc 1
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>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence
          Length = 778

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 362 ccaggggaggatcttccagcgctggttgtcgccct 396
           |||||| ||||||||||||| ||||||||||||||
Sbjct: 691 ccagggcaggatcttccagctctggttgtcgccct 657
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>ref|NM_129462.2| Arabidopsis thaliana unknown protein AT2G39050 mRNA, complete cds
          Length = 1271

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 371 gatcttccagcgctggttgtcgcc 394
           |||||||||| |||||||||||||
Sbjct: 966 gatcttccagagctggttgtcgcc 943
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>gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, complete sequence
          Length = 261249

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   tcctggtacagcatctacca 364
             ||||||||||||||||||||
Sbjct: 62875 tcctggtacagcatctacca 62894
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>emb|AL136992.22| Human DNA sequence from clone RP11-400P21 on chromosome 20 Contains the
              SCYE1P gene for small inducible cytokine subfamily E member
              1 (endothelial-monocyte activating) pseudogene, complete
              sequence
          Length = 163681

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     tccctccccactctctccaa 113
              ||||||||||||||||||||
Sbjct: 113352 tccctccccactctctccaa 113333
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>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7
          Length = 349746

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   gatggcaatgcagcagatct 345
             ||||||||||||||||||||
Sbjct: 78899 gatggcaatgcagcagatct 78918
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>gb|AY118445.1| Drosophila melanogaster SD10002 full insert cDNA
          Length = 1950

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  gctagcagcagcaggaggac 240
            ||||||||||||||||||||
Sbjct: 1423 gctagcagcagcaggaggac 1404
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>ref|NM_170106.2| Drosophila melanogaster CG5902-RB, transcript variant B (CG5902),
            mRNA
          Length = 1736

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  gctagcagcagcaggaggac 240
            ||||||||||||||||||||
Sbjct: 1228 gctagcagcagcaggaggac 1209
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>gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, complete sequence
          Length = 189144

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ctccccactctctccaacac 116
             ||||||||||||||||||||
Sbjct: 54241 ctccccactctctccaacac 54260
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 108     ctccaacaccctcttcttcc 127
               ||||||||||||||||||||
Sbjct: 3314594 ctccaacaccctcttcttcc 3314575
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>ref|NM_142944.2| Drosophila melanogaster CG5902-RA, transcript variant A (CG5902),
            mRNA
          Length = 1934

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  gctagcagcagcaggaggac 240
            ||||||||||||||||||||
Sbjct: 1426 gctagcagcagcaggaggac 1407
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>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete
             sequence
          Length = 96827

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   gatcttccagcgctggttgtcgcc 394
             |||||||||| |||||||||||||
Sbjct: 77194 gatcttccagagctggttgtcgcc 77171
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>gb|AY093795.1| Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds
          Length = 954

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 371 gatcttccagcgctggttgtcgcc 394
           |||||||||| |||||||||||||
Sbjct: 942 gatcttccagagctggttgtcgcc 919
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>gb|AF411801.1|AF411801 Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds
          Length = 1209

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 371 gatcttccagcgctggttgtcgcc 394
           |||||||||| |||||||||||||
Sbjct: 966 gatcttccagagctggttgtcgcc 943
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>gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosome 12, complete
             sequence
          Length = 131417

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    tcacagagtagcacagtaca 33
             ||||||||||||||||||||
Sbjct: 69065 tcacagagtagcacagtaca 69084
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>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone
              BACR05C11, complete sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    gctagcagcagcaggaggac 240
              ||||||||||||||||||||
Sbjct: 153673 gctagcagcagcaggaggac 153654
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>emb|BX819436.1|CNS0A8S2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1226

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 371 gatcttccagcgctggttgtcgcc 394
           |||||||||| |||||||||||||
Sbjct: 952 gatcttccagagctggttgtcgcc 929
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>gb|AC008202.4|AC008202 Drosophila melanogaster, chromosome 3R, region 95C-95D, BAC clone
             BACR15J11, complete sequence
          Length = 186159

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gctagcagcagcaggaggac 240
             ||||||||||||||||||||
Sbjct: 56677 gctagcagcagcaggaggac 56658
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>gb|AY087909.1| Arabidopsis thaliana clone 39558 mRNA, complete sequence
          Length = 1186

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 371 gatcttccagcgctggttgtcgcc 394
           |||||||||| |||||||||||||
Sbjct: 966 gatcttccagagctggttgtcgcc 943
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>gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, complete sequence
          Length = 228353

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    tcctggtacagcatctacca 364
              ||||||||||||||||||||
Sbjct: 102587 tcctggtacagcatctacca 102568
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>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete
              sequence
          Length = 230236

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    gctagcagcagcaggaggac 240
              ||||||||||||||||||||
Sbjct: 186565 gctagcagcagcaggaggac 186546
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>gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complete sequence
          Length = 198160

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    caacaccctcttcttcctcg 130
              ||||||||||||||||||||
Sbjct: 133740 caacaccctcttcttcctcg 133721
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>emb|AL627073.15| Mouse DNA sequence from clone RP23-234E14 on chromosome 4, complete
             sequence
          Length = 137991

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   ctcctggtacagcatctacc 363
             ||||||||||||||||||||
Sbjct: 85405 ctcctggtacagcatctacc 85386


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,229,341
Number of Sequences: 3902068
Number of extensions: 3229341
Number of successful extensions: 68666
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68446
Number of HSP's gapped (non-prelim): 220
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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