>R1_ARATH (Q9SAC6) Alpha-glucan water dikinase, chloroplast precursor (EC|
           2.7.9.4) (Starch-related R1 protein) (Starch excess
           protein 1)
          Length = 1399

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +3

Query: 3   ALSKERRQWTSSPPDLIIPGAAVL--VVDTRMLYTSTQLMFPL 125
           ALS++  +W   P D++ P +  +   VDT++  TST L  P+
Sbjct: 397 ALSQKGGEWLDPPSDILPPNSLPVRGAVDTKLTITSTDLPSPV 439

>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)|
          Length = 366

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 88  ECYTPPPN*CSLCPXXXXXXXXXXGAVGAVAA 183
           EC+ PPP  C  CP          GA GA  A
Sbjct: 25  ECFYPPPPTCPTCPAGPPGAPGPQGAPGAPGA 56

>PSY_NARPS (P53797) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)|
          Length = 423

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 12/65 (18%)
 Frame = +3

Query: 9   SKERRQWTSSPPDLIIPGAAVLVVD------------TRMLYTSTQLMFPLPKTTMPAAM 152
           +K  R+ T   PD+++PG   L+ D             +  Y  T LM P  +  +  A+
Sbjct: 103 TKSSRKSTDVKPDIVLPGTVYLLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAI-WAI 161

Query: 153 TPWCR 167
             WCR
Sbjct: 162 YVWCR 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,648,703
Number of Sequences: 219361
Number of extensions: 416582
Number of successful extensions: 1427
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 80,573,946
effective HSP length: 36
effective length of database: 72,676,950
effective search space used: 1744246800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)