ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast13b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110193.1| Zea mays CL38374_1 mRNA sequence 161 2e-36
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 4e-25
3dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 123 4e-25
4gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome... 113 4e-22
5ref|XM_475307.1| Oryza sativa (japonica cultivar-group), predic... 113 4e-22
6gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome... 113 4e-22
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 113 4e-22
8dbj|AK102974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
9dbj|AK108852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
10ref|NM_190764.1| Oryza sativa (japonica cultivar-group), predic... 94 4e-16
11ref|NM_119172.2| Arabidopsis thaliana unknown protein AT4G30260 ... 52 0.001
12emb|AL109796.1|ATF9N11 Arabidopsis thaliana DNA chromosome 4, BA... 52 0.001
13emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, ... 52 0.001
14gb|AY093179.1| Arabidopsis thaliana putative protein (not annota... 52 0.001
15gb|AY056083.1| Arabidopsis thaliana AT4g30260/F9N11_110 mRNA, co... 52 0.001
16gb|AY045675.1| Arabidopsis thaliana AT4g30260/F9N11_110 mRNA, co... 52 0.001
17emb|BX826623.1|CNS0A445 Arabidopsis thaliana Full-length cDNA Co... 52 0.001
18gb|AC008434.5| Homo sapiens chromosome 5 clone CTC-325J23, compl... 42 1.3
19gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map ... 42 1.3
20gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma... 42 1.3
21gb|BT024504.1| Arabidopsis thaliana At2g18840 mRNA, complete cds 42 1.3
22emb|BX821663.1|CNS0AA5E Arabidopsis thaliana Full-length cDNA Co... 42 1.3
23gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 5.1
24ref|XM_380384.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 5.1
25emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete ch... 40 5.1
26gb|AF317474.1| Sinorhizobium meliloti adenylate kinase (adk), ri... 40 5.1
27gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cance... 40 5.1
28gb|AY181248.1| Kluyveromyces delphensis putative mating-type loc... 40 5.1
29gb|AE009519.1| Brucella melitensis 16M chromosome I, section 76 ... 40 5.1
30gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 5.1
31emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 5.1 
>gb|AY110193.1| Zea mays CL38374_1 mRNA sequence
          Length = 748

 Score =  161 bits (81), Expect = 2e-36
 Identities = 114/125 (91%)
 Strand = Plus / Plus

                                                                       
Query: 257 taatctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatg 316
           ||||| ||||||||||||||||| || || ||||| ||||||||||| |||||||||| |
Sbjct: 182 taatcaatggcaattatgaggaaaccaactgagatatacatgaggaagacaggatatagg 241

                                                                       
Query: 317 gccagagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggag 376
           |||||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 242 gccagagcttttctccttgggttaacagcagcgctcatgaatggatacgcagcccaggag 301

                
Query: 377 ctcca 381
           |||||
Sbjct: 302 ctcca 306
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 4e-25
 Identities = 107/122 (87%)
 Strand = Plus / Minus

                                                                            
Query: 260      tctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatggcc 319
                |||||||||||||||||||| || || || || ||||||||||| || ||||| | ||||
Sbjct: 37572262 tctatggcaattatgaggaaaccaactgaaatatacatgaggaagacgggatacagggcc 37572203

                                                                            
Query: 320      agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
                |||||||||||||||||||| || ||||| ||||||||||| || ||||||||||| |||
Sbjct: 37572202 agagcctttctccttgggttaactgcagcactcatgaatggatatgcagcccaggaactc 37572143

                  
Query: 380      ca 381
                ||
Sbjct: 37572142 ca 37572141



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 24       agtcaattacgtggtccaaagcacgagatgccctttacaaca 65
                ||||||||  ||||||||||| |||||| |||||||||||||
Sbjct: 37572487 agtcaattgagtggtccaaagtacgagaagccctttacaaca 37572446
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0677H08
          Length = 178830

 Score =  123 bits (62), Expect = 4e-25
 Identities = 107/122 (87%)
 Strand = Plus / Minus

                                                                         
Query: 260   tctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatggcc 319
             |||||||||||||||||||| || || || || ||||||||||| || ||||| | ||||
Sbjct: 32736 tctatggcaattatgaggaaaccaactgaaatatacatgaggaagacgggatacagggcc 32677

