ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast12c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 107 2e-20
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
3dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
4dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
5dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 2e-20
6dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 2e-20
7dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 2e-20
8emb|X60432.1|ZMPRP Z.mays PRP gene 78 2e-11
9gb|AY105001.1| Zea mays PCO123892 mRNA sequence 78 2e-11
10gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence 72 1e-09
11gb|AY094261.1| Zea mays cultivar C_9 proline rich protein, 3' UT... 66 8e-08
12gb|AY094260.1| Zea mays cultivar F_7 proline rich protein, 3' UT... 66 8e-08
13gb|AY094259.1| Zea mays cultivar D_9 proline rich protein, 3' UT... 66 8e-08
14gb|AY094258.1| Zea mays cultivar D_6 proline rich protein, 3' UT... 66 8e-08
15gb|AY094257.1| Zea mays cultivar F_1 proline rich protein, 3' UT... 66 8e-08
16gb|AY094256.1| Zea mays cultivar Mo17 proline rich protein, 3' U... 66 8e-08
17gb|AY094255.1| Zea mays cultivar D_7 proline rich protein, 3' UT... 66 8e-08
18gb|AY094254.1| Zea mays cultivar Wf9Ht proline rich protein, 3' ... 66 8e-08
19gb|AY094251.1| Zea mays cultivar B84 proline rich protein, 3' UT... 66 8e-08
20gb|AY094250.1| Zea mays cultivar H60 proline rich protein, 3' UT... 66 8e-08
21gb|AY094249.1| Zea mays cultivar DE811 proline rich protein, 3' ... 66 8e-08
22gb|AY094248.1| Zea mays cultivar 684 proline rich protein, 3' UT... 66 8e-08
23gb|AY094247.1| Zea mays cultivar D71-4HT proline rich protein, 3... 66 8e-08
24gb|AY094246.1| Zea mays cultivar H99 proline rich protein, 3' UT... 66 8e-08
25gb|AY094245.1| Zea mays cultivar IVANA proline rich protein, 3' ... 66 8e-08
26gb|AY094244.1| Zea mays cultivar CO109 proline rich protein, 3' ... 66 8e-08
27gb|AY094243.1| Zea mays cultivar I_1 proline rich protein, 3' UT... 66 8e-08
28gb|AY094242.1| Zea mays cultivar B73 proline rich protein, 3' UT... 66 8e-08
29gb|AY094241.1| Zea mays cultivar F_2 proline rich protein, 3' UT... 66 8e-08
30gb|AY094240.1| Zea mays cultivar G_1 proline rich protein, 3' UT... 66 8e-08
31gb|AY094239.1| Zea mays cultivar B_6 proline rich protein, 3' UT... 66 8e-08
32gb|AY094238.1| Zea mays cultivar H_4 proline rich protein, 3' UT... 66 8e-08
33gb|AY094237.1| Zea mays cultivar F_4 proline rich protein, 3' UT... 66 8e-08
34gb|AY094236.1| Zea mays cultivar F_3 proline rich protein, 3' UT... 66 8e-08
35gb|AY094235.1| Zea mays cultivar F_5 proline rich protein, 3' UT... 66 8e-08
36gb|AY094234.1| Zea mays cultivar H_5 proline rich protein, 3' UT... 66 8e-08
37gb|AY094233.1| Zea mays cultivar H_3 proline rich protein, 3' UT... 66 8e-08
38gb|AY094232.1| Zea mays cultivar J40 proline rich protein, 3' UT... 66 8e-08
39gb|AY094231.1| Zea mays cultivar 647 proline rich protein, 3' UT... 66 8e-08
40gb|AY094230.1| Zea mays cultivar B_1 proline rich protein, 3' UT... 66 8e-08
41gb|AY094229.1| Zea mays cultivar F_6 proline rich protein, 3' UT... 66 8e-08
42gb|AY094228.1| Zea mays cultivar C_5 proline rich protein, 3' UT... 66 8e-08
43gb|AY094227.1| Zea mays cultivar H_1 proline rich protein, 3' UT... 66 8e-08
44dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
45dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
46gb|AY105889.1| Zea mays PCO106909 mRNA sequence 62 1e-06
47emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chr... 48 0.018
48gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.28
49gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, comple... 42 1.1
50gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, com... 40 4.4
51gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete... 40 4.4
52gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 ma... 40 4.4
53gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosom... 40 4.4
54gb|DQ397636.1| Cenarchaeum symbiosum clone C07D10, complete sequ... 40 4.4
55gb|DQ397625.1| Cenarchaeum symbiosum clone C20B06, complete sequ... 40 4.4
56gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 4.4
57dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
58dbj|AK073019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
59gb|U70853.1| Caenorhabditis elegans cosmid M01H9, complete sequence 40 4.4
60gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49... 40 4.4
61gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complet... 40 4.4
62gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, co... 40 4.4
63emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4,... 40 4.4
64gb|AC005298.1|AC005298 Drosophila melanogaster DNA sequence (P1s... 40 4.4 
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 992

