ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast10e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.037
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.037
3emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 44 0.15
4gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.15
5ref|XM_360433.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 0.58
6ref|XM_956758.1| Neurospora crassa OR74A hypothetical protein (N... 42 0.58
7ref|XM_324544.1| Neurospora crassa OR74A hypothetical protein (N... 42 0.58
8emb|BX908810.1| Neurospora crassa DNA linkage group IV Cosmid co... 42 0.58
9gb|AF295692.1| Anopheles gambiae Ty1-copia retrotransposon Salto... 42 0.58
10gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 2.3
11gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 2.3
12ref|XM_370254.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 2.3
13ref|XM_447059.1| Candida glabrata CBS138, CAGL0H06039g partial mRNA 40 2.3
14ref|XM_793427.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 2.3
15emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 2.3
16emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 40 2.3
17emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 40 2.3
18gb|AF173961.1|AF173961 Thauera aromatica bbs operon, complete se... 40 2.3
19dbj|AK215279.1| Mus musculus cDNA, clone:Y2G0134I11, strand:minu... 40 2.3
20dbj|AK107264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.3
21emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 2.3
22emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chro... 40 2.3
23gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, p... 38 9.1
24ref|NM_193638.1| Oryza sativa (japonica cultivar-group), predic... 38 9.1
25gb|AC157564.11| Mus musculus chromosome 8, clone RP23-363J16, co... 38 9.1
26gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 9.1
27ref|XM_362038.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 9.1
28gb|AE009056.1| Agrobacterium tumefaciens str. C58 circular chrom... 38 9.1
29ref|XM_709350.1| Candida albicans SC5314 putative translation in... 38 9.1
30gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, com... 38 9.1
31emb|AL353660.11| Human DNA sequence from clone RP11-459P23 on ch... 38 9.1
32emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 38 9.1
33emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 38 9.1
34emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 9.1
35emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC... 38 9.1
36emb|AJ511784.1|FRU511784 Takifugu rubripes partial fjun gene 38 9.1
37gb|AC116428.1| Homo sapiens chromosome 5 clone CTD-2587M2, compl... 38 9.1
38gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 38 9.1
39gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasm... 38 9.1
40gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 9.1
41dbj|AK076396.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 38 9.1
42gb|AC158609.10| Mus musculus 6 BAC RP24-89F5 (Roswell Park Cance... 38 9.1
43dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
44gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, comple... 38 9.1
45gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome ... 38 9.1
46dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
47dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
48gb|AC114921.5| Mus musculus BAC clone RP23-202P9 from 6, complet... 38 9.1 
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 46.1 bits (23), Expect = 0.037
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 75    gtagtagatacaagaatgctatacacc 101
             ||||||||||||| |||||||||||||
Sbjct: 32821 gtagtagatacaacaatgctatacacc 32795
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.037
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 75       gtagtagatacaagaatgctatacacc 101
                ||||||||||||| |||||||||||||
Sbjct: 22443414 gtagtagatacaacaatgctatacacc 22443388
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 162    tgccgttggtgccgttgccgcg 183
              ||||||||||||||||||||||
Sbjct: 232631 tgccgttggtgccgttgccgcg 232652
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 160     ggtgccgttggtgccgttgccg 181
               ||||||||||||||||||||||
Sbjct: 1631482 ggtgccgttggtgccgttgccg 1631461
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>ref|XM_360433.1| Magnaporthe grisea 70-15 hypothetical protein (MG10745.4) partial
           mRNA
          Length = 1641

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 159 tggtgccgttggtgccgttgc 179
           |||||||||||||||||||||
Sbjct: 70  tggtgccgttggtgccgttgc 50
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>ref|XM_956758.1| Neurospora crassa OR74A hypothetical protein (NCU05188.1) partial
           mRNA
          Length = 2262

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                        
Query: 151 tgacgccgt-ggtgccgttggtgccgttg 178
           ||||||||| |||||||||||||||||||
Sbjct: 112 tgacgccgttggtgccgttggtgccgttg 84
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>ref|XM_324544.1| Neurospora crassa OR74A hypothetical protein (NCU05188.1) partial
           mRNA
          Length = 2262

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                        
Query: 151 tgacgccgt-ggtgccgttggtgccgttg 178
           ||||||||| |||||||||||||||||||
Sbjct: 112 tgacgccgttggtgccgttggtgccgttg 84
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>emb|BX908810.1| Neurospora crassa DNA linkage group IV Cosmid contig G3C5
          Length = 70104