                                                                         
Query: 320   agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
             |||||||||||||||||||| || ||||| ||||||||||| || ||||||||||| |||
Sbjct: 32676 agagcctttctccttgggttaactgcagcactcatgaatggatatgcagcccaggaactc 32617

               
Query: 380   ca 381
             ||
Sbjct: 32616 ca 32615



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 24    agtcaattacgtggtccaaagcacgagatgccctttacaaca 65
             ||||||||  ||||||||||| |||||| |||||||||||||
Sbjct: 32961 agtcaattgagtggtccaaagtacgagaagccctttacaaca 32920
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>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05,
             complete sequence
          Length = 109126

 Score =  113 bits (57), Expect = 4e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                         
Query: 257   taatctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatg 316
             |||||||| || || ||||||||||| || |||| |||||| ||||| ||||||||||  
Sbjct: 70287 taatctattgcgatgatgaggaacccaacagagacgtacataaggaagacaggatatagt 70346

                                                                         
Query: 317   gccagagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggag 376
             ||||  ||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 70347 gccaacgcctttctccttgggttaacagcagcactcatgaatggatatgctgcccaggag 70406

                  
Query: 377   ctcca 381
             |||||
Sbjct: 70407 ctcca 70411
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>ref|XM_475307.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 840

 Score =  113 bits (57), Expect = 4e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                       
Query: 257 taatctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatg 316
           |||||||| || || ||||||||||| || |||| |||||| ||||| ||||||||||  
Sbjct: 839 taatctattgcgatgatgaggaacccaacagagacgtacataaggaagacaggatatagt 780

                                                                       
Query: 317 gccagagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggag 376
           ||||  ||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 779 gccaacgcctttctccttgggttaacagcagcactcatgaatggatatgctgcccaggag 720

                
Query: 377 ctcca 381
           |||||
Sbjct: 719 ctcca 715
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>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0042J17, complete sequence
          Length = 124139

 Score =  113 bits (57), Expect = 4e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                        
Query: 257  taatctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatg 316
            |||||||| || || ||||||||||| || |||| |||||| ||||| ||||||||||  
Sbjct: 1003 taatctattgcgatgatgaggaacccaacagagacgtacataaggaagacaggatatagt 1062

                                                                        
Query: 317  gccagagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggag 376
            ||||  ||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 1063 gccaacgcctttctccttgggttaacagcagcactcatgaatggatatgctgcccaggag 1122

                 
Query: 377  ctcca 381
            |||||
Sbjct: 1123 ctcca 1127
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  113 bits (57), Expect = 4e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                            
Query: 257      taatctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatg 316
                |||||||| || || ||||||||||| || |||| |||||| ||||| ||||||||||  
Sbjct: 21283681 taatctattgcgatgatgaggaacccaacagagacgtacataaggaagacaggatatagt 21283740

                                                                            
Query: 317      gccagagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggag 376
                ||||  ||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 21283741 gccaacgcctttctccttgggttaacagcagcactcatgaatggatatgctgcccaggag 21283800

                     
Query: 377      ctcca 381
                |||||
Sbjct: 21283801 ctcca 21283805
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>dbj|AK102974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115K22, full
           insert sequence
          Length = 1088

 Score =  113 bits (57), Expect = 4e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                       
Query: 257 taatctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatg 316
           |||||||| || || ||||||||||| || |||| |||||| ||||| ||||||||||  
Sbjct: 934 taatctattgcgatgatgaggaacccaacagagacgtacataaggaagacaggatatagt 875

                                                                       
Query: 317 gccagagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggag 376
           ||||  ||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 874 gccaacgcctttctccttgggttaacagcagcactcatgaatggatatgctgcccaggag 815

                
Query: 377 ctcca 381
           |||||
Sbjct: 814 ctcca 810
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>dbj|AK108852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A09, full
           insert sequence
          Length = 1062

 Score =  107 bits (54), Expect = 3e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 260 tctatggcaattatgaggaacccgaccgagatgtacatgaggaatacaggatatatggcc 319
           |||||||||||||||||||| || || || || ||||||||||| || ||||| | ||||
Sbjct: 958 tctatggcaattatgaggaaaccaactgaaatatacatgaggaagacgggatacagggcc 899

                                                                       
Query: 320 agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
            ||||||||| ||||||||| || ||||| ||||||||||| || ||||||||||| |||
Sbjct: 898 tgagcctttccccttgggttaactgcagcactcatgaatggatatgcagcccaggaactc 839

