>CRED_ECOLI (P08369) Inner membrane protein creD|
          Length = 450

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = -1

Query: 369 QGVRRPQGGLPEGQWMVQHHRHPPALHLPGLGHRDVVPVG 250
           QGV  P   LPEG W  Q+ +   AL+L G G   VVP G
Sbjct: 179 QGVHIP---LPEGDWRKQNLKLNMALNLSGTGDLSVVPGG 215

>SA190_YEAST (P36123) SIT4-associating protein SAP190|
          Length = 1033

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 180 DAKSLYQSSHDER*NSDRGTAGTSLQEPHH 269
           D  SLY   +DE   SD+ T+GTSL  P H
Sbjct: 878 DGNSLYNEDNDEN-GSDKWTSGTSLFPPDH 906

>TREA_XANAC (Q8PPT1) Periplasmic trehalase precursor (EC 3.2.1.28)|
           (Alpha,alpha-trehalase) (Alpha,alpha-trehalose
           glucohydrolase)
          Length = 568

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 389 YLLHEHIKASGGLKEAFQKANGWSNTIGILLLFIYP 282
           Y L       GG + A Q   GW+N + ++LL +YP
Sbjct: 513 YGLETDAAGGGGGEYALQDGFGWTNGVTLMLLNLYP 548

>TREA_XANCP (Q8P519) Periplasmic trehalase precursor (EC 3.2.1.28)|
           (Alpha,alpha-trehalase) (Alpha,alpha-trehalose
           glucohydrolase)
          Length = 568

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 389 YLLHEHIKASGGLKEAFQKANGWSNTIGILLLFIYP 282
           Y L       GG + A Q   GW+N + ++LL +YP
Sbjct: 513 YGLDADAAGGGGGEYALQDGFGWTNGVTLMLLNLYP 548

>UXAC_CORGL (Q8NMT1) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)|
           (Uronic isomerase)
          Length = 518

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 117 METSPRQFIKHSTGTSSHGFIDAKSLYQSSHDER*NSDRGTAGT-SLQEPH 266
           M    + FI H   ++ HG  D  +   S  D +   D+G AGT +L E H
Sbjct: 235 MRNRRQYFINHGATSADHGLHDTDTTPLSHKDAQKILDKGLAGTATLAEMH 285

>FBX41_MOUSE (Q6NS60) F-box only protein 41|
          Length = 872

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 369 QGVRRPQGGLPEGQWMV-QHHRHPPALHLPGLGHRDVVPVGL 247
           QG  +  G  P G  ++  HH H P  H P     D+VP  L
Sbjct: 89  QGKEQATGPSPAGPHLLHHHHHHAPLAHFPA----DLVPASL 126

>FBX41_HUMAN (Q8TF61) F-box only protein 41|
          Length = 874

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 369 QGVRRPQGGLPEGQWMVQHHRH-PPALHLPGLGHRDVVPVGL 247
           QG  +  G  P    ++ HH H  P  H PG    D+VP  L
Sbjct: 89  QGKEQAAGPSPAAPHLLHHHHHHAPLAHFPG----DLVPASL 126

>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
 Frame = +3

Query: 30   QSTQRSTEQTFLLMLCTHRSRKQIKQWHQMETSPRQFIKHSTGTSSHGFIDAK---SLYQ 200
            QST+ ST  T  L   T  +   +K  + +     Q I   T    H   + K   SL+ 
Sbjct: 1240 QSTRHSTVATECLSKNTEENLLSLK--NSLNDCSNQVILAKTSQEHHLSEETKCSASLFS 1297

Query: 201  SSHDER*NSDRGTAGTSLQEPHHDGPDRVDEEQEDADGVGPS 326
            S   E    +  TA T+ Q+P   G  +    Q ++ GVG S
Sbjct: 1298 SQCSEL---EDLTANTNTQDPFLIGSSKQMRHQSESQGVGLS 1336

>FGF22_HUMAN (Q9HCT0) Fibroblast growth factor 22 precursor (FGF-22)|
          Length = 170

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 73  YVRTDQGNKLSSGTKWKHRRDSSSNIQQV 159
           ++R D G ++  GT+W+H +DS   I+ V
Sbjct: 52  FLRVDPGGRVQ-GTRWRHGQDSILEIRSV 79

>TPR_HUMAN (P12270) Nucleoprotein TPR|
          Length = 2349

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 23/97 (23%), Positives = 41/97 (42%)
 Frame = +3

Query: 18   SSSLQSTQRSTEQTFLLMLCTHRSRKQIKQWHQMETSPRQFIKHSTGTSSHGFIDAKSLY 197
            S S++ST  + + +    + T + + Q   + Q        I+ +    S   ++   + 
Sbjct: 1745 SGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSSNIVE---VV 1801

Query: 198  QSSHDER*NSDRGTAGTSLQEPHHDGPDRVDEEQEDA 308
            QSS  ER ++     GT    P    P R  EE+ED+
Sbjct: 1802 QSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDS 1838

>ANXA8_RABIT (O97529) Annexin A8 (Annexin VIII)|
          Length = 327

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +3

Query: 51  EQTFLLMLCTHRSRKQIKQWHQMETSPRQFIKHSTGTSSHGFIDAKSL 194
           E  F+ +LCT  +R  ++ + + E    + I+ S  + +HG ++   L
Sbjct: 198 EMKFITILCTRSARHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAML 245

>FTSK_SHEON (Q8EER3) DNA translocase ftsK|
          Length = 911

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 115 KWKHRRDSSSNIQQVQARMGSSTPNHFINRRTM 213
           K+K RRDS   + + +AR  + TP+  ++ R +
Sbjct: 220 KFKERRDSQHVLDKAKARQPAETPSRVLHTRAI 252

>FGF22_MOUSE (Q9ESS2) Fibroblast growth factor 22 precursor (FGF-22)|
          Length = 162

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 73  YVRTDQGNKLSSGTKWKHRRDSSSNIQQVQ 162
           ++R D G ++  GT+W+H +DS   I+ V+
Sbjct: 43  FLRVDLGGRVQ-GTRWRHGQDSIVEIRSVR 71

>FUSC3_FUSCU (Q8J1X7) Allergen Fus c 3|
          Length = 450

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 84  RSRKQIKQWHQMETSPRQFIKHSTGTSSHGFIDAKSLYQSSHDER 218
           R+R+Q K+  ++  + +     STG ++H   DA S   +SH  R
Sbjct: 278 RARRQKKEPRKLSDASQGARSSSTGGTAHSVSDAASPSSTSHQSR 322

>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (Motch B) [Contains: Notch 2 extracellular truncation;
            Notch 2 intracellular domain]
          Length = 2470

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -1

Query: 402  GHRVLPAPRAHQGVRRPQGGLPEGQWM-VQHHRHPPALHLPGLGHRDVVPVGLCLQFLGR 226
            G  + PA  AH G+  PQ   PEG+ M  Q    PP +    +  R +       Q    
Sbjct: 2267 GMVLAPAEGAHPGIAAPQSRPPEGKHMSTQREPLPPIVTFQLIPKRSIAQAAGAPQTQSS 2326

Query: 225  C 223
            C
Sbjct: 2327 C 2327


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,219,512
Number of Sequences: 219361
Number of extensions: 1169721
Number of successful extensions: 3334
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3330
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)