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 300
           |||||||| |||||||   ||||||||||||||||||||||||||||||  |||||| ||
Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 698

                                     
Query: 301 cgggaggtagatgttgatgttgagga 326
            |||||||||||||||||||||||||
Sbjct: 697 ggggaggtagatgttgatgttgagga 672
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                           
Query: 241     ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 300
               |||||||| |||||||   ||||||||||||||||||||||||||||||  |||||| ||
Sbjct: 3455048 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 3455107

                                         
Query: 301     cgggaggtagatgttgatgttgagga 326
                |||||||||||||||||||||||||
Sbjct: 3455108 ggggaggtagatgttgatgttgagga 3455133



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 263      gggtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttg 322
                |||| |||||||||||||| ||| ||| ||||||| |  || ||||||||||||||||||
Sbjct: 25844286 gggttcttgccgcaggtgaggaggagctggagcgcgaggggcaggtagatgttgatgttg 25844227

                    
Query: 323      agga 326
                ||||
Sbjct: 25844226 agga 25844223
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                         
Query: 241   ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 300
             |||||||| |||||||   ||||||||||||||||||||||||||||||  |||||| ||
Sbjct: 71752 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 71811

                                       
Query: 301   cgggaggtagatgttgatgttgagga 326
              |||||||||||||||||||||||||
Sbjct: 71812 ggggaggtagatgttgatgttgagga 71837
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                          
Query: 241    ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 300
              |||||||| |||||||   ||||||||||||||||||||||||||||||  |||||| ||
Sbjct: 146602 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 146661

                                        
Query: 301    cgggaggtagatgttgatgttgagga 326
               |||||||||||||||||||||||||
Sbjct: 146662 ggggaggtagatgttgatgttgagga 146687
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>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full
           insert sequence
          Length = 1013

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 300
           |||||||| |||||||   ||||||||||||||||||||||||||||||  |||||| ||
Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 698

                                     
Query: 301 cgggaggtagatgttgatgttgagga 326
            |||||||||||||||||||||||||
Sbjct: 697 ggggaggtagatgttgatgttgagga 672
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>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full
           insert sequence
          Length = 992

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 300
           |||||||| |||||||   ||||||||||||||||||||||||||||||  |||||| ||
Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 698

                                     
Query: 301 cgggaggtagatgttgatgttgagga 326
            |||||||||||||||||||||||||
Sbjct: 697 ggggaggtagatgttgatgttgagga 672
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>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full
            insert sequence
          Length = 1384

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 300
            |||||||| |||||||   ||||||||||||||||||||||||||||||  |||||| ||
Sbjct: 1174 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 1115

                                      
Query: 301  cgggaggtagatgttgatgttgagga 326
             |||||||||||||||||||||||||
Sbjct: 1114 ggggaggtagatgttgatgttgagga 1089
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>emb|X60432.1|ZMPRP Z.mays PRP gene
          Length = 1402

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 242  gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
            ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 1010 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 951

                                   
Query: 302  gggaggtagatgttgatgttgag 324
            |||||||||||||||||||||||
Sbjct: 950  gggaggtagatgttgatgttgag 928
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>gb|AY105001.1| Zea mays PCO123892 mRNA sequence
          Length = 1144

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 671 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 612

                                  
Query: 302 gggaggtagatgttgatgttgag 324
           |||||||||||||||||||||||
Sbjct: 611 gggaggtagatgttgatgttgag 589
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>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence
          Length = 1282