             
Query: 380 ca 381
           ||
Sbjct: 838 ca 837
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>ref|NM_190764.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1995

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                       
Query: 295 catgaggaatacaggatatatggccagagcctttctccttgggttcacagcagcgctcat 354
           ||||||||| || ||||| | |||||||||||||||||||||||| || ||||| |||||
Sbjct: 780 catgaggaagacgggatacagggccagagcctttctccttgggttaactgcagcactcat 721

                                      
Query: 355 gaatgggtaggcagcccaggagctcca 381
           |||||| || ||||||||||| |||||
Sbjct: 720 gaatggatatgcagcccaggaactcca 694
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>ref|NM_119172.2| Arabidopsis thaliana unknown protein AT4G30260 mRNA, complete cds
          Length = 1215

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 320 agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
           ||||| ||||| || |||||||| || ||||||||||| || || |||||||| ||||||
Sbjct: 883 agagcttttcttctcgggttcactgcggcgctcatgaaaggataagcagcccaagagctc 824

             
Query: 380 ca 381
           ||
Sbjct: 823 ca 822
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>emb|AL109796.1|ATF9N11 Arabidopsis thaliana DNA chromosome 4, BAC clone F9N11
          Length = 87635

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 320   agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
             ||||| ||||| || |||||||| || ||||||||||| || || |||||||| ||||||
Sbjct: 83584 agagcttttcttctcgggttcactgcggcgctcatgaaaggataagcagcccaagagctc 83643

               
Query: 380   ca 381
             ||
Sbjct: 83644 ca 83645
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>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72
          Length = 198924

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                          
Query: 320    agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
              ||||| ||||| || |||||||| || ||||||||||| || || |||||||| ||||||
Sbjct: 156605 agagcttttcttctcgggttcactgcggcgctcatgaaaggataagcagcccaagagctc 156664

                
Query: 380    ca 381
              ||
Sbjct: 156665 ca 156666
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>gb|AY093179.1| Arabidopsis thaliana putative protein (not annotated) mRNA,
           complete cds
          Length = 1204

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 320 agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
           ||||| ||||| || |||||||| || ||||||||||| || || |||||||| ||||||
Sbjct: 881 agagcttttcttctcgggttcactgcggcgctcatgaaaggataagcagcccaagagctc 822

             
Query: 380 ca 381
           ||
Sbjct: 821 ca 820
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>gb|AY056083.1| Arabidopsis thaliana AT4g30260/F9N11_110 mRNA, complete cds
          Length = 843

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 320 agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
           ||||| ||||| || |||||||| || ||||||||||| || || |||||||| ||||||
Sbjct: 779 agagcttttcttctcgggttcactgcggcgctcatgaaaggataagcagcccaagagctc 720

             
Query: 380 ca 381
           ||
Sbjct: 719 ca 718
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>gb|AY045675.1| Arabidopsis thaliana AT4g30260/F9N11_110 mRNA, complete cds
          Length = 1193

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 320 agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
           ||||| ||||| || |||||||| || ||||||||||| || || |||||||| ||||||
Sbjct: 871 agagcttttcttctcgggttcactgcggcgctcatgaaaggataagcagcccaagagctc 812

             
Query: 380 ca 381
           ||
Sbjct: 811 ca 810
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>emb|BX826623.1|CNS0A445 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZA04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1113

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 320 agagcctttctccttgggttcacagcagcgctcatgaatgggtaggcagcccaggagctc 379
           ||||| ||||| || |||||||| || ||||||||||| || || |||||||| ||||||
Sbjct: 838 agagcttttcttctcgggttcactgcggcgctcatgaaaggataagcagcccaagagctc 779

             
Query: 380 ca 381
           ||
Sbjct: 778 ca 777
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>gb|AC008434.5| Homo sapiens chromosome 5 clone CTC-325J23, complete sequence
          Length = 103701

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   tccagggacaaagtatattca 178
             |||||||||||||||||||||
Sbjct: 29025 tccagggacaaagtatattca 29005
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>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete
             sequence
          Length = 88413

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                         
Query: 293   tacatgaggaatacaggatatatggccagagcctttctccttgggttcacagcagcgctc 352
             ||||||||||| || || ||||  || || || ||||| |||||||| || || | ||||
Sbjct: 79684 tacatgaggaagacggggtatagagcgagtgcttttcttcttgggttaaccgctgagctc 79625