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 151   tgacgccgt-ggtgccgttggtgccgttg 178
             ||||||||| |||||||||||||||||||
Sbjct: 31980 tgacgccgttggtgccgttggtgccgttg 31952
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>gb|AF295692.1| Anopheles gambiae Ty1-copia retrotransposon Salto 23 sequence
          Length = 2806

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 118 tccctttgcccaagacgacgatgcc 142
           ||||| |||||||||||||||||||
Sbjct: 845 tccctgtgcccaagacgacgatgcc 821
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    cgacgatgccggcggcaatg 152
              ||||||||||||||||||||
Sbjct: 460060 cgacgatgccggcggcaatg 460079
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 158     gtggtgccgttggtgccgttgccg 181
               ||||||||| ||||||||||||||
Sbjct: 3990229 gtggtgccggtggtgccgttgccg 3990206
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>ref|XM_370254.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
           (MG06751.4) partial mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 ggtgccgttggtgccgttgc 179
           ||||||||||||||||||||
Sbjct: 636 ggtgccgttggtgccgttgc 617
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>ref|XM_447059.1| Candida glabrata CBS138, CAGL0H06039g partial mRNA
          Length = 1770

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 gccgttggtgccgttgccgc 182
           ||||||||||||||||||||
Sbjct: 826 gccgttggtgccgttgccgc 845
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>ref|XM_793427.1| PREDICTED: Strongylocentrotus purpuratus similar to Fras1 related
            extracellular matrix protein 1 (LOC593973), partial mRNA
          Length = 6180

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctcaccaccggatctcatca 54
            ||||||||||||||||||||
Sbjct: 4704 ctcaccaccggatctcatca 4723
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 162     tgccgttggtgccgttgccg 181
               ||||||||||||||||||||
Sbjct: 1125427 tgccgttggtgccgttgccg 1125446
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gccgttggtgccgttgccgc 182
              ||||||||||||||||||||
Sbjct: 593470 gccgttggtgccgttgccgc 593451
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>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    gtgccgttggtgccgttgccgcgc 184
              |||||||||||||||| |||||||
Sbjct: 338424 gtgccgttggtgccgtcgccgcgc 338447
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>gb|AF173961.1|AF173961 Thauera aromatica bbs operon, complete sequence and unknown genes
          Length = 9349

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  tgccgttggtgccgttgccg 181
            ||||||||||||||||||||
Sbjct: 1250 tgccgttggtgccgttgccg 1231
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>dbj|AK215279.1| Mus musculus cDNA, clone:Y2G0134I11, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000028341, based on BLAT search
          Length = 187

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 ccaactgatgttccctttgc 126
           ||||||||||||||||||||
Sbjct: 17  ccaactgatgttccctttgc 36
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>dbj|AK107264.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H04, full
            insert sequence
          Length = 1627

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  tgccgttggtgccgttgccg 181
            ||||||||||||||||||||
Sbjct: 1300 tgccgttggtgccgttgccg 1281
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 136     cgatgccggcggcaatgacg 155
               ||||||||||||||||||||
Sbjct: 2736653 cgatgccggcggcaatgacg 2736672
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>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete
             sequence
          Length = 205589

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    ggtagtagatacaagaatgc 93
             ||||||||||||||||||||
Sbjct: 79889 ggtagtagatacaagaatgc 79908
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>gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, partial sequence
          Length = 190912

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 137    gatgccggcggcaatgacg 155
              |||||||||||||||||||
Sbjct: 126491 gatgccggcggcaatgacg 126509
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>ref|NM_193638.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 291

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 130 agacgacgatgccggcggc 148
           |||||||||||||||||||
Sbjct: 56  agacgacgatgccggcggc 74
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>gb|AC157564.11| Mus musculus chromosome 8, clone RP23-363J16, complete sequence
          Length = 216585

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     gcagcagtactggtagtag 81
              |||||||||||||||||||
Sbjct: 151514 gcagcagtactggtagtag 151532
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 163    gccgttggtgccgttgccg 181
              |||||||||||||||||||
Sbjct: 930002 gccgttggtgccgttgccg 930020



 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 163    gccgttggtgccgttgccg 181
              |||||||||||||||||||
Sbjct: 338773 gccgttggtgccgttgccg 338791
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>ref|XM_362038.1| Magnaporthe grisea 70-15 hypothetical protein (MG04483.4) partial
           cds
          Length = 1086

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 166 gttggtgccgttgccgcgc 184
           |||||||||||||||||||
Sbjct: 378 gttggtgccgttgccgcgc 360
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>gb|AE009056.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 82 of
            256 of the complete sequence
          Length = 10229