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 265 gtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttgag 324
           ||||||||||||||||||||||||   |||||| |  |||||||||||||||||||||||
Sbjct: 861 gtgcttgccgcaggtgatgagcaggttgagcgcgatggggaggtagatgttgatgttgag 802
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>gb|AY094261.1| Zea mays cultivar C_9 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
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>gb|AY094260.1| Zea mays cultivar F_7 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
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>gb|AY094259.1| Zea mays cultivar D_9 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
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>gb|AY094258.1| Zea mays cultivar D_6 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
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>gb|AY094257.1| Zea mays cultivar F_1 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
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>gb|AY094256.1| Zea mays cultivar Mo17 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
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>gb|AY094255.1| Zea mays cultivar D_7 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
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>gb|AY094254.1| Zea mays cultivar Wf9Ht proline rich protein, 3' UTR and partial
           cds
          Length = 297

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 221 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 280

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 281 gggaggtagatgttgat 297
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>gb|AY094251.1| Zea mays cultivar B84 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
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>gb|AY094250.1| Zea mays cultivar H60 proline rich protein, 3' UTR and partial cds
          Length = 303

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 227 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 286

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 287 gggaggtagatgttgat 303
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>gb|AY094249.1| Zea mays cultivar DE811 proline rich protein, 3' UTR and partial
           cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
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>gb|AY094248.1| Zea mays cultivar 684 proline rich protein, 3' UTR and partial cds
          Length = 313

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 237 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 296

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 297 gggaggtagatgttgat 313
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>gb|AY094247.1| Zea mays cultivar D71-4HT proline rich protein, 3' UTR and partial
           cds
          Length = 307

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 231 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 290

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 291 gggaggtagatgttgat 307
to top
>gb|AY094246.1| Zea mays cultivar H99 proline rich protein, 3' UTR and partial cds
          Length = 307

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 231 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 290

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 291 gggaggtagatgttgat 307
to top
>gb|AY094245.1| Zea mays cultivar IVANA proline rich protein, 3' UTR and partial
           cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
to top
>gb|AY094244.1| Zea mays cultivar CO109 proline rich protein, 3' UTR and partial
           cds
          Length = 303

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 227 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 286

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 287 gggaggtagatgttgat 303
to top
>gb|AY094243.1| Zea mays cultivar I_1 proline rich protein, 3' UTR and partial cds
          Length = 305

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 229 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 288

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 289 gggaggtagatgttgat 305
to top
>gb|AY094242.1| Zea mays cultivar B73 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094241.1| Zea mays cultivar F_2 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094240.1| Zea mays cultivar G_1 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094239.1| Zea mays cultivar B_6 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
to top
>gb|AY094238.1| Zea mays cultivar H_4 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
to top
>gb|AY094237.1| Zea mays cultivar F_4 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094236.1| Zea mays cultivar F_3 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094235.1| Zea mays cultivar F_5 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094234.1| Zea mays cultivar H_5 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094233.1| Zea mays cultivar H_3 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094232.1| Zea mays cultivar J40 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094231.1| Zea mays cultivar 647 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094230.1| Zea mays cultivar B_1 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
to top
>gb|AY094229.1| Zea mays cultivar F_6 proline rich protein, 3' UTR and partial cds
          Length = 314

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 298 gggaggtagatgttgat 314
to top
>gb|AY094228.1| Zea mays cultivar C_5 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>gb|AY094227.1| Zea mays cultivar H_1 proline rich protein, 3' UTR and partial cds
          Length = 315

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 242 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 301
           ||||||||||||||    |||| ||||||||||||||||||||||||   |||||| |  
Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298

                            
Query: 302 gggaggtagatgttgat 318
           |||||||||||||||||
Sbjct: 299 gggaggtagatgttgat 315
to top
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                          
Query: 263    gggtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttg 322
              |||| |||||||||||||| ||| ||| ||||||| |  || ||||||||||||||||||
Sbjct: 126490 gggttcttgccgcaggtgaggaggagctggagcgcgaggggcaggtagatgttgatgttg 126431

                  
Query: 323    agga 326
              ||||
Sbjct: 126430 agga 126427
to top
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full
           insert sequence
          Length = 1338

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 263 gggtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttg 322
           |||| |||||||||||||| ||| ||| ||||||| |  || ||||||||||||||||||
Sbjct: 831 gggttcttgccgcaggtgaggaggagctggagcgcgaggggcaggtagatgttgatgttg 772