                                          
Query: 353   atgaatgggtaggcagcccaggagctcca 381
             || || ||||| |||||||| ||||||||
Sbjct: 79624 ataaaagggtaagcagcccatgagctcca 79596
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>gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 map CIC06E08, complete
             sequence
          Length = 99359

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                         
Query: 293   tacatgaggaatacaggatatatggccagagcctttctccttgggttcacagcagcgctc 352
             ||||||||||| || || ||||  || || || ||||| |||||||| || || | ||||
Sbjct: 11541 tacatgaggaagacggggtatagagcgagtgcttttcttcttgggttaaccgctgagctc 11482

                                          
Query: 353   atgaatgggtaggcagcccaggagctcca 381
             || || ||||| |||||||| ||||||||
Sbjct: 11481 ataaaagggtaagcagcccatgagctcca 11453
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>gb|BT024504.1| Arabidopsis thaliana At2g18840 mRNA, complete cds
          Length = 846

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                       
Query: 293 tacatgaggaatacaggatatatggccagagcctttctccttgggttcacagcagcgctc 352
           ||||||||||| || || ||||  || || || ||||| |||||||| || || | ||||
Sbjct: 809 tacatgaggaagacggggtatagagcgagtgcttttcttcttgggttaaccgctgagctc 750

                                        
Query: 353 atgaatgggtaggcagcccaggagctcca 381
           || || ||||| |||||||| ||||||||
Sbjct: 749 ataaaagggtaagcagcccatgagctcca 721
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>emb|BX821663.1|CNS0AA5E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL62ZD03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 731

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                       
Query: 293 tacatgaggaatacaggatatatggccagagcctttctccttgggttcacagcagcgctc 352
           ||||||||||| || || ||||  || || || ||||| |||||||| || || | ||||
Sbjct: 524 tacatgaggaagacggggtatagagcgagtgcttttcttcttgggttaaccgctgagctc 465

                                        
Query: 353 atgaatgggtaggcagcccaggagctcca 381
           || || ||||| |||||||| ||||||||
Sbjct: 464 ataaaagggtaagcagcccatgagctcca 436
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     gtgaaggccaggttctcgac 139
               ||||||||||||||||||||
Sbjct: 1187239 gtgaaggccaggttctcgac 1187220
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>ref|XM_380384.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00208.1)
           partial mRNA
          Length = 3168

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 aaggccaggttctcgacaaa 142
           ||||||||||||||||||||
Sbjct: 86  aaggccaggttctcgacaaa 67
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>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12
          Length = 329100

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   gtgaaggccaggttctcgac 139
             ||||||||||||||||||||
Sbjct: 40035 gtgaaggccaggttctcgac 40054
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>gb|AF317474.1| Sinorhizobium meliloti adenylate kinase (adk), ribosomal protein S13
            (rpsM), ribosomal protein S11 (rpsK), RNA polymerase
            alpha-subunit (rpoA), and ribosomal protein L17 (rplQ)
            genes, complete cds
          Length = 4327

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  gtgaaggccaggttctcgac 139
            ||||||||||||||||||||
Sbjct: 2739 gtgaaggccaggttctcgac 2758
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>gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 188196

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   aaaatttcaacatttcaggtgtta 233
             ||||||||| ||||||||||||||
Sbjct: 96765 aaaatttcagcatttcaggtgtta 96788
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>gb|AY181248.1| Kluyveromyces delphensis putative mating-type locus, partial sequence
          Length = 24379

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  tttcaacatttcaggtgtta 233
            ||||||||||||||||||||
Sbjct: 4497 tttcaacatttcaggtgtta 4516
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>gb|AE009519.1| Brucella melitensis 16M chromosome I, section 76 of 195 of the
            complete sequence
          Length = 10564

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  gtgaaggccaggttctcgac 139
            ||||||||||||||||||||
Sbjct: 4736 gtgaaggccaggttctcgac 4755
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     gtgaaggccaggttctcgac 139
               ||||||||||||||||||||
Sbjct: 1205347 gtgaaggccaggttctcgac 1205328
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     gtgaaggccaggttctcgac 139
               ||||||||||||||||||||
Sbjct: 1202498 gtgaaggccaggttctcgac 1202479


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,930,873
Number of Sequences: 3902068
Number of extensions: 2930873
Number of successful extensions: 50624
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50542
Number of HSP's gapped (non-prelim): 82
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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