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 133  cgacgatgccggcggcaatgacg 155
            |||| ||||||||||||||||||
Sbjct: 2366 cgaccatgccggcggcaatgacg 2388
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>ref|XM_709350.1| Candida albicans SC5314 putative translation initiation factor
            subunit eIF4G (CaO19.3599), mRNA
          Length = 3255

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 96   tacacctccacccaactgatgtt 118
            ||||||||||||||| |||||||
Sbjct: 2973 tacacctccacccaattgatgtt 2951
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>gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, complete sequence
          Length = 204724

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 111    ctgatgttccctttgccca 129
              |||||||||||||||||||
Sbjct: 171764 ctgatgttccctttgccca 171746
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>emb|AL353660.11| Human DNA sequence from clone RP11-459P23 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 129241

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   ctgatgttccctttgccca 129
             |||||||||||||||||||
Sbjct: 96239 ctgatgttccctttgccca 96221
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>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 163    gccgttggtgccgttgccg 181
              |||||||||||||||||||
Sbjct: 245829 gccgttggtgccgttgccg 245847
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>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 163    gccgttggtgccgttgccg 181
              |||||||||||||||||||
Sbjct: 338711 gccgttggtgccgttgccg 338729
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 163    gccgttggtgccgttgccg 181
              |||||||||||||||||||
Sbjct: 263851 gccgttggtgccgttgccg 263869
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>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome
             5 of Podospora anserina
          Length = 156244

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 159   tggtgccgttggtgccgtt 177
             |||||||||||||||||||
Sbjct: 46732 tggtgccgttggtgccgtt 46714
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>emb|AJ511784.1|FRU511784 Takifugu rubripes partial fjun gene
          Length = 4050

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 97   acacctccacccaactgat 115
            |||||||||||||||||||
Sbjct: 2183 acacctccacccaactgat 2165
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>gb|AC116428.1| Homo sapiens chromosome 5 clone CTD-2587M2, complete sequence
          Length = 153204

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     agctctcagcaaggagaga 20
             |||||||||||||||||||
Sbjct: 88548 agctctcagcaaggagaga 88566
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 133    cgacgatgccggcggcaatgacg 155
              |||| ||||||||||||||||||
Sbjct: 897844 cgaccatgccggcggcaatgacg 897866
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>gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence
          Length = 371254

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   gatgccggcggcaatgacg 155
             |||||||||||||||||||
Sbjct: 70401 gatgccggcggcaatgacg 70383
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 157     cgtggtgccgttggtgccgttgc 179
               |||||||||| ||||||||||||
Sbjct: 4996181 cgtggtgccgatggtgccgttgc 4996203
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>dbj|AK076396.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732490P12 product:unclassifiable, full
            insert sequence
          Length = 3553

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 63   gcagcagtactggtagtag 81
            |||||||||||||||||||
Sbjct: 2813 gcagcagtactggtagtag 2795
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>gb|AC158609.10| Mus musculus 6 BAC RP24-89F5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 217329

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 111    ctgatgttccctttgccca 129
              |||||||||||||||||||
Sbjct: 139614 ctgatgttccctttgccca 139632
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 130      agacgacgatgccggcggc 148
                |||||||||||||||||||
Sbjct: 22332451 agacgacgatgccggcggc 22332469
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>gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, complete sequence
          Length = 109568

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   cctccacccaactgatgtt 118
             |||||||||||||||||||
Sbjct: 82369 cctccacccaactgatgtt 82387
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>gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome 9, complete sequence
          Length = 247708

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 111    ctgatgttccctttgccca 129
              |||||||||||||||||||
Sbjct: 245326 ctgatgttccctttgccca 245344
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>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013G02
          Length = 163419

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 130   agacgacgatgccggcggc 148
             |||||||||||||||||||
Sbjct: 29721 agacgacgatgccggcggc 29739
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>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0022F12
          Length = 137716

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 130    agacgacgatgccggcggc 148
              |||||||||||||||||||
Sbjct: 114930 agacgacgatgccggcggc 114948
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>gb|AC114921.5| Mus musculus BAC clone RP23-202P9 from 6, complete sequence
          Length = 207908

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   ctgatgttccctttgccca 129
             |||||||||||||||||||
Sbjct: 13123 ctgatgttccctttgccca 13105


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,146,349
Number of Sequences: 3902068
Number of extensions: 1146349
Number of successful extensions: 82779
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81636
Number of HSP's gapped (non-prelim): 1140
length of query: 184
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 162
effective length of database: 17,147,199,772
effective search space: 2777846363064
effective search space used: 2777846363064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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