ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast12d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, comple... 40 0.58
2gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, comp... 40 0.58
3gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosom... 38 2.3
4gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete s... 38 2.3
5emb|AL109822.1|SPBC409 S.pombe chromosome II cosmid c409 38 2.3
6gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Ca... 38 2.3
7ref|NM_001021382.1| Schizosaccharomyces pombe 972h- elongation f... 38 2.3
8gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence 38 2.3
9gb|AC096717.3| Homo sapiens BAC clone RP11-10O3 from 4, complete... 38 2.3
10gb|AC098586.3| Homo sapiens BAC clone RP11-109F18 from 4, comple... 38 2.3
11gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Ca... 38 2.3
12emb|AL358913.4|CNS05TEE Human chromosome 14 DNA sequence BAC R-5... 38 2.3
13emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chro... 38 2.3
14emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-7... 38 2.3
15gb|AC127272.4| Mus musculus BAC clone RP24-63G5 from chromosome ... 36 9.1
16emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chro... 36 9.1
17gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome... 36 9.1
18gb|AC122027.1| Mus musculus BAC clone RP24-390L20 from 1, comple... 36 9.1
19ref|XM_652337.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 36 9.1
20gb|AC092033.4| Homo sapiens BAC clone RP11-794I22 from 7, comple... 36 9.1
21gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, com... 36 9.1
22emb|AL589941.6| Human DNA sequence from clone RP13-377P8 on chro... 36 9.1
23emb|AL583882.6| Human DNA sequence from clone RP5-1098C18 on chr... 36 9.1
24emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chro... 36 9.1
25emb|AL354802.15| Human DNA sequence from clone RP11-54O10 on chr... 36 9.1
26gb|AC090154.19| Homo sapiens chromosome 8, clone RP11-705C3, com... 36 9.1
27emb|AL008634.1|HS396D17 Human DNA sequence from clone RP3-396D17... 36 9.1
28emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, stra... 36 9.1
29gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, com... 36 9.1
30dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 36 9.1
31gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complet... 36 9.1
32gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complet... 36 9.1
33gb|AC120377.25| Mus musculus chromosome 3, clone RP24-262L5, com... 36 9.1
34gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, co... 36 9.1
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
36gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, c... 36 9.1
37gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Ca... 36 9.1
38dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
39emb|X06002.1|GGCAII4 G.gallus carbonic anhydrase II gene exon 4 36 9.1
40gb|AC174474.1| Pan troglodytes chromosome X clone CH251-58H10 ma... 36 9.1
41dbj|AP004957.1| Lotus japonicus genomic DNA, chromosome 2, clone... 36 9.1
42emb|AL732410.6| Mouse DNA sequence from clone RP23-91L2 on chrom... 36 9.1
43emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chr... 36 9.1
44emb|AL732319.17| Mouse DNA sequence from clone RP23-180O4 on chr... 36 9.1
45emb|AL136998.36| Mouse DNA sequence from clone RP21-509E24 on ch... 36 9.1
46emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from... 36 9.1 
>gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, complete sequence
          Length = 190123

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     gttttcttattcctaaaaca 59
              ||||||||||||||||||||
Sbjct: 154189 gttttcttattcctaaaaca 154208
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>gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, complete sequence
          Length = 227081

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    gttttcttattcctaaaaca 59
             ||||||||||||||||||||
Sbjct: 29197 gttttcttattcctaaaaca 29216
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>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence
          Length = 197609

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     tgttttcttattcctaaaa 57
              |||||||||||||||||||
Sbjct: 112825 tgttttcttattcctaaaa 112807
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>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence
          Length = 75970

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tagcatgttttcttattcctaaa 56
             |||||||||||| ||||||||||
Sbjct: 14312 tagcatgttttcctattcctaaa 14334
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>emb|AL109822.1|SPBC409 S.pombe chromosome II cosmid c409
          Length = 44865

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    agcatgttttcttattcct 53
             |||||||||||||||||||
Sbjct: 43332 agcatgttttcttattcct 43314
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>gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 152449

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aagagcaagagtggtagca 38
             |||||||||||||||||||
Sbjct: 94340 aagagcaagagtggtagca 94358
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>ref|NM_001021382.1| Schizosaccharomyces pombe 972h- elongation factor G (SPBC409.22c),
            partial mRNA
          Length = 1677

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 35   agcatgttttcttattcct 53
            |||||||||||||||||||
Sbjct: 1534 agcatgttttcttattcct 1552
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>gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence
          Length = 136083

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    tagcatgttttcttattcc 52
             |||||||||||||||||||
Sbjct: 71651 tagcatgttttcttattcc 71669
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>gb|AC096717.3| Homo sapiens BAC clone RP11-10O3 from 4, complete sequence
          Length = 109027