               
Query: 323 agga 326
           ||||
Sbjct: 771 agga 768
to top
>gb|AY105889.1| Zea mays PCO106909 mRNA sequence
          Length = 1420

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 268 cttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttgagga 326
           |||||||||||||| ||| ||| |||||||||  || ||||||| ||||||||||||||
Sbjct: 929 cttgccgcaggtgaggaggagctggagcgccagtggcaggtagaggttgatgttgagga 871
to top
>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete
              sequence
          Length = 215366

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 205    catgcaggctaggctaggctaggc 228
              ||||||||||||||||||||||||
Sbjct: 139579 catgcaggctaggctaggctaggc 139602
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 261     gcgggtgcttgccgcaggtgat 282
               ||||||||||||||||||||||
Sbjct: 2594989 gcgggtgcttgccgcaggtgat 2595010
to top
>gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, complete sequence
          Length = 148332

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   ggtagatgttgatgttgagga 326
             |||||||||||||||||||||
Sbjct: 94037 ggtagatgttgatgttgagga 94057
to top
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence
          Length = 210979

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    aggctaggctaggctaggcg 229
              ||||||||||||||||||||
Sbjct: 136589 aggctaggctaggctaggcg 136570
to top
>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence
          Length = 170718

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   caggctaggctaggctaggc 228
             ||||||||||||||||||||
Sbjct: 59390 caggctaggctaggctaggc 59409
to top
>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence
          Length = 191014

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   caggctaggctaggctaggc 228
             ||||||||||||||||||||
Sbjct: 72803 caggctaggctaggctaggc 72822
to top
>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence
          Length = 210014

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    caggctaggctaggctaggc 228
              ||||||||||||||||||||
Sbjct: 101172 caggctaggctaggctaggc 101191
to top
>gb|DQ397636.1| Cenarchaeum symbiosum clone C07D10, complete sequence
          Length = 36261

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ttgggcgggtgcttgccgca 276
             ||||||||||||||||||||
Sbjct: 27616 ttgggcgggtgcttgccgca 27597
to top
>gb|DQ397625.1| Cenarchaeum symbiosum clone C20B06, complete sequence
          Length = 45713

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ttgggcgggtgcttgccgca 276
             ||||||||||||||||||||
Sbjct: 24144 ttgggcgggtgcttgccgca 24125
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 243     ggcactggaagccgttgggcgggt 266
               |||||||||| |||||||||||||
Sbjct: 1223748 ggcactggaatccgttgggcgggt 1223771
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      caggctaggctaggctaggc 228
                ||||||||||||||||||||
Sbjct: 22247461 caggctaggctaggctaggc 22247480
to top
>dbj|AK073019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150A21, full
           insert sequence
          Length = 2797

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 caggctaggctaggctaggc 228
           ||||||||||||||||||||
Sbjct: 508 caggctaggctaggctaggc 489
to top
>gb|U70853.1| Caenorhabditis elegans cosmid M01H9, complete sequence
          Length = 30522

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aggctaggctaggctaggcg 229
            ||||||||||||||||||||
Sbjct: 7054 aggctaggctaggctaggcg 7073
to top
>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete
              sequence
          Length = 254899

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    caggctaggctaggctaggc 228
              ||||||||||||||||||||
Sbjct: 136512 caggctaggctaggctaggc 136531
to top
>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence
          Length = 158922

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   aggctaggctaggctaggcg 229
             ||||||||||||||||||||
Sbjct: 93297 aggctaggctaggctaggcg 93316
to top
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence
          Length = 215708

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aggctaggctaggctaggcg 229
             ||||||||||||||||||||
Sbjct: 12874 aggctaggctaggctaggcg 12855
to top
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
              complete sequence
          Length = 118959

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    caggctaggctaggctaggc 228
              ||||||||||||||||||||
Sbjct: 117322 caggctaggctaggctaggc 117341
to top
>gb|AC005298.1|AC005298 Drosophila melanogaster DNA sequence (P1s DS04841 (D188) and DS08189
             (D218)), complete sequence
          Length = 95272

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   caggctaggctaggctaggc 228
             ||||||||||||||||||||
Sbjct: 35614 caggctaggctaggctaggc 35633


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,865,554
Number of Sequences: 3902068
Number of extensions: 1865554
Number of successful extensions: 33771
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33544
Number of HSP's gapped (non-prelim): 177
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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