>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 290      tcacctcctctagacgctgcctcacctcgaccgcgcgcagcacgccgtcgccgcc 344
                |||||||||| |  ||| |||||| |||  |||||||||||||||||||||||||
Sbjct: 22950079 tcacctcctcgacccgccgcctcagctccgccgcgcgcagcacgccgtcgccgcc 22950133



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                            
Query: 166      ccctccacgaatgcccttagattacgatccgacgagccgtcttttcccagagcctcagcg 225
                ||||||||||| ||| | ||||||||||||||||| ||  |||| || |||||||| || 
Sbjct: 22949961 ccctccacgaaggccgtcagattacgatccgacgaccctcctttccctagagcctccgcc 22950020

                              
Query: 226      accacccgcttcca 239
                ||| | ||||||||
Sbjct: 22950021 accgctcgcttcca 22950034

>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502H06
          Length = 165630

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                     
Query: 290    tcacctcctctagacgctgcctcacctcgaccgcgcgcagcacgccgtcgccgcc 344
              |||||||||| |  ||| |||||| |||  |||||||||||||||||||||||||
Sbjct: 124901 tcacctcctcgacccgccgcctcagctccgccgcgcgcagcacgccgtcgccgcc 124955



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                          
Query: 166    ccctccacgaatgcccttagattacgatccgacgagccgtcttttcccagagcctcagcg 225
              ||||||||||| ||| | ||||||||||||||||| ||  |||| || |||||||| || 
Sbjct: 124783 ccctccacgaaggccgtcagattacgatccgacgaccctcctttccctagagcctccgcc 124842

                            
Query: 226    accacccgcttcca 239
              ||| | ||||||||
Sbjct: 124843 accgctcgcttcca 124856

>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 290   tcacctcctctagacgctgcctcacctcgaccgcgcgcagcacgccgtcgccgcc 344
             |||||||||| |  ||| |||||| |||  |||||||||||||||||||||||||
Sbjct: 16564 tcacctcctcgacccgccgcctcagctccgccgcgcgcagcacgccgtcgccgcc 16618



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                         
Query: 166   ccctccacgaatgcccttagattacgatccgacgagccgtcttttcccagagcctcagcg 225
             ||||||||||| ||| | ||||||||||||||||| ||  |||| || |||||||| || 
Sbjct: 16446 ccctccacgaaggccgtcagattacgatccgacgaccctcctttccctagagcctccgcc 16505

                           
Query: 226   accacccgcttcca 239
             ||| | ||||||||
Sbjct: 16506 accgctcgcttcca 16519

>dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G10, full
            insert sequence
          Length = 1663

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 166  ccctccacgaatgcccttagattacgatccgacgagccgtcttttcccagagcctcagcg 225
            ||||||||||| ||| | ||||||||||||||||| ||  |||| || |||||||| || 
Sbjct: 1477 ccctccacgaaggccgtcagattacgatccgacgaccctcctttccctagagcctccgcc 1418

                          
Query: 226  accacccgcttcca 239
            ||| | ||||||||
Sbjct: 1417 accgctcgcttcca 1404



 Score = 46.1 bits (23), Expect = 0.080
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 290  tcacctcctctagacgctgcctcacctcgaccgcgcgcagcacgccgtcgccgcc 344
            |||||||||| |  ||| |||||| |||  ||||||||||||||||| |||||||
Sbjct: 1359 tcacctcctcgacccgccgcctcagctccgccgcgcgcagcacgccgccgccgcc 1305

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 321    cgcgcgcagcacgccgtcgccgcc 344
              ||||||||||||||||||||||||
Sbjct: 352036 cgcgcgcagcacgccgtcgccgcc 352059

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 317    cgaccgcgcgcagcacgccgtc 338
              ||||||||||||||||||||||
Sbjct: 341048 cgaccgcgcgcagcacgccgtc 341069



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 321     cgcgcgcagcacgccgtcgc 340
               ||||||||||||||||||||
Sbjct: 1438393 cgcgcgcagcacgccgtcgc 1438374

>gb|AC124416.4| Mus musculus BAC clone RP24-308I2 from chromosome 9, complete sequence
          Length = 184879

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 142    cataaggagacactgctaatga 163
              ||||||||||||||||||||||
Sbjct: 157727 cataaggagacactgctaatga 157748

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 317     cgaccgcgcgcagcacgccgtc 338
               ||||||||||||||||||||||
Sbjct: 1660119 cgaccgcgcgcagcacgccgtc 1660140



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 321     cgcgcgcagcacgccgtcgc 340
               ||||||||||||||||||||
Sbjct: 2749313 cgcgcgcagcacgccgtcgc 2749294

>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete
            sequence
          Length = 204400

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 142  cataaggagacactgctaatga 163
            ||||||||||||||||||||||
Sbjct: 4999 cataaggagacactgctaatga 5020

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 317     cgaccgcgcgcagcacgccgtc 338
               ||||||||||||||||||||||
Sbjct: 1110567 cgaccgcgcgcagcacgccgtc 1110588

>dbj|AB195016.1| Uncultured bacterium gene for catechol 2,3-dioxygenase, partial
           cds, clone: R1-375-4c
          Length = 375

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 tcgaccgcgcgcagcacgccgt 337
           ||||||||||||||||||||||
Sbjct: 258 tcgaccgcgcgcagcacgccgt 237