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    atgttttcttattcctaaa 56
             |||||||||||||||||||
Sbjct: 25124 atgttttcttattcctaaa 25142
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>gb|AC098586.3| Homo sapiens BAC clone RP11-109F18 from 4, complete sequence
          Length = 150172

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    catgttttcttattcctaa 55
             |||||||||||||||||||
Sbjct: 26419 catgttttcttattcctaa 26437
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>gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 177267

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 40   gttttcttattcctaaaacatgg 62
            ||||||||||| |||||||||||
Sbjct: 9243 gttttcttatttctaaaacatgg 9265
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>emb|AL358913.4|CNS05TEE Human chromosome 14 DNA sequence BAC R-557C9 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 179862

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   tcttattcctaaaacatgg 62
            |||||||||||||||||||
Sbjct: 7805 tcttattcctaaaacatgg 7823
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>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete
              sequence
          Length = 226251

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     tttcttattcctaaaacat 60
              |||||||||||||||||||
Sbjct: 157188 tttcttattcctaaaacat 157206
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>emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-725G5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195835

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    tgttttcttattcctaaaa 57
             |||||||||||||||||||
Sbjct: 79039 tgttttcttattcctaaaa 79057
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>gb|AC127272.4| Mus musculus BAC clone RP24-63G5 from chromosome 18, complete sequence
          Length = 182591

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 42    tttcttattcctaaaaca 59
             ||||||||||||||||||
Sbjct: 18002 tttcttattcctaaaaca 18019
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>emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chromosome 16, complete
              sequence
          Length = 213704

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 36     gcatgttttcttattcct 53
              ||||||||||||||||||
Sbjct: 131816 gcatgttttcttattcct 131833
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>gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome 12, complete sequence
          Length = 238126

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 36     gcatgttttcttattcct 53
              ||||||||||||||||||
Sbjct: 148921 gcatgttttcttattcct 148938
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>gb|AC122027.1| Mus musculus BAC clone RP24-390L20 from 1, complete sequence
          Length = 150136

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    caagagcaagagtggtag 36
             ||||||||||||||||||
Sbjct: 88743 caagagcaagagtggtag 88760
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>ref|XM_652337.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
            (2.t00026) partial mRNA
          Length = 7368

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 39   tgttttcttattcctaaa 56
            ||||||||||||||||||
Sbjct: 3608 tgttttcttattcctaaa 3591
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>gb|AC092033.4| Homo sapiens BAC clone RP11-794I22 from 7, complete sequence
          Length = 218731

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 38    atgttttcttattcctaa 55
             ||||||||||||||||||
Sbjct: 26639 atgttttcttattcctaa 26622
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>gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, complete sequence
          Length = 190138

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 42     tttcttattcctaaaaca 59
              ||||||||||||||||||
Sbjct: 148345 tttcttattcctaaaaca 148362
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>emb|AL589941.6| Human DNA sequence from clone RP13-377P8 on chromosome 6, complete
            sequence
          Length = 80600

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 40   gttttcttattcctaaaa 57
            ||||||||||||||||||
Sbjct: 2182 gttttcttattcctaaaa 2165
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>emb|AL583882.6| Human DNA sequence from clone RP5-1098C18 on chromosome 1p36.23-36.33
             Contains GSSs, STSs and a CpG island, complete sequence
          Length = 90582

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 15    ctagcaagagcaagagtg 32
             ||||||||||||||||||
Sbjct: 50419 ctagcaagagcaagagtg 50436
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>emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chromosome 1 Contains the 3'
             end of the gene for lung type-I cell membrane-associated
             glycoprotein (T1A-2), a novel gene, the 5' end of the
             PRDM2 gene for PR domain containing 2 with ZNF domain and
             a CpG island, complete sequence
          Length = 111182

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 40    gttttcttattcctaaaa 57
             ||||||||||||||||||
Sbjct: 37640 gttttcttattcctaaaa 37657
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>emb|AL354802.15| Human DNA sequence from clone RP11-54O10 on chromosome 13 Contains part
              of the TRPC4 gene transient receptor potential cation
              channel, subfamily C, member 4, complete sequence
          Length = 171184

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 38     atgttttcttattcctaa 55
              ||||||||||||||||||
Sbjct: 106282 atgttttcttattcctaa 106265
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>gb|AC090154.19| Homo sapiens chromosome 8, clone RP11-705C3, complete sequence
          Length = 144615

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     agcaagagcaagagtggt 34
              ||||||||||||||||||
Sbjct: 104377 agcaagagcaagagtggt 104394
to top
>emb|AL008634.1|HS396D17 Human DNA sequence from clone RP3-396D17 on chromosome 1p33-35.3
             Contains EST, STS, GSS, complete sequence
          Length = 152592

