| Clone Name | rbast13b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold Length = 305394 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 tgattagctattaagaaagggt 156 |||||||||||||||||||||| Sbjct: 39843 tgattagctattaagaaagggt 39864
>gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence Length = 59818 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 tgattagctattaagaaagggt 156 |||||||||||||||||||||| Sbjct: 39843 tgattagctattaagaaagggt 39864
>emb|BX927184.5| Zebrafish DNA sequence from clone DKEY-125I20 in linkage group 5, complete sequence Length = 160345 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ttcagagtatttgaagaataa 355 ||||||||||||||||||||| Sbjct: 54294 ttcagagtatttgaagaataa 54314
>gb|AC108099.2| Homo sapiens chromosome 5 clone RP11-112L7, complete sequence Length = 172945 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tgcatttgtgtgaagaccatt 245 ||||||||||||||||||||| Sbjct: 64419 tgcatttgtgtgaagaccatt 64399
>gb|AC137551.1| Homo sapiens chromosome 5 clone RP11-867C24, complete sequence Length = 183535 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tgcatttgtgtgaagaccatt 245 ||||||||||||||||||||| Sbjct: 158200 tgcatttgtgtgaagaccatt 158180
>emb|BX005029.13| Zebrafish DNA sequence from clone CH211-182D3 in linkage group 5, complete sequence Length = 128948 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ttcagagtatttgaagaataa 355 ||||||||||||||||||||| Sbjct: 102751 ttcagagtatttgaagaataa 102731
>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence Length = 203581 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 caaataaagtaagaagtacaaatc 105 |||||||||| ||||||||||||| Sbjct: 165694 caaataaagtgagaagtacaaatc 165671 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 caaataaagtaagaagtacaaatc 105 |||||||||| ||||||||||||| Sbjct: 145500 caaataaagtgagaagtacaaatc 145477
>emb|AL773522.15| Mouse DNA sequence from clone RP23-148P20 on chromosome 4, complete sequence Length = 185592 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gagcaaacatctttcaaaca 77 |||||||||||||||||||| Sbjct: 36956 gagcaaacatctttcaaaca 36975
>gb|AF395821.1| Oryctolagus cuniculus factor XI mRNA, complete cds Length = 2331 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 aagtgaagagcaaacatctt 70 |||||||||||||||||||| Sbjct: 277 aagtgaagagcaaacatctt 258 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,062,217 Number of Sequences: 3902068 Number of extensions: 3062217 Number of successful extensions: 59518 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59503 Number of HSP's gapped (non-prelim): 15 length of query: 355 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 333 effective length of database: 17,147,199,772 effective search space: 5710017524076 effective search space used: 5710017524076 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)