>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster,
             complete sequence
          Length = 99892

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 314   cctcgaccgcgcgcagcacgccgtc 338
             |||||||||||||||||||| ||||
Sbjct: 21288 cctcgaccgcgcgcagcacggcgtc 21264

>ref|XM_505557.1| Yarrowia lipolytica CLIB122, YALI0F17908g predicted mRNA
          Length = 1446

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 17  agctgatgataccactgtgct 37
           |||||||||||||||||||||
Sbjct: 951 agctgatgataccactgtgct 971

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 17      agctgatgataccactgtgct 37
               |||||||||||||||||||||
Sbjct: 2389771 agctgatgataccactgtgct 2389791

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     cgaccgcgcgcagcacgccg 336
               ||||||||||||||||||||
Sbjct: 3727320 cgaccgcgcgcagcacgccg 3727339

>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 319    accgcgcgcagcacgccgtcgccg 342
              ||||||||||||||| ||||||||
Sbjct: 131947 accgcgcgcagcacggcgtcgccg 131924

>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 319   accgcgcgcagcacgccgtcgccg 342
             ||||||||||||||| ||||||||
Sbjct: 68439 accgcgcgcagcacggcgtcgccg 68416

>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 316    tcgaccgcgcgcagcacgccgtcg 339
              |||||||||||||||| |||||||
Sbjct: 215659 tcgaccgcgcgcagcaggccgtcg 215682

>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 319    accgcgcgcagcacgccgtcgccg 342
              ||||||||||||||| ||||||||
Sbjct: 134046 accgcgcgcagcacggcgtcgccg 134023

>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    gcaccccccgctccggcctc 278
              ||||||||||||||||||||
Sbjct: 264632 gcaccccccgctccggcctc 264651

>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds,
            strain: N1141
          Length = 66987

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  cagcacgccgtcgccgccca 346
            ||||||||||||||||||||
Sbjct: 7878 cagcacgccgtcgccgccca 7897

>dbj|AB207101.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds,
            strain: K1
          Length = 45779

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  cagcacgccgtcgccgccca 346
            ||||||||||||||||||||
Sbjct: 4825 cagcacgccgtcgccgccca 4844

>gb|BC103337.1| Bos taurus actin related protein 2/3 complex, subunit 5, 16kDa,
           mRNA (cDNA clone MGC:127179 IMAGE:7945585), complete cds
          Length = 2054

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 cctcctctagacgctgcctc 312
           ||||||||||||||||||||
Sbjct: 86  cctcctctagacgctgcctc 67

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     ccgcgcgcagcacgccgtcg 339
               ||||||||||||||||||||
Sbjct: 2063584 ccgcgcgcagcacgccgtcg 2063603



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 317     cgaccgcgcgcagcacgccg 336
               ||||||||||||||||||||
Sbjct: 1482555 cgaccgcgcgcagcacgccg 1482536

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 320      ccgcgcgcagcacgccgtcgccgc 343
                ||||||||||||||||| ||||||
Sbjct: 20017589 ccgcgcgcagcacgccgccgccgc 20017612

>gb|AE004577.1| Pseudomonas aeruginosa PAO1, section 138 of 529 of the complete
            genome
          Length = 13737

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cagcacgccgtcgccgccca 346
            ||||||||||||||||||||
Sbjct: 1364 cagcacgccgtcgccgccca 1345

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 311     tcacctcgaccgcgcgcagcacgccgtc 338
               |||||||||||||||||  |||||||||
Sbjct: 1137574 tcacctcgaccgcgcgcgccacgccgtc 1137547

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     cgcagcacgccgtcgccgcc 344
               ||||||||||||||||||||
Sbjct: 3616056 cgcagcacgccgtcgccgcc 3616037

>gb|AE004970.1| Halobacterium sp. NRC-1 section 1 of 170 of the complete genome
          Length = 12825

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 317  cgaccgcgcgcagcacgccg 336
            ||||||||||||||||||||
Sbjct: 2982 cgaccgcgcgcagcacgccg 2963

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     gcgcgcagcacgccgtcgcc 341
               ||||||||||||||||||||
Sbjct: 2772805 gcgcgcagcacgccgtcgcc 2772786

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 320      ccgcgcgcagcacgccgtcgccgc 343
                ||||||||||||||||| ||||||
Sbjct: 19943803 ccgcgcgcagcacgccgccgccgc 19943826

>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 320  ccgcgcgcagcacgccgtcgccgc 343
            ||||||||||||||||| ||||||
Sbjct: 9671 ccgcgcgcagcacgccgccgccgc 9648

>ref|NM_001035447.1| Bos taurus actin related protein 2/3 complex, subunit 5, 16kDa
           (ARPC5), mRNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 cctcctctagacgctgcctc 312
           ||||||||||||||||||||
Sbjct: 86  cctcctctagacgctgcctc 67

>gb|M27903.1|HUMPIM1A Human pim-1 proto-oncogene gene, complete cds
          Length = 6113

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  gagcaccccccgctccggcc 276
            ||||||||||||||||||||
Sbjct: 1256 gagcaccccccgctccggcc 1275


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,209,095
Number of Sequences: 3902068
Number of extensions: 2209095
Number of successful extensions: 47801
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46922
Number of HSP's gapped (non-prelim): 879
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)