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 29    agtggtagcatgttttct 46
             ||||||||||||||||||
Sbjct: 18697 agtggtagcatgttttct 18714
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>emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment
            9/11
          Length = 344249

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 32   ggtagcatgttttcttat 49
            ||||||||||||||||||
Sbjct: 3760 ggtagcatgttttcttat 3743
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>gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, complete sequence
          Length = 119922

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    gcaagagcaagagtggta 35
             ||||||||||||||||||
Sbjct: 91706 gcaagagcaagagtggta 91723
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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 42     tttcttattcctaaaaca 59
              ||||||||||||||||||
Sbjct: 124299 tttcttattcctaaaaca 124282
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>gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complete sequence
          Length = 132562

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 17     agcaagagcaagagtggtagca 38
              |||||||||||||| |||||||
Sbjct: 124962 agcaagagcaagagcggtagca 124941
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>gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complete sequence
          Length = 162214

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 38    atgttttcttattcctaa 55
             ||||||||||||||||||
Sbjct: 54954 atgttttcttattcctaa 54971
to top
>gb|AC120377.25| Mus musculus chromosome 3, clone RP24-262L5, complete sequence
          Length = 158004

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 43     ttcttattcctaaaacat 60
              ||||||||||||||||||
Sbjct: 104326 ttcttattcctaaaacat 104343
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>gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, complete sequence
          Length = 182140

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 43     ttcttattcctaaaacat 60
              ||||||||||||||||||
Sbjct: 174158 ttcttattcctaaaacat 174141
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 17      agcaagagcaagagtggt 34
               ||||||||||||||||||
Sbjct: 2238577 agcaagagcaagagtggt 2238594
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>gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, complete sequence
          Length = 184139

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 18   gcaagagcaagagtggta 35
            ||||||||||||||||||
Sbjct: 5901 gcaagagcaagagtggta 5918
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>gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161838

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 35    agcatgttttcttattcc 52
             ||||||||||||||||||
Sbjct: 95587 agcatgttttcttattcc 95570
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>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1123_E07
          Length = 113187

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    agcaagagcaagagtggt 34
             ||||||||||||||||||
Sbjct: 25526 agcaagagcaagagtggt 25543
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>emb|X06002.1|GGCAII4 G.gallus carbonic anhydrase II gene exon 4
          Length = 133

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 37 catgttttcttattccta 54
          ||||||||||||||||||
Sbjct: 2  catgttttcttattccta 19
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>gb|AC174474.1| Pan troglodytes chromosome X clone CH251-58H10 map human ortholog p11.4,
              complete sequence
          Length = 159881

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 42     tttcttattcctaaaaca 59
              ||||||||||||||||||
Sbjct: 120184 tttcttattcctaaaaca 120167
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>dbj|AP004957.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT34H20, TM0134,
             complete sequence
          Length = 132605

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                       
Query: 15    ctagcaagagcaagagtggtagcatg 40
             |||| |||||||||||||||| ||||
Sbjct: 96040 ctaggaagagcaagagtggtaacatg 96015
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>emb|AL732410.6| Mouse DNA sequence from clone RP23-91L2 on chromosome X, complete
            sequence
          Length = 220894

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 33   gtagcatgttttcttatt 50
            ||||||||||||||||||
Sbjct: 5761 gtagcatgttttcttatt 5778
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>emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chromosome X, complete
             sequence
          Length = 143387

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    tagcatgttttcttattc 51
             ||||||||||||||||||
Sbjct: 62192 tagcatgttttcttattc 62175
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>emb|AL732319.17| Mouse DNA sequence from clone RP23-180O4 on chromosome X, complete
             sequence
          Length = 151503

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 33    gtagcatgttttcttatt 50
             ||||||||||||||||||
Sbjct: 30071 gtagcatgttttcttatt 30088
to top
>emb|AL136998.36| Mouse DNA sequence from clone RP21-509E24 on chromosome X, complete
             sequence
          Length = 188218

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 33    gtagcatgttttcttatt 50
             ||||||||||||||||||
Sbjct: 34379 gtagcatgttttcttatt 34396
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>emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from 12 cosmids, map Xp21.1 region
              DXS709-SRPX, complete sequence
          Length = 337101

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 42     tttcttattcctaaaaca 59
              ||||||||||||||||||
Sbjct: 270797 tttcttattcctaaaaca 270780


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 643,201
Number of Sequences: 3902068
Number of extensions: 643201
Number of successful extensions: 49954
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49870
Number of HSP's gapped (non-prelim): 84
length of query: 62
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 41
effective length of database: 17,151,101,840
effective search space: 703195175440
effective search space used: 703195